FFCP PHASE1:Hg19::chr1:153533922..153533941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153533922..153533941,- | |||
|coexpression_cluster_id=C688 | |||
|description=CAGE_peak_at_chr1:153533922..153533941,- | |description=CAGE_peak_at_chr1:153533922..153533941,- | ||
|id=chr1:153533922..153533941,- | |id=chr1:153533922..153533941,- | ||
|ontology_enrichment_celltype=CL:0002076!2.80e-36!43;CL:0000223!1.06e-26!59;CL:0002368!6.19e-26!13;CL:0000066!7.35e-23!254;CL:0002202!1.90e-20!9;CL:0002632!1.90e-20!9;CL:0002159!2.81e-17!13;CL:0002251!2.13e-14!21;CL:0000244!9.09e-13!4;CL:0000731!9.09e-13!4;CL:0000076!1.86e-10!62;CL:0002328!2.90e-10!3;CL:0002621!3.27e-10!3;CL:0000068!7.76e-10!3;CL:0000069!7.76e-10!3;CL:0000307!7.76e-10!3;CL:0000377!7.76e-10!3;CL:0002166!2.09e-09!3;CL:0000220!1.14e-08!246;CL:0002077!1.42e-08!33;CL:0002321!1.59e-08!248;CL:0000240!2.60e-08!6;CL:0000311!2.60e-08!6;CL:0000079!2.60e-08!6;CL:0000237!2.60e-08!6;CL:0000036!2.60e-08!6;CL:0000357!2.60e-08!6;CL:0000114!2.60e-08!6;CL:0000575!2.36e-07!2;CL:0002327!2.84e-07!4 | |ontology_enrichment_celltype=CL:0002076!2.80e-36!43;CL:0000223!1.06e-26!59;CL:0002368!6.19e-26!13;CL:0000066!7.35e-23!254;CL:0002202!1.90e-20!9;CL:0002632!1.90e-20!9;CL:0002159!2.81e-17!13;CL:0002251!2.13e-14!21;CL:0000244!9.09e-13!4;CL:0000731!9.09e-13!4;CL:0000076!1.86e-10!62;CL:0002328!2.90e-10!3;CL:0002621!3.27e-10!3;CL:0000068!7.76e-10!3;CL:0000069!7.76e-10!3;CL:0000307!7.76e-10!3;CL:0000377!7.76e-10!3;CL:0002166!2.09e-09!3;CL:0000220!1.14e-08!246;CL:0002077!1.42e-08!33;CL:0002321!1.59e-08!248;CL:0000240!2.60e-08!6;CL:0000311!2.60e-08!6;CL:0000079!2.60e-08!6;CL:0000237!2.60e-08!6;CL:0000036!2.60e-08!6;CL:0000357!2.60e-08!6;CL:0000114!2.60e-08!6;CL:0000575!2.36e-07!2;CL:0002327!2.84e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;8.09e-24;13!CL:0002076;1.02e-23;42!CL:0002621;1.35e-20;3!CL:0002328;2.13e-20;3!CL:0002202;3.61e-18;9!CL:0002632;3.61e-18;9!CL:0002159;2.19e-16;14!CL:0000244;1.87e-15;4!CL:0000731;1.87e-15;4!CL:0000575;3.43e-14;2!CL:0000622;6.92e-12;5!CL:0002251;3.15e-11;20!CL:0000240;1.03e-10;6!CL:0000311;1.03e-10;6!CL:0000079;1.03e-10;6!CL:0000237;1.03e-10;6!CL:0000154;5.42e-10;6!CL:0000307;9.30e-10;3!CL:0002623;2.51e-09;3!CL:0002336;6.10e-08;1!CL:0002261;6.10e-08;1!CL:0002170;6.10e-08;1!CL:0002077;6.69e-08;34!CL:0000362;3.50e-07;9!CL:0000150;8.12e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.33e-27,42;CL:0002368,6.94e-24,13;CL:0002328,1.44e-20,3;CL:0002621,1.88e-20,3;CL:0000223,3.17e-19,58;CL:0002202,2.92e-18,9;CL:0002632,2.92e-18,9;CL:0000066,1.26e-16,253;CL:0002159,1.94e-16,14;CL:0000244,1.43e-15,4;CL:0000731,1.43e-15,4;CL:0000575,3.21e-14,2;CL:0000622,4.47e-12,5;CL:0002251,3.33e-11,20;CL:0000240,1.11e-10,6;CL:0000311,1.11e-10,6;CL:0000079,1.11e-10,6;CL:0000237,1.11e-10,6;CL:0000036,1.11e-10,6;CL:0000357,1.11e-10,6;CL:0000114,1.11e-10,6;CL:0000154,3.78e-10,6;CL:0000068,9.30e-10,3;CL:0000069,9.30e-10,3;CL:0000307,9.30e-10,3;CL:0000377,9.30e-10,3;CL:0002623,2.03e-09,3;CL:0000076,1.29e-08,63;CL:0002077,1.41e-08,34;CL:0002321,4.06e-08,250;CL:0002336,7.45e-08,1;CL:0002261,7.45e-08,1;CL:0002170,7.45e-08,1;CL:0000362,3.02e-07,9;CL:0000150,6.42e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.03e-10;6!CL:0000114;1.03e-10;6!CL:0000377;9.30e-10;3!CL:0000223;1.62e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.20e-21!14 | |ontology_enrichment_disease=DOID:1749!1.20e-21!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.31e-07;1!DOID:3149;1.31e-07;1!DOID:1749;1.92e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.87e-07,14;DOID:3151,1.99e-07,1;DOID:3149,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007196!1.09e-15!14;UBERON:0001558!1.09e-15!14;UBERON:0001004!2.98e-15!72;UBERON:0000365!4.84e-15!5;UBERON:0004119!1.63e-14!169;UBERON:0000925!1.63e-14!169;UBERON:0006595!1.63e-14!169;UBERON:0000161!1.15e-12!35;UBERON:0005910!1.81e-12!6;UBERON:0000165!4.45e-12!28;UBERON:0000930!4.45e-12!28;UBERON:0000166!9.80e-12!21;UBERON:0004815!2.90e-10!3;UBERON:0002031!2.90e-10!3;UBERON:0001949!3.27e-10!3;UBERON:0003102!4.01e-10!95;UBERON:0000065!5.87e-10!53;UBERON:0005178!1.18e-09!34;UBERON:0002224!1.18e-09!34;UBERON:0001007!2.08e-09!155;UBERON:0001555!2.08e-09!155;UBERON:0007026!2.08e-09!155;UBERON:0005181!2.66e-09!35;UBERON:0003729!5.43e-09!5;UBERON:0005153!1.07e-08!37;UBERON:0001444!1.53e-08!48;UBERON:0005911!4.32e-08!82;UBERON:0005157!5.07e-08!51;UBERON:0002185!8.93e-08!4;UBERON:0000344!1.52e-07!12;UBERON:0000072!1.52e-07!46;UBERON:0001911!2.84e-07!4;UBERON:0005333!2.84e-07!4;UBERON:0008425!2.84e-07!4;UBERON:0005311!2.84e-07!4;UBERON:0001708!3.83e-07!4;UBERON:0001704!3.83e-07!4;UBERON:0004807!5.00e-07!28;UBERON:0003126!6.70e-07!7;UBERON:0001005!6.70e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.35e-20;3!UBERON:0004815;2.13e-20;3!UBERON:0002031;2.13e-20;3!UBERON:0000486;2.22e-19;12!UBERON:0000365;1.80e-12;5!UBERON:0002185;1.84e-12;5!UBERON:0005911;7.18e-12;36!UBERON:0007196;7.95e-11;15!UBERON:0001558;7.95e-11;15!UBERON:0005910;1.78e-10;6!UBERON:0004807;2.51e-10;22!UBERON:0003929;4.00e-09;7!UBERON:0000485;4.86e-09;7!UBERON:0000161;2.19e-08;19!UBERON:0000166;2.19e-08;19!UBERON:0003729;2.37e-08;13!UBERON:0003350;4.88e-08;8!UBERON:0001828;4.88e-08;8!UBERON:0000165;7.28e-08;28!UBERON:0000964;1.59e-07;4!UBERON:0010409;1.59e-07;4!UBERON:0010371;4.93e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.44e-20,3;UBERON:0002031,1.44e-20,3;UBERON:0001949,1.88e-20,3;UBERON:0000365,1.45e-12,5;UBERON:0002185,1.45e-12,5;UBERON:0007196,7.02e-11,15;UBERON:0001558,7.02e-11,15;UBERON:0005910,1.49e-10,6;UBERON:0001004,2.08e-10,74;UBERON:0003102,4.40e-10,99;UBERON:0004119,2.76e-08,160;UBERON:0000925,2.76e-08,160;UBERON:0006595,2.76e-08,160;UBERON:0003729,2.76e-08,13;UBERON:0004807,5.35e-08,28;UBERON:0003350,5.50e-08,8;UBERON:0001828,5.50e-08,8;UBERON:0000033,6.18e-08,56;UBERON:0000165,1.47e-07,29;UBERON:0000930,1.47e-07,29;UBERON:0000964,1.54e-07,4;UBERON:0010409,1.54e-07,4;UBERON:0004348,1.54e-07,4;UBERON:0005427,1.54e-07,4;UBERON:0001444,2.26e-07,49;UBERON:0000166,3.29e-07,22;UBERON:0000485,3.50e-07,9;UBERON:0000153,4.95e-07,62;UBERON:0007811,4.95e-07,62 | |||
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| ||
|short_description=p@chr1:153533922..153533941,- | |short_description=p@chr1:153533922..153533941,- | ||
}} | }} |
Latest revision as of 21:44, 27 July 2015
Short description: | p@chr1:153533922..153533941, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153533922..153533941, - |
Coexpression cluster: | C688_Bronchial_Tracheal_Corneal_Prostate_Urothelial_Mallassezderived_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.44e-20 | 3 |
epithelium of bronchus | 1.44e-20 | 3 |
gingival epithelium | 1.88e-20 | 3 |
urothelium | 1.45e-12 | 5 |
bronchus | 1.45e-12 | 5 |
tracheobronchial tree | 7.02e-11 | 15 |
lower respiratory tract | 7.02e-11 | 15 |
transitional epithelium | 1.49e-10 | 6 |
respiratory system | 2.08e-10 | 74 |
surface structure | 4.40e-10 | 99 |
endoderm-derived structure | 2.76e-08 | 160 |
endoderm | 2.76e-08 | 160 |
presumptive endoderm | 2.76e-08 | 160 |
mouth mucosa | 2.76e-08 | 13 |
respiratory system epithelium | 5.35e-08 | 28 |
epithelium of mucosa | 5.50e-08 | 8 |
gingiva | 5.50e-08 | 8 |
head | 6.18e-08 | 56 |
mouth | 1.47e-07 | 29 |
stomodeum | 1.47e-07 | 29 |
cornea | 1.54e-07 | 4 |
eye surface | 1.54e-07 | 4 |
optic eminence | 1.54e-07 | 4 |
corneal primordium | 1.54e-07 | 4 |
subdivision of head | 2.26e-07 | 49 |
oral opening | 3.29e-07 | 22 |
simple columnar epithelium | 3.50e-07 | 9 |
anterior region of body | 4.95e-07 | 62 |
craniocervical region | 4.95e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.87e-07 | 14 |
skin squamous cell carcinoma | 1.99e-07 | 1 |
keratoacanthoma | 1.99e-07 | 1 |