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FFCP PHASE1:Hg19::chr19:51625943..51625962,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr19:51625943..51625962,+
|coexpression_cluster_id=C0
|coexpression_cluster_id=C0
|description=CAGE_peak_at_chr19:51625943..51625962,+
|description=CAGE_peak_at_chr19:51625943..51625962,+
|id=chr19:51625943..51625962,+
|id=chr19:51625943..51625962,+
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|ontology_enrichment_celltype=CL:0002194!3.31e-94!63;CL:0000576!3.31e-94!63;CL:0000040!3.31e-94!63;CL:0000559!3.31e-94!63;CL:0000766!1.29e-92!76;CL:0002009!6.34e-91!65;CL:0000839!2.38e-90!70;CL:0000557!6.79e-89!71;CL:0002057!4.33e-86!42;CL:0000860!1.40e-79!45;CL:0000763!1.24e-65!112;CL:0000049!1.24e-65!112;CL:0000738!1.67e-55!140;CL:0002087!4.56e-54!119;CL:0002031!4.28e-49!124;CL:0000037!8.27e-46!172;CL:0000566!8.27e-46!172;CL:0002032!4.05e-43!165;CL:0000837!4.05e-43!165;CL:0000988!1.97e-42!182;CL:0000134!7.69e-18!358;CL:0002320!3.47e-17!365;CL:0000219!1.26e-15!390;CL:0000048!7.56e-13!430;CL:0000723!1.91e-12!436;CL:0000034!6.29e-12!444;CL:0000235!9.64e-09!10;CL:0002619!3.20e-08!3;CL:0000767!5.01e-08!3;CL:0000842!9.27e-08!3;CL:0002393!9.39e-07!9;CL:0002397!9.39e-07!9
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|ontology_enrichment_celltype_v019_2=CL:0000473,8.93e-146,48;CL:0000234,8.93e-146,48;CL:0000860,2.11e-126,42;CL:0002057,2.11e-126,42;CL:0002194,2.89e-115,59;CL:0000576,2.89e-115,59;CL:0000040,2.89e-115,59;CL:0000559,2.89e-115,59;CL:0002009,2.51e-111,61;CL:0000839,1.65e-102,66;CL:0000557,6.67e-101,67;CL:0000766,1.31e-98,72;CL:0000763,9.31e-64,108;CL:0000049,9.31e-64,108;CL:0002087,2.73e-56,115;CL:0002031,1.13e-53,120;CL:0000738,2.69e-49,136;CL:0002032,1.34e-40,161;CL:0000837,1.34e-40,161;CL:0000037,1.27e-38,168;CL:0000988,2.60e-36,177;CL:0000235,1.16e-19,6;CL:0000134,1.39e-14,354;CL:0002320,3.70e-14,361;CL:0000219,1.17e-12,386;CL:0000048,8.03e-11,427;CL:0000723,1.44e-10,433;CL:0000034,3.06e-10,441
|ontology_enrichment_development_v019=CL:0002057;9.18e-92;42!CL:0000049;5.38e-19;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0002371!2.06e-77!80;UBERON:0001474!4.43e-71!86;UBERON:0002390!1.36e-70!102;UBERON:0003061!1.36e-70!102;UBERON:0002193!5.33e-63!112;UBERON:0004765!1.64e-58!101;UBERON:0001434!1.64e-58!101;UBERON:0002405!1.01e-49!115;UBERON:0002204!2.00e-31!167;UBERON:0003081!2.57e-29!216;UBERON:0002384!3.91e-17!375;UBERON:0000926!2.39e-10!448;UBERON:0004120!2.39e-10!448;UBERON:0006603!2.39e-10!448
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-88,76;UBERON:0001474,1.99e-81,82;UBERON:0004765,1.16e-73,90;UBERON:0002405,4.33e-71,93;UBERON:0002390,3.77e-67,98;UBERON:0003061,3.77e-67,98;UBERON:0001434,1.11e-65,100;UBERON:0002193,2.37e-60,108;UBERON:0002204,1.09e-36,167;UBERON:0003081,8.28e-31,203;UBERON:0000926,2.57e-17,315;UBERON:0004120,2.57e-17,315;UBERON:0006603,2.57e-17,315;UBERON:0002384,1.41e-13,371
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|short_description=p@chr19:51625943..51625962,+
|short_description=p@chr19:51625943..51625962,+
}}
}}

Latest revision as of 16:38, 27 July 2015

Short description:p@chr19:51625943..51625962, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr19:51625943..51625962, +
Coexpression cluster:C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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