FFCP PHASE1:Hg19::chr19:39900896..39900918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39900896..39900918,+ | |||
|coexpression_cluster_id=C3787 | |coexpression_cluster_id=C3787 | ||
|description=CAGE_peak_at_chr19:39900896..39900918,+ | |description=CAGE_peak_at_chr19:39900896..39900918,+ | ||
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|ontology_enrichment_celltype=CL:0000738!2.32e-26!140;CL:0002057!3.29e-20!42;CL:0000860!3.62e-20!45;CL:0002087!4.02e-20!119;CL:0002031!1.37e-19!124;CL:0000037!3.89e-19!172;CL:0000566!3.89e-19!172;CL:0002032!1.61e-17!165;CL:0000837!1.61e-17!165;CL:0000988!3.95e-17!182;CL:0000766!1.52e-15!76;CL:0000557!9.81e-12!71;CL:0002009!4.12e-11!65;CL:0000839!2.24e-10!70;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000763!2.55e-09!112;CL:0000049!2.55e-09!112;CL:0000542!7.29e-09!53;CL:0000051!7.29e-09!53;CL:0000838!9.57e-09!52;CL:0000094!2.87e-07!8;CL:0000134!2.97e-07!358;CL:0002320!7.77e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.32e-26!140;CL:0002057!3.29e-20!42;CL:0000860!3.62e-20!45;CL:0002087!4.02e-20!119;CL:0002031!1.37e-19!124;CL:0000037!3.89e-19!172;CL:0000566!3.89e-19!172;CL:0002032!1.61e-17!165;CL:0000837!1.61e-17!165;CL:0000988!3.95e-17!182;CL:0000766!1.52e-15!76;CL:0000557!9.81e-12!71;CL:0002009!4.12e-11!65;CL:0000839!2.24e-10!70;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000763!2.55e-09!112;CL:0000049!2.55e-09!112;CL:0000542!7.29e-09!53;CL:0000051!7.29e-09!53;CL:0000838!9.57e-09!52;CL:0000094!2.87e-07!8;CL:0000134!2.97e-07!358;CL:0002320!7.77e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-18;33!CL:0002057;1.38e-18;33!CL:0000094;1.86e-17;8!CL:0000576;1.31e-14;48!CL:0000766;1.71e-13;69!CL:0000473;1.75e-12;39!CL:0000234;1.75e-12;39!CL:0000081;3.00e-12;11!CL:0002393;3.38e-10;6!CL:0002397;3.38e-10;6!CL:0002087;1.02e-08;104!CL:0000775;3.48e-08;3!CL:0000623;4.29e-08;3!CL:0000226;6.96e-08;3!CL:0000842;6.96e-08;3!CL:0000738;7.85e-08;136!CL:0000767;6.92e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;1.38e-18;33!CL:0002057;1.38e-18;33!CL:0000094;1.86e-17;8!CL:0000576;1.31e-14;48!CL:0000766;1.71e-13;69!CL:0000473;1.75e-12;39!CL:0000234;1.75e-12;39!CL:0000081;3.00e-12;11!CL:0002393;3.38e-10;6!CL:0002397;3.38e-10;6!CL:0002087;1.02e-08;104!CL:0000775;3.48e-08;3!CL:0000623;4.29e-08;3!CL:0000226;6.96e-08;3!CL:0000842;6.96e-08;3!CL:0000738;7.85e-08;136!CL:0000767;6.92e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.36e-34,136;CL:0000766,4.47e-29,72;CL:0000860,2.33e-25,42;CL:0002057,2.33e-25,42;CL:0000037,3.83e-25,168;CL:0000988,4.12e-23,177;CL:0002032,8.23e-22,161;CL:0000837,8.23e-22,161;CL:0002031,9.82e-22,120;CL:0000473,2.75e-21,48;CL:0000234,2.75e-21,48;CL:0002087,1.08e-20,115;CL:0000557,2.65e-20,67;CL:0000763,1.77e-18,108;CL:0000049,1.77e-18,108;CL:0002009,6.95e-18,61;CL:0000839,1.32e-17,66;CL:0000094,1.35e-17,8;CL:0002194,1.25e-15,59;CL:0000576,1.25e-15,59;CL:0000040,1.25e-15,59;CL:0000559,1.25e-15,59;CL:0000081,2.39e-12,11;CL:0000134,9.40e-12,354;CL:0002320,3.31e-11,361;CL:0000219,2.67e-09,386;CL:0000775,2.64e-08,3;CL:0000623,3.67e-08,3;CL:0000825,3.67e-08,3;CL:0000226,6.86e-08,3;CL:0000842,6.86e-08,3;CL:0000034,1.00e-07,441;CL:0000048,1.58e-07,427;CL:0000723,3.31e-07,433;CL:0000767,7.66e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-19;42 | |ontology_enrichment_development_v019=CL:0002057;3.70e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-14!102;UBERON:0003061!1.65e-14!102;UBERON:0002193!1.10e-12!112;UBERON:0002371!3.57e-10!80;UBERON:0002405!1.01e-09!115;UBERON:0001474!1.02e-08!86;UBERON:0004765!3.95e-07!101;UBERON:0001434!3.95e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!1.65e-14!102;UBERON:0003061!1.65e-14!102;UBERON:0002193!1.10e-12!112;UBERON:0002371!3.57e-10!80;UBERON:0002405!1.01e-09!115;UBERON:0001474!1.02e-08!86;UBERON:0004765!3.95e-07!101;UBERON:0001434!3.95e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.06e-18,98;UBERON:0003061,1.06e-18,98;UBERON:0002193,3.29e-17,108;UBERON:0002371,5.99e-17,76;UBERON:0001474,3.95e-15,82;UBERON:0002405,1.76e-13,93;UBERON:0001434,3.08e-13,100;UBERON:0004765,4.29e-13,90;UBERON:0002384,4.65e-11,371;UBERON:0003081,3.20e-07,203 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.534893840235659,0.57470412614962,0.157421562627358,1.96682138424452,1.15148819429164,2.01260960310899,0,0,0,0.154934401160603,0.284338464974843,0.587200878669695,6.64794490238253,24.6669670388274,14.7567392086779,0,0,0,1.16318591023652,0,0,1.62700325833979,0.822335776043652,1.23882548358041,1.43846196161075,1.0246428261164,0.945928919554341,0.344745680736619,1.29096936716765,0,1.12945403725563,1.91034305040492,0.898893937780338,1.53041946185451,0.962787081228281,0.639337125799041,0.659702600373432,1.19678194572979,0.852449501065388,3.77272010217159,0.56738522469114,1.24564449799115,0.75374599577023,3.65038042894141,1.73751075764093,3.02699751316684,1.47311054395026,1.26584954976354,1.90129757680748,3.4016687994407,0.628975936525128,2.02191536063691,2.85336096398862,4.018139667427,0.285012743741249,0.99458338599545,0.365328307529268,0,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0,2.84606484554724,1.76171156811282,1.14681968437569,1.32171328579026,1.68152568894461,0,2.16380747125216,3.14408610199332,4.11202997999018,0.167186495390678,0.32592226663359,1.4203434172042,0,0.334231370655521,0.294605907474837,0.664601683750863,0.812411591295047,1.92136979588513,1.30059347559878,0.493313713811028,0.276350017785848,0,0.444859689486181,1.07016331235885,2.09071047609954,0.226618685395132,0.383220493601921,0.34362744548263,1.26509846009751,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,2.62088766192152,5.34880391567015,2.17236605824198,2.43806866313962,0,0,1.0843174571537,0,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,1.49091585508596,0,0.529636723252875,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.717558542755448,0,0,1.20036438433761,0,1.8034837803194,0,0.506328996723799,0,1.7670364197088,0.0920498986422993,0.323292113637624,3.19508633264953,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,2.78620756819187,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,2.95394953340702,1.32438929824395,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0.088048434013226,2.69526550203004,2.16179930125442,2.14612136824846,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,1.57275793023962,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.336255431980582,2.75843064282698,4.52817907204986,5.51875056002918,0.508189248444927,0,0,0.167516265334349,0,7.49007023947182,5.9832291840805,2.90090859405225,0.12269149171914,0,0.542530047399471,0.831883446123229,2.49800584316026,0.946214490203608,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,2.89475236572042,7.54999702865159,2.13455115606889,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,3.79993743535795,3.95153871551882,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,0.569647187174163,0.476463550915578,0,0.648473311192717,4.32025149790492,2.37937552888281,0,0,0,0.185803175125719,0.577076851905779,0.213425530045242,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0.307160702099232,0,0,0.333926115068718,0.16480387422676,0.844501632511974,7.96991953004279,1.93398740871803,0.755798243562828,0.102268682502155,0.738508832766417,0.311039587661807,0.179736702294654,0,0,0.394573622547734,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,1.25481369850743,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0.158936578980379,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0.889563386041866,0,0.417687798021821,0.269604531922708,1.60515529459758,0,0.182454789215666,0.586993856796269,0.242780379534093,0,0,0,5.7499787461924,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0,0,0,0.0633107959558787,0.977756913674015,0,1.280717968436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| ||
|short_description=p@chr19:39900896..39900918,+ | |short_description=p@chr19:39900896..39900918,+ | ||
}} | }} |
Latest revision as of 07:38, 26 July 2015
Short description: | p@chr19:39900896..39900918, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39900896..39900918, + |
Coexpression cluster: | C3787_CD14_Eosinophils_Neutrophils_Peripheral_aorta_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.06e-18 | 98 |
blood island | 1.06e-18 | 98 |
hemolymphoid system | 3.29e-17 | 108 |
bone marrow | 5.99e-17 | 76 |
bone element | 3.95e-15 | 82 |
immune system | 1.76e-13 | 93 |
skeletal system | 3.08e-13 | 100 |
skeletal element | 4.29e-13 | 90 |
connective tissue | 4.65e-11 | 371 |
lateral plate mesoderm | 3.20e-07 | 203 |