FFCP PHASE1:Hg19::chr1:26602990..26603008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:26602990..26603008,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr1:26602990..26603008,+ | |description=CAGE_peak_at_chr1:26602990..26603008,+ | ||
Latest revision as of 06:34, 28 July 2015
| Short description: | p@chr1:26602990..26603008, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:26602990..26603008, + |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:26602990..26603008+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 7.35e-116 | 42 |
| CD14-positive, CD16-negative classical monocyte | 7.35e-116 | 42 |
| defensive cell | 8.67e-113 | 48 |
| phagocyte | 8.67e-113 | 48 |
| granulocyte monocyte progenitor cell | 2.19e-107 | 67 |
| myeloid lineage restricted progenitor cell | 1.23e-103 | 66 |
| myeloid leukocyte | 2.83e-99 | 72 |
| macrophage dendritic cell progenitor | 1.01e-90 | 61 |
| monopoietic cell | 1.11e-88 | 59 |
| monocyte | 1.11e-88 | 59 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.67e-98 | 76 |
| bone element | 8.75e-91 | 82 |
| skeletal element | 4.48e-82 | 90 |
| immune system | 3.43e-79 | 93 |
| hematopoietic system | 9.01e-75 | 98 |
| blood island | 9.01e-75 | 98 |
| skeletal system | 3.98e-73 | 100 |
| hemolymphoid system | 3.79e-67 | 108 |
| musculoskeletal system | 8.21e-43 | 167 |
| lateral plate mesoderm | 9.41e-34 | 203 |
Showing 1 to 10 of 14 entries
