FFCP PHASE1:Hg19::chr20:17487013..17487035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:17487013..17487035,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr20:17487013..17487035,+ | |description=CAGE_peak_at_chr20:17487013..17487035,+ | ||
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|ontology_enrichment_celltype=CL:0000625!6.48e-11!11;CL:0000084!1.21e-10!25;CL:0000827!1.21e-10!25;CL:0000791!1.70e-09!18;CL:0000789!1.70e-09!18;CL:0002420!1.70e-09!18;CL:0002419!1.70e-09!18;CL:0000790!1.70e-09!18;CL:0000080!9.65e-09!6;CL:0000623!3.48e-07!3;CL:0000825!3.48e-07!3 | |ontology_enrichment_celltype=CL:0000625!6.48e-11!11;CL:0000084!1.21e-10!25;CL:0000827!1.21e-10!25;CL:0000791!1.70e-09!18;CL:0000789!1.70e-09!18;CL:0002420!1.70e-09!18;CL:0002419!1.70e-09!18;CL:0000790!1.70e-09!18;CL:0000080!9.65e-09!6;CL:0000623!3.48e-07!3;CL:0000825!3.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.41e-21;3!CL:0002127;7.57e-17;1!CL:0000911;7.57e-17;1!CL:0000814;7.57e-17;1!CL:0000791;3.27e-08;18!CL:0000789;3.27e-08;18!CL:0002419;3.27e-08;18 | |ontology_enrichment_celltype_v019=CL:0000623;2.41e-21;3!CL:0002127;7.57e-17;1!CL:0000911;7.57e-17;1!CL:0000814;7.57e-17;1!CL:0000791;3.27e-08;18!CL:0000789;3.27e-08;18!CL:0002419;3.27e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.67e-21,3;CL:0000825,2.67e-21,3;CL:0002127,7.57e-17,1;CL:0000914,7.57e-17,1;CL:0000911,7.57e-17,1;CL:0000814,7.57e-17,1;CL:0002042,7.57e-17,1;CL:0002039,7.57e-17,1;CL:0002040,7.57e-17,1;CL:0002041,7.57e-17,1;CL:0000893,4.34e-09,2;CL:0002489,4.34e-09,2;CL:0000809,4.34e-09,2;CL:0000808,4.34e-09,2;CL:0000894,4.34e-09,2;CL:0000806,4.34e-09,2;CL:0000807,4.34e-09,2;CL:0000805,4.34e-09,2;CL:0002425,4.34e-09,2;CL:0000791,3.23e-08,18;CL:0000789,3.23e-08,18;CL:0002420,3.23e-08,18;CL:0002419,3.23e-08,18;CL:0000790,3.23e-08,18;CL:0000988,1.17e-07,177;CL:0000838,2.45e-07,52;CL:0000542,3.38e-07,53;CL:0000051,3.38e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002425;4.34e-09;2!CL:0000790;3.27e-08;18 | |ontology_enrichment_development_v019=CL:0002425;4.34e-09;2!CL:0000790;3.27e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.12e-12!15;UBERON:0000179!5.12e-12!15;UBERON:0000463!5.12e-12!15 | |ontology_enrichment_uberon=UBERON:0000178!5.12e-12!15;UBERON:0000179!5.12e-12!15;UBERON:0000463!5.12e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.31e-17;15!UBERON:0000179;6.31e-17;15!UBERON:0000463;6.31e-17;15!UBERON:0002331;1.07e-14;10!UBERON:0002390;1.07e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.31e-17;15!UBERON:0000179;6.31e-17;15!UBERON:0000463;6.31e-17;15!UBERON:0002331;1.07e-14;10!UBERON:0002390;1.07e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.31e-17,15;UBERON:0000179,6.31e-17,15;UBERON:0000463,6.31e-17,15;UBERON:0002331,1.07e-14,10;UBERON:0000358,1.07e-14,10;UBERON:0000307,1.07e-14,10;UBERON:0000091,1.07e-14,10;UBERON:0000087,1.07e-14,10;UBERON:0007010,1.07e-14,10;UBERON:0007806,1.07e-14,10;UBERON:0008780,1.07e-14,10;UBERON:0005728,1.07e-14,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.339928028092699,0.383220493601921,0,0,0.95569624297229,0,0,0.752875595388864,1.15187950038977,2.49861453104692,0.947109008176067,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7777064152621,3.74358444383662,3.01878604803324,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.640365346820666,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0.507447609232169,0,0,0.952927101831156,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0.179021174675609,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,22.8321269084079,20.5116138651195,13.5748534357092,0,0,0,0,0.391329237864179,0,0,0,0,0,2.55549813004637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,3.94044099596827,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0.570930667089935,0,0,0,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr20:17487013..17487035,+ | |short_description=p@chr20:17487013..17487035,+ | ||
}} | }} |
Latest revision as of 12:04, 28 July 2015
Short description: | p@chr20:17487013..17487035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:17487013..17487035, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.67e-21 | 3 |
pro-NK cell | 2.67e-21 | 3 |
innate effector T cell | 7.57e-17 | 1 |
immature NK T cell | 7.57e-17 | 1 |
effector T cell | 7.57e-17 | 1 |
mature NK T cell | 7.57e-17 | 1 |
immature NK T cell stage IV | 7.57e-17 | 1 |
immature NK T cell stage I | 7.57e-17 | 1 |
immature NK T cell stage II | 7.57e-17 | 1 |
immature NK T cell stage III | 7.57e-17 | 1 |
thymocyte | 4.34e-09 | 2 |
double negative thymocyte | 4.34e-09 | 2 |
double-positive, alpha-beta thymocyte | 4.34e-09 | 2 |
DN4 thymocyte | 4.34e-09 | 2 |
DN1 thymic pro-T cell | 4.34e-09 | 2 |
DN2 thymocyte | 4.34e-09 | 2 |
DN3 thymocyte | 4.34e-09 | 2 |
immature single positive thymocyte | 4.34e-09 | 2 |
early T lineage precursor | 4.34e-09 | 2 |
mature alpha-beta T cell | 3.23e-08 | 18 |
alpha-beta T cell | 3.23e-08 | 18 |
immature T cell | 3.23e-08 | 18 |
mature T cell | 3.23e-08 | 18 |
immature alpha-beta T cell | 3.23e-08 | 18 |
hematopoietic cell | 1.17e-07 | 177 |
lymphoid lineage restricted progenitor cell | 2.45e-07 | 52 |
lymphocyte | 3.38e-07 | 53 |
common lymphoid progenitor | 3.38e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 6.31e-17 | 15 |
haemolymphatic fluid | 6.31e-17 | 15 |
organism substance | 6.31e-17 | 15 |
umbilical cord | 1.07e-14 | 10 |
blastocyst | 1.07e-14 | 10 |
blastula | 1.07e-14 | 10 |
bilaminar disc | 1.07e-14 | 10 |
inner cell mass | 1.07e-14 | 10 |
cleaving embryo | 1.07e-14 | 10 |
connecting stalk | 1.07e-14 | 10 |
inner cell mass derived epiblast | 1.07e-14 | 10 |
extraembryonic mesoderm | 1.07e-14 | 10 |