FFCP PHASE1:Hg19::chr19:39898400..39898420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39898400..39898420,+ | |||
|coexpression_cluster_id=C2211 | |coexpression_cluster_id=C2211 | ||
|description=CAGE_peak_at_chr19:39898400..39898420,+ | |description=CAGE_peak_at_chr19:39898400..39898420,+ | ||
|id=chr19:39898400..39898420,+ | |id=chr19:39898400..39898420,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.08e-35!140;CL:0002031!5.80e-28!124;CL:0002057!1.43e-27!42;CL:0002087!4.11e-27!119;CL:0000037!1.13e-25!172;CL:0000566!1.13e-25!172;CL:0000860!2.90e-25!45;CL:0002032!1.91e-23!165;CL:0000837!1.91e-23!165;CL:0000988!2.58e-23!182;CL:0000766!5.00e-23!76;CL:0000557!5.74e-20!71;CL:0002009!2.27e-18!65;CL:0000839!1.20e-17!70;CL:0002194!5.45e-17!63;CL:0000576!5.45e-17!63;CL:0000040!5.45e-17!63;CL:0000559!5.45e-17!63;CL:0000763!1.83e-14!112;CL:0000049!1.83e-14!112;CL:0000838!3.06e-09!52;CL:0000542!7.81e-09!53;CL:0000051!7.81e-09!53;CL:0000094!3.47e-07!8;CL:0002393!4.80e-07!9;CL:0002397!4.80e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.08e-35!140;CL:0002031!5.80e-28!124;CL:0002057!1.43e-27!42;CL:0002087!4.11e-27!119;CL:0000037!1.13e-25!172;CL:0000566!1.13e-25!172;CL:0000860!2.90e-25!45;CL:0002032!1.91e-23!165;CL:0000837!1.91e-23!165;CL:0000988!2.58e-23!182;CL:0000766!5.00e-23!76;CL:0000557!5.74e-20!71;CL:0002009!2.27e-18!65;CL:0000839!1.20e-17!70;CL:0002194!5.45e-17!63;CL:0000576!5.45e-17!63;CL:0000040!5.45e-17!63;CL:0000559!5.45e-17!63;CL:0000763!1.83e-14!112;CL:0000049!1.83e-14!112;CL:0000838!3.06e-09!52;CL:0000542!7.81e-09!53;CL:0000051!7.81e-09!53;CL:0000094!3.47e-07!8;CL:0002393!4.80e-07!9;CL:0002397!4.80e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-29;33!CL:0002057;2.17e-29;33!CL:0000473;9.85e-21;39!CL:0000234;9.85e-21;39!CL:0000576;1.00e-20;48!CL:0000766;1.13e-19;69!CL:0000094;1.79e-13;8!CL:0002087;2.27e-13;104!CL:0000738;1.58e-11;136!CL:0000624;3.84e-11;6!CL:0000081;2.44e-09;11!CL:0000763;1.03e-08;100!CL:0000791;1.61e-08;18!CL:0000789;1.61e-08;18!CL:0002419;1.61e-08;18!CL:0002393;8.12e-08;6!CL:0002397;8.12e-08;6!CL:0000236;1.54e-07;13!CL:0000784;4.47e-07;3!CL:0000988;4.52e-07;177!CL:0000542;6.61e-07;53!CL:0000623;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.57e-55,136;CL:0000037,5.90e-42,168;CL:0000860,3.28e-40,42;CL:0002057,3.28e-40,42;CL:0002031,3.84e-40,120;CL:0000766,4.06e-40,72;CL:0000988,1.04e-38,177;CL:0002087,1.46e-38,115;CL:0002032,6.96e-37,161;CL:0000837,6.96e-37,161;CL:0000557,7.43e-34,67;CL:0000473,8.59e-34,48;CL:0000234,8.59e-34,48;CL:0002009,1.40e-29,61;CL:0000839,1.39e-28,66;CL:0002194,7.92e-27,59;CL:0000576,7.92e-27,59;CL:0000040,7.92e-27,59;CL:0000559,7.92e-27,59;CL:0000763,2.68e-26,108;CL:0000049,2.68e-26,108;CL:0000094,1.66e-13,8;CL:0000134,4.56e-13,354;CL:0002320,2.08e-12,361;CL:0000624,3.49e-11,6;CL:0000219,4.04e-10,386;CL:0000838,5.35e-10,52;CL:0000542,1.06e-09,53;CL:0000051,1.06e-09,53;CL:0000081,2.32e-09,11;CL:0002393,9.53e-09,9;CL:0002397,9.53e-09,9;CL:0000791,1.52e-08,18;CL:0000789,1.52e-08,18;CL:0002420,1.52e-08,18;CL:0002419,1.52e-08,18;CL:0000790,1.52e-08,18;CL:0000034,5.82e-08,441;CL:0000048,6.42e-08,427;CL:0000723,1.53e-07,433;CL:0000784,4.46e-07,3;CL:0000623,7.19e-07,3;CL:0000825,7.19e-07,3;CL:0000236,8.26e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-28;42!CL:0000790;1.61e-08;18!CL:0000049;5.44e-07;108!CL:0000051;6.61e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-18!102;UBERON:0003061!1.19e-18!102;UBERON:0002371!1.38e-16!80;UBERON:0002193!1.63e-16!112;UBERON:0001474!7.83e-15!86;UBERON:0004765!1.13e-12!101;UBERON:0001434!1.13e-12!101;UBERON:0002405!1.14e-11!115 | |ontology_enrichment_uberon=UBERON:0002390!1.19e-18!102;UBERON:0003061!1.19e-18!102;UBERON:0002371!1.38e-16!80;UBERON:0002193!1.63e-16!112;UBERON:0001474!7.83e-15!86;UBERON:0004765!1.13e-12!101;UBERON:0001434!1.13e-12!101;UBERON:0002405!1.14e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-28,76;UBERON:0001474,7.43e-27,82;UBERON:0002390,5.33e-26,98;UBERON:0003061,5.33e-26,98;UBERON:0004765,2.38e-23,90;UBERON:0002193,2.52e-22,108;UBERON:0002405,2.81e-22,93;UBERON:0001434,8.92e-20,100;UBERON:0002384,1.62e-11,371;UBERON:0003081,6.91e-10,203;UBERON:0002204,1.28e-08,167 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,1.57345710739562,1.15148819429164,3.09632246632152,0.919421224478927,0,0,0.0774672005803016,0,0,5.53995408531877,5.21415563422368,9.54847831149748,0,0,0.257575567634187,1.01778767145695,0.755751887377619,0.970336244751265,1.39457422143411,1.6446715520873,2.78735733805593,3.16461631554365,3.84241059793651,0.945928919554341,4.48169384957604,4.51839278508678,1.35426486594342,1.88242339542605,0.545812300115692,0.898893937780338,4.59125838556354,4.17207735198922,2.55734850319616,2.30895910130701,1.59570926097305,1.70489900213078,2.32167390902867,1.13477044938228,3.11411124497787,3.76872997885115,3.65038042894141,1.95469960234605,3.63239701580021,1.84138817993782,2.84816148696796,2.5350634357433,1.4882300997553,0.838634582033504,1.12328631146495,1.20141514273205,1.12507910687956,1.14005097496499,1.19350006319454,0.547992461293902,0,1.09227722252426,0.889509253863555,1.70692089026603,1.20118796110804,1.14950487990897,0,3.81621501814146,7.39976859842283,10.5702694086769,11.8504700718821,3.96513985737078,1.68152568894461,0.526768169550154,3.93419540227666,6.28817220398664,6.16804496998528,1.67186495390678,2.60737813306872,3.31413464014313,1.94826728407911,1.89397776704795,2.94605907474837,3.54454231333794,3.79125409271022,2.17755243533648,2.73124629875744,0.986627427622057,0.552700035571697,0.579606171470105,1.33457906845854,1.07016331235885,1.04535523804977,0.566546713487831,3.06576394881537,3.09264700934367,2.53019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,1.24930726552346,0.947109008176067,0,6.45141578319144,5.88368430723716,3.76543450095277,7.31420598941885,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0.132957960518865,6.43924685624423,8.00792875092179,8.17206502925043,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,19.074186629751,13.5472756211944,10.8568492746687,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,7.09310736726938,4.52817907204986,4.74869234235069,0,0,0,0,0,2.99602809578873,2.99161459204025,3.72973962092432,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,3.51505644408909,2.80428461064202,4.37582986994122,0.303127571446259,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.276242966807689,0,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0,0.330569830721956,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,1.22520107990516,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.557216921387392,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0.494411622680279,0,1.59398390600856,1.65770349318689,0.251932747854276,0,0.123084805461069,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0.185536196323703,0,0,0.437299999980979,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0.113942055847001,0,0,0,0.31900115973192,0,2.13213910407454,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.530745387020035,1.22206028986725,0.889563386041866,0,0,0.269604531922708,2.40773294189637,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0.0967563312890851,0,0,0.775912131907355,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0,0.400794101257669,1.70762395791482,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0.600420288709789,0,2.55493176133945,0,0.262887354279314,1.11712960508902,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0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| ||
|short_description=p@chr19:39898400..39898420,+ | |short_description=p@chr19:39898400..39898420,+ | ||
}} | }} |
Latest revision as of 07:36, 26 July 2015
Short description: | p@chr19:39898400..39898420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39898400..39898420, + |
Coexpression cluster: | C2211_Mast_CD19_CD34_Dendritic_immature_Peripheral_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-28 | 76 |
bone element | 7.43e-27 | 82 |
hematopoietic system | 5.33e-26 | 98 |
blood island | 5.33e-26 | 98 |
skeletal element | 2.38e-23 | 90 |
hemolymphoid system | 2.52e-22 | 108 |
immune system | 2.81e-22 | 93 |
skeletal system | 8.92e-20 | 100 |
connective tissue | 1.62e-11 | 371 |
lateral plate mesoderm | 6.91e-10 | 203 |
musculoskeletal system | 1.28e-08 | 167 |