FFCP PHASE1:Hg19::chr1:150484248..150484262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:150484248..150484262,+ | |||
|coexpression_cluster_id=C766 | |||
|description=CAGE_peak_at_chr1:150484248..150484262,+ | |description=CAGE_peak_at_chr1:150484248..150484262,+ | ||
|id=chr1:150484248..150484262,+ | |id=chr1:150484248..150484262,+ | ||
|ontology_enrichment_celltype=CL:0000057!7.65e-16!75;CL:0000055!1.32e-14!180;CL:0002620!1.48e-10!23;CL:0002371!1.40e-07!591 | |ontology_enrichment_celltype=CL:0000057!7.65e-16!75;CL:0000055!1.32e-14!180;CL:0002620!1.48e-10!23;CL:0002371!1.40e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.62e-12;23!CL:0000135;4.31e-09;3!CL:0000388;4.31e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.08e-15,76;CL:0002620,1.77e-12,23;CL:0000135,4.84e-09,3;CL:0000388,4.84e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.77e-12;5!DOID:450;2.77e-12;5!DOID:66;2.77e-12;5!DOID:423;2.77e-12;5!DOID:0080000;2.77e-12;5!DOID:11722;2.77e-12;5!DOID:0060084;3.08e-08;3!DOID:127;3.08e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.21e-12,5;DOID:450,2.21e-12,5;DOID:66,2.21e-12,5;DOID:423,2.21e-12,5;DOID:0080000,2.21e-12,5;DOID:11722,2.21e-12,5;DOID:0060084,1.89e-08,3;DOID:127,1.89e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.54e-15!95;UBERON:0002199!5.86e-11!45;UBERON:0002416!5.86e-11!45;UBERON:0002097!4.00e-10!40 | |ontology_enrichment_uberon=UBERON:0003102!4.54e-15!95;UBERON:0002199!5.86e-11!45;UBERON:0002416!5.86e-11!45;UBERON:0002097!4.00e-10!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.82e-11;41!UBERON:0002199;1.69e-10;46!UBERON:0002416;1.69e-10;46!UBERON:0003102;1.63e-09;50!UBERON:0007846;4.31e-09;3!UBERON:0000043;4.31e-09;3!UBERON:0007845;4.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.92e-16,46;UBERON:0002416,2.92e-16,46;UBERON:0003102,7.60e-14,99;UBERON:0002097,3.93e-13,41;UBERON:0007846,4.84e-09,3;UBERON:0000043,4.84e-09,3;UBERON:0007845,4.84e-09,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0.893922188854576,0.872338524100369,0,1.26343974685366,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.994192127183747,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,1.11235332835329,0,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,2.58152958673932,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0,0,0,1.04614076386261,0.704606991862589,0.161872944368132,0.140450806702248,0,0.982674538494144,0.723280468230358,1.18800285728205,2.22540236350701,0,2.15585442544872,0.168336113954066,0.375355559615893,0,0.438977620880838,1.5324389789951,0.901428353439581,0.113432183160021,3.7671823494661,1.2813443329114,1.27159140695737,2.70081986475962,1.75189299705346,2.83404594050192,0.744467425326359,1.85653965465393,1.36411807225678,1.51460264546469,0.276149695926898,0.80823028409406,2.13005755509969,1.0075209822764,0.67824236924195,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0.10366105501537,0,0,3.12899064659632,3.85944562915731,0,0.928735856063958,4.33127689001751,0.236613600079688,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0,0.594524649154913,0,1.00789276919316,0,0,0.290633938513962,0,0,0.44024217006613,0,0.144119953416961,0,0.571481048629521,0,1.17217447210047,1.71072446022705,2.15937734676979,1.8020583470635,0.857479297891735,0.224262168690721,0,0.36669142910475,0.129271715757778,0,0.845302752556,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0,0,1.2162378064119,0.502257091432126,4.21667878966063,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.03985430765404,7.31558854068363,1.57702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.868836144680828,0.587403472388222,0.686286847621712,0,0,0,0,1.66435439510497,0.30239029332968,0,0.460385919864187,0.841980283299221,0.640695746278505,0,0.482561763430822,4.45254199334973,2.00472601943452,2.84098760501003,0.164254312027618,3.11552657510173,1.85936605535935,0,0.200506470303285,0.460404944679482,0.459257792658427,1.63882051206045,3.8026080338233,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,11.6480568327337,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0,0,0,0.953150969619124,0,0,0.318203247925937,0,0.179872457583315,1.64722217841633,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0.136499911407986,0.989838023675989,1.13008116620243,0,0.66343897524122,0,2.31510213706675,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,2.11107635297664,3.29294892959902,0,0.349934720244983,0,1.34060455107157,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0.390776190804081,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0.179515288819544,0,0.31900115973192,0.274792780205587,0,0,0.31396051279005,0,0,0.19606253431774,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.554698692052555,0,0.293977192243133,0,4.36816670605075,0,0.290268993867255,0.146178634172371,0.0821154570532092,1.35784623083787,0,0.225980740780532,0,0.19871461170299,0,0.195551382734803,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,0,0,1.39641200636127,0,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07572403599707,0,0.714695326373367,0,0,2.17199840701485,1.72844298240254,2.61269888087527,0,0,3.9189245010647,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.1220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| ||
|short_description=p@chr1:150484248..150484262,+ | |short_description=p@chr1:150484248..150484262,+ | ||
}} | }} |
Latest revision as of 21:09, 27 July 2015
Short description: | p@chr1:150484248..150484262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:150484248..150484262, + |
Coexpression cluster: | C766_Smooth_esophagus_throat_epididymis_Fibroblast_tonsil_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.08e-15 | 76 |
skin fibroblast | 1.77e-12 | 23 |
fibrocyte | 4.84e-09 | 3 |
tendon cell | 4.84e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 2.92e-16 | 46 |
integumental system | 2.92e-16 | 46 |
surface structure | 7.60e-14 | 99 |
skin of body | 3.93e-13 | 41 |
dense regular connective tissue | 4.84e-09 | 3 |
tendon | 4.84e-09 | 3 |
regular connective tissue | 4.84e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.21e-12 | 5 |
myotonic disease | 2.21e-12 | 5 |
muscle tissue disease | 2.21e-12 | 5 |
myopathy | 2.21e-12 | 5 |
muscular disease | 2.21e-12 | 5 |
myotonic dystrophy | 2.21e-12 | 5 |
cell type benign neoplasm | 1.89e-08 | 3 |
leiomyoma | 1.89e-08 | 3 |