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FFCP PHASE1:Hg19::chr1:108593061..108593077,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:108593061..108593077,+
|coexpression_cluster_id=C65
|coexpression_cluster_id=C65
|description=CAGE_peak_at_chr1:108593061..108593077,+
|description=CAGE_peak_at_chr1:108593061..108593077,+
|id=chr1:108593061..108593077,+
|id=chr1:108593061..108593077,+
|ontology_enrichment_celltype=CL:0000860;1.61e-114;33!CL:0002057;1.61e-114;33!CL:0000473;6.52e-108;39!CL:0000234;6.52e-108;39!CL:0000576;3.89e-77;48!CL:0000766;2.98e-45;69!CL:0000763;4.03e-25;100!CL:0002087;6.49e-19;104!CL:0000235;2.45e-17;6!CL:0000738;6.76e-15;136!CL:0002619;4.54e-13;3!CL:0000988;1.28e-09;177
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|ontology_enrichment_development=CL:0002057;1.50e-83;42!CL:0000049;1.79e-21;108
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-114;33!CL:0002057;1.61e-114;33!CL:0000473;6.52e-108;39!CL:0000234;6.52e-108;39!CL:0000576;3.89e-77;48!CL:0000766;2.98e-45;69!CL:0000763;4.03e-25;100!CL:0002087;6.49e-19;104!CL:0000235;2.45e-17;6!CL:0000738;6.76e-15;136!CL:0002619;4.54e-13;3!CL:0000988;1.28e-09;177
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|ontology_enrichment_development_v019=CL:0002057;1.50e-83;42!CL:0000049;1.79e-21;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!4.95e-80!102;UBERON:0003061!4.95e-80!102;UBERON:0002371!2.85e-77!80;UBERON:0002193!7.27e-74!112;UBERON:0001474!7.70e-71!86;UBERON:0004765!2.49e-60!101;UBERON:0001434!2.49e-60!101;UBERON:0002405!3.37e-55!115;UBERON:0003081!4.98e-35!216;UBERON:0002204!2.12e-30!167;UBERON:0002384!2.83e-14!375;UBERON:0000926!3.70e-10!448;UBERON:0004120!3.70e-10!448;UBERON:0006603!3.70e-10!448
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.95e-98,76;UBERON:0001474,1.01e-90,82;UBERON:0004765,5.10e-82,90;UBERON:0002405,3.89e-79,93;UBERON:0002390,1.90e-78,98;UBERON:0003061,1.90e-78,98;UBERON:0001434,4.47e-73,100;UBERON:0002193,1.75e-70,108;UBERON:0002204,1.39e-40,167;UBERON:0003081,1.02e-33,203;UBERON:0000926,1.06e-18,315;UBERON:0004120,1.06e-18,315;UBERON:0006603,1.06e-18,315;UBERON:0002384,1.40e-15,371;UBERON:0000923,3.46e-07,560;UBERON:0010316,3.46e-07,560;UBERON:0005291,3.46e-07,560;UBERON:0006598,3.46e-07,560;UBERON:0010317,3.46e-07,560;UBERON:0002532,3.46e-07,560;UBERON:0002050,4.51e-07,564
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|short_description=p@chr1:108593061..108593077,+
|short_description=p@chr1:108593061..108593077,+
}}
}}

Latest revision as of 19:12, 27 July 2015

Short description:p@chr1:108593061..108593077, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:108593061..108593077, +
Coexpression cluster:C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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