FFCP PHASE1:Hg19::chr1:109792214..109792219,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1952 | |EntrezGene=entrezgene:1952 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3231 | |HGNC=HGNC:3231 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9HCU4 | |UniProt=uniprot:Q9HCU4 | ||
|association_with_transcript=-421bp_to_ENST00000271332,NM_001408,uc001dxa.3_5end | |association_with_transcript=-421bp_to_ENST00000271332,NM_001408,uc001dxa.3_5end | ||
|cluster_id=chr1:109792214..109792219,+ | |||
|coexpression_cluster_id=C3844 | |coexpression_cluster_id=C3844 | ||
|description=CAGE_peak_5_at_CELSR2_5end | |description=CAGE_peak_5_at_CELSR2_5end | ||
Revision as of 19:19, 27 July 2015
| Short description: | p5@CELSR2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CELSR2_5end |
| Coexpression cluster: | C3844_MCF7_cervical_occipital_temporal_postcentral_brain_parietal |
| Association with transcript: | -421bp_to_ENST00000271332, NM_001408, uc001dxa.3_5end |
| EntrezGene: | 1952 |
| HGNC: | 3231 |
| UniProt: | Q9HCU4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@CELSR2 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 2.18e-10 | 8 |
| neuron | 2.82e-08 | 6 |
| neuroblast | 2.82e-08 | 6 |
| electrically signaling cell | 2.82e-08 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of forebrain | 1.34e-47 | 41 |
| forebrain | 1.34e-47 | 41 |
| anterior neural tube | 1.34e-47 | 41 |
| future forebrain | 1.34e-47 | 41 |
| telencephalon | 3.05e-47 | 34 |
| regional part of cerebral cortex | 3.03e-46 | 22 |
| central nervous system | 8.65e-45 | 81 |
| neocortex | 5.28e-44 | 20 |
| cerebral cortex | 1.58e-40 | 25 |
| pallium | 1.58e-40 | 25 |
Showing 1 to 10 of 41 entries
| Ontology term | p-value | n |
|---|---|---|
| thoracic cancer | 1.37e-12 | 4 |
| breast cancer | 1.37e-12 | 4 |
| skin squamous cell carcinoma | 8.81e-07 | 1 |
| keratoacanthoma | 8.81e-07 | 1 |
Showing 1 to 4 of 4 entries
