FFCP PHASE1:Hg19::chr1:10683081..10683110,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:10683081..10683110,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr1:10683081..10683110,+ | |description=CAGE_peak_at_chr1:10683081..10683110,+ | ||
|id=chr1:10683081..10683110,+ | |id=chr1:10683081..10683110,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.44e-16;1!UBERON:0005754;1.07e-15;1!UBERON:0009143;2.21e-15;1!UBERON:0001045;2.21e-15;1!UBERON:0007297;1.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001046!1.81e-09!19;UBERON:0000162!4.51e-07!14;UBERON:0001353!4.51e-07!14;UBERON:0000163!4.51e-07!14;UBERON:0006866!4.51e-07!14;UBERON:0000164!4.51e-07!14;UBERON:0000931!4.51e-07!14;UBERON:0007023!5.44e-07!115;UBERON:0006947!6.42e-07!3;UBERON:0004054!6.42e-07!3;UBERON:0005156!8.95e-07!59;UBERON:0000990!8.95e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.15e-20;3!UBERON:0004054;7.15e-20;3!UBERON:0005795;1.07e-15;1!UBERON:0000998;1.07e-15;1!UBERON:0006868;1.07e-15;1!UBERON:0001154;2.21e-15;1!UBERON:0001000;2.21e-15;1!UBERON:0000996;2.21e-15;1!UBERON:0001153;2.21e-15;1!UBERON:0009854;2.21e-15;1!UBERON:0005352;2.21e-15;1!UBERON:0005904;3.67e-15;4!UBERON:0004907;3.35e-12;5!UBERON:0004175;4.74e-11;21!UBERON:0001255;1.39e-08;2!UBERON:0001556;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.37e-20,3;UBERON:0004054,5.37e-20,3;UBERON:0001046,1.06e-18,19;UBERON:0000998,9.99e-16,1;UBERON:0006868,9.99e-16,1;UBERON:0000996,1.34e-15,1;UBERON:0001000,1.54e-15,1;UBERON:0005352,1.54e-15,1;UBERON:0005904,2.96e-15,4;UBERON:0001154,3.17e-15,1;UBERON:0001153,3.17e-15,1;UBERON:0001045,3.17e-15,1;UBERON:0003064,8.82e-13,28;UBERON:0004907,3.75e-12,5;UBERON:0000162,7.26e-10,14;UBERON:0001353,7.26e-10,14;UBERON:0000163,7.26e-10,14;UBERON:0006866,7.26e-10,14;UBERON:0000164,7.26e-10,14;UBERON:0000931,7.26e-10,14;UBERON:0004175,2.26e-09,25;UBERON:0004122,3.03e-09,15;UBERON:0007023,3.29e-09,114;UBERON:0001255,1.39e-08,2;UBERON:0001556,1.39e-08,2;UBERON:0001008,1.94e-07,48;UBERON:0000058,2.59e-07,19;UBERON:0000080,3.04e-07,9;UBERON:0002120,3.04e-07,9;UBERON:0004875,3.04e-07,9;UBERON:0005721,3.04e-07,9;UBERON:0005754,3.04e-07,9;UBERON:0007297,3.04e-07,9 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,1.10513566212459,0.251932747854276,0,0,0,0,0,0,8.38468947913936,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,1.15425387755696,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,1.97292201424695,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0,0,1.06687918137261,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,4.63109247818033,0,0,1.82631744101899,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,2.11693525095465,0,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,22.0633489578515,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,1.9307228228694,0,9.38563769613817,0,2.03448089157869,1.99727032255654,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,1.10513566212459,0.251932747854276,0,0,0,0,0,0,8.38468947913936,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,1.15425387755696,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,1.97292201424695,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0,0,1.06687918137261,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,4.63109247818033,0,0,1.82631744101899,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,2.11693525095465,0,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,22.0633489578515,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,1.9307228228694,0,9.38563769613817,0,2.03448089157869,1.99727032255654,0,0 | ||
|short_description=p@chr1:10683081..10683110,+ | |short_description=p@chr1:10683081..10683110,+ | ||
}} | }} |
Latest revision as of 19:08, 27 July 2015
Short description: | p@chr1:10683081..10683110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:10683081..10683110, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.37e-20 | 3 |
internal male genitalia | 5.37e-20 | 3 |
hindgut | 1.06e-18 | 19 |
seminal vesicle | 9.99e-16 | 1 |
seminal fluid secreting gland | 9.99e-16 | 1 |
vagina | 1.34e-15 | 1 |
vas deferens | 1.54e-15 | 1 |
spermatic cord | 1.54e-15 | 1 |
duct of male reproductive system | 2.96e-15 | 4 |
vermiform appendix | 3.17e-15 | 1 |
caecum | 3.17e-15 | 1 |
midgut | 3.17e-15 | 1 |
intermediate mesoderm | 8.82e-13 | 28 |
lower digestive tract | 3.75e-12 | 5 |
cloaca | 7.26e-10 | 14 |
anal region | 7.26e-10 | 14 |
embryonic cloaca | 7.26e-10 | 14 |
terminal part of digestive tract | 7.26e-10 | 14 |
primitive urogenital sinus | 7.26e-10 | 14 |
proctodeum | 7.26e-10 | 14 |
internal genitalia | 2.26e-09 | 25 |
genitourinary system | 3.03e-09 | 15 |
adult organism | 3.29e-09 | 114 |
urinary bladder | 1.39e-08 | 2 |
lower urinary tract | 1.39e-08 | 2 |
renal system | 1.94e-07 | 48 |
duct | 2.59e-07 | 19 |
mesonephros | 3.04e-07 | 9 |
pronephros | 3.04e-07 | 9 |
nephrogenic cord | 3.04e-07 | 9 |
pronephric mesoderm | 3.04e-07 | 9 |
rostral part of nephrogenic cord | 3.04e-07 | 9 |
presumptive pronephric mesoderm | 3.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.15e-08 | 2 |