FFCP PHASE1:Hg19::chr1:240256439..240256449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240256439..240256449,- | |||
|description=CAGE_peak_at_chr1:240256439..240256449,- | |description=CAGE_peak_at_chr1:240256439..240256449,- | ||
|id=chr1:240256439..240256449,- | |id=chr1:240256439..240256449,- | ||
|ontology_enrichment_celltype=CL:0000057!1.27e-30!75;CL:0002620!7.86e-26!23;CL:0000055!1.74e-25!180;CL:0002334!1.60e-10!12 | |ontology_enrichment_celltype=CL:0000057!1.27e-30!75;CL:0002620!7.86e-26!23;CL:0000055!1.74e-25!180;CL:0002334!1.60e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.39e-36;23!CL:0000057;1.73e-10;73!CL:0002559;3.40e-09;5!CL:0000346;2.29e-07;3!CL:1000428;2.29e-07;3!CL:0002582;8.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.47e-36,23;CL:0000057,1.55e-23,76;CL:0002559,3.60e-09,5;CL:0000346,2.48e-07,3;CL:1000428,2.48e-07,3;CL:0002582,9.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.64e-09!5;DOID:450!9.64e-09!5;DOID:66!9.64e-09!5;DOID:423!9.64e-09!5;DOID:0080000!9.64e-09!5;DOID:11722!9.64e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.72e-22;5!DOID:450;2.72e-22;5!DOID:66;2.72e-22;5!DOID:423;2.72e-22;5!DOID:0080000;2.72e-22;5!DOID:11722;2.72e-22;5!DOID:0060084;1.84e-14;3!DOID:127;1.84e-14;3!DOID:0060072;5.76e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.49e-22,5;DOID:450,2.49e-22,5;DOID:66,2.49e-22,5;DOID:423,2.49e-22,5;DOID:0080000,2.49e-22,5;DOID:11722,2.49e-22,5;DOID:0060084,1.65e-14,3;DOID:127,1.65e-14,3;DOID:0060072,5.31e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.57e-18!45;UBERON:0002416!1.57e-18!45;UBERON:0002097!1.81e-18!40;UBERON:0003102!5.36e-17!95;UBERON:0000475!6.57e-09!365;UBERON:0000914!1.27e-07!83;UBERON:0002329!1.27e-07!83;UBERON:0003077!1.27e-07!83;UBERON:0003059!1.27e-07!83;UBERON:0007282!1.27e-07!83;UBERON:0009618!1.27e-07!83;UBERON:0007285!1.27e-07!83;UBERON:0002067!3.92e-07!9;UBERON:0004016!3.92e-07!9;UBERON:0010083!3.92e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.36e-25;41!UBERON:0002199;9.07e-21;46!UBERON:0002416;9.07e-21;46!UBERON:0003102;8.50e-16;50!UBERON:0002073;3.40e-09;5!UBERON:0000412;2.29e-07;3!UBERON:0001992;2.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.70e-32,41;UBERON:0002199,1.81e-31,46;UBERON:0002416,1.81e-31,46;UBERON:0003102,4.15e-25,99;UBERON:0002073,3.60e-09,5;UBERON:0005086,3.60e-09,5;UBERON:0000412,2.48e-07,3;UBERON:0001992,2.48e-07,3 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,3.56400857184616,2.22540236350701,0.910161361938026,0.718618141816238,0,0,0,1.31693286264251,3.67785354958824,0.600952235626387,0,1.79389635688862,1.06778694409284,1.05965950579781,3.90118424909723,5.77094163735258,2.31876486041066,6.32797311527405,1.0126579934476,9.25651549031387,3.5340728394176,1.19664868234989,0.969876340912871,2.84007674013291,7.45565526884538,6.27374191548804,0,0,0,0,0,0.116193942869518,0,0,0,3.12899064659632,6.43240938192885,0,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.129271715757778,0,0,1.86156681609409,1.04007436911366,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,1.30303176000821,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,1.42743191037729,1.26161932027148,0.234282829985426,0.300946099727719,0,0,0,0.737476674166813,2.95404289191482,0.391602314925481,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,0.841980283299221,0.128139149255701,0,0.160853921143607,0,1.07946785661859,0.355123450626254,2.21743321237285,0.519254429183621,1.16210378459959,0,0,0,0.803701137152247,1.45672934405374,0.917870904715969,0,0,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,4.18360994367557,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,2.59349831675173,0.565621727814851,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,2.79935628895627,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,3.80099721227599,2.5926644736038,2.28611152076586,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,3.77735275701072,3.03074539889327,0,0,0,0.521988583930423,0.226705925512272,0,0,0,0,0.657852148736121,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,3.17408349321616,0.3062454773532,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,1.60342272946051,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0391253762538,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0.747243402759005,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0,3.56400857184616,2.22540236350701,0.910161361938026,0.718618141816238,0,0,0,1.31693286264251,3.67785354958824,0.600952235626387,0,1.79389635688862,1.06778694409284,1.05965950579781,3.90118424909723,5.77094163735258,2.31876486041066,6.32797311527405,1.0126579934476,9.25651549031387,3.5340728394176,1.19664868234989,0.969876340912871,2.84007674013291,7.45565526884538,6.27374191548804,0,0,0,0,0,0.116193942869518,0,0,0,3.12899064659632,6.43240938192885,0,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.129271715757778,0,0,1.86156681609409,1.04007436911366,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,1.30303176000821,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,1.42743191037729,1.26161932027148,0.234282829985426,0.300946099727719,0,0,0,0.737476674166813,2.95404289191482,0.391602314925481,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,0.841980283299221,0.128139149255701,0,0.160853921143607,0,1.07946785661859,0.355123450626254,2.21743321237285,0.519254429183621,1.16210378459959,0,0,0,0.803701137152247,1.45672934405374,0.917870904715969,0,0,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,4.18360994367557,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,2.59349831675173,0.565621727814851,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,2.79935628895627,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,3.80099721227599,2.5926644736038,2.28611152076586,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,3.77735275701072,3.03074539889327,0,0,0,0.521988583930423,0.226705925512272,0,0,0,0,0.657852148736121,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,3.17408349321616,0.3062454773532,0.192687675289379,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,1.60342272946051,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0391253762538,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:240256439..240256449,- | |short_description=p@chr1:240256439..240256449,- | ||
}} | }} |
Latest revision as of 05:39, 28 July 2015
Short description: | p@chr1:240256439..240256449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240256439..240256449, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.47e-36 | 23 |
fibroblast | 1.55e-23 | 76 |
hair follicle cell | 3.60e-09 | 5 |
hair follicle dermal papilla cell | 2.48e-07 | 3 |
stem cell of epidermis | 2.48e-07 | 3 |
visceral preadipocyte | 9.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.70e-32 | 41 |
integument | 1.81e-31 | 46 |
integumental system | 1.81e-31 | 46 |
surface structure | 4.15e-25 | 99 |
hair follicle | 3.60e-09 | 5 |
hair follicle placode | 3.60e-09 | 5 |
dermal papilla | 2.48e-07 | 3 |
papillary layer of dermis | 2.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.49e-22 | 5 |
myotonic disease | 2.49e-22 | 5 |
muscle tissue disease | 2.49e-22 | 5 |
myopathy | 2.49e-22 | 5 |
muscular disease | 2.49e-22 | 5 |
myotonic dystrophy | 2.49e-22 | 5 |
cell type benign neoplasm | 1.65e-14 | 3 |
leiomyoma | 1.65e-14 | 3 |
benign neoplasm | 5.31e-11 | 4 |