FFCP PHASE1:Hg19::chr20:21143609..21143631,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:21143609..21143631,+ | |||
|coexpression_cluster_id=C1670 | |||
|description=CAGE_peak_at_chr20:21143609..21143631,+ | |||
|id=chr20:21143609..21143631,+ | |||
|ontology_enrichment_celltype=CL:0000244!1.50e-13!4;CL:0000731!1.50e-13!4;CL:0002076!1.79e-12!43;CL:0000223!5.64e-12!59;CL:0002166!8.98e-11!3;CL:0000066!1.47e-10!254;CL:0002621!3.30e-10!3;CL:0002159!2.26e-08!13;CL:0002368!5.38e-08!13;CL:0002327!6.92e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.53e-35;4!CL:0000731;1.53e-35;4!CL:0002166;1.17e-27;3!CL:0002327;5.77e-20;4!CL:0002159;1.12e-15;14!CL:0002621;1.33e-12;3!CL:0002076;9.76e-12;42!CL:0002077;7.16e-08;34!CL:0002251;3.80e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.53e-35,4;CL:0000731,1.53e-35,4;CL:0002166,1.22e-27,3;CL:0002327,4.03e-20,4;CL:0002159,1.26e-15,14;CL:0000066,6.89e-15,253;CL:0002621,1.59e-12,3;CL:0002076,4.62e-12,42;CL:0002077,8.13e-09,34;CL:0000223,1.86e-08,58;CL:0002251,3.96e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.01e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.87e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.78e-16!5;UBERON:0005910!1.70e-13!6;UBERON:0001949!3.30e-10!3;UBERON:0003729!5.64e-10!5;UBERON:0000161!7.27e-10!35;UBERON:0004119!6.63e-09!169;UBERON:0000925!6.63e-09!169;UBERON:0006595!6.63e-09!169;UBERON:0002090!1.07e-08!6;UBERON:0001708!3.72e-08!4;UBERON:0001704!3.72e-08!4;UBERON:0001911!6.92e-08!4;UBERON:0005333!6.92e-08!4;UBERON:0008425!6.92e-08!4;UBERON:0005311!6.92e-08!4;UBERON:0003343!2.07e-07!4;UBERON:0004785!2.07e-07!4;UBERON:0001255!5.02e-07!2;UBERON:0001556!5.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.65e-28;5!UBERON:0000486;6.26e-26;12!UBERON:0005910;8.23e-24;6!UBERON:0001708;6.54e-21;4!UBERON:0008895;6.54e-21;4!UBERON:0001911;5.77e-20;4!UBERON:0011159;7.50e-17;5!UBERON:0001949;1.33e-12;3!UBERON:0003729;6.47e-11;13!UBERON:0003343;1.31e-09;4!UBERON:0004785;1.31e-09;4!UBERON:0011137;6.15e-08;11!UBERON:0010323;6.15e-08;11!UBERON:0000161;1.62e-07;19!UBERON:0000166;1.62e-07;19!UBERON:0000344;3.80e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.66e-28,5;UBERON:0005910,8.23e-24,6;UBERON:0001708,6.77e-21,4;UBERON:0008895,6.77e-21,4;UBERON:0001911,4.03e-20,4;UBERON:0005333,4.03e-20,4;UBERON:0008425,4.03e-20,4;UBERON:0005311,4.03e-20,4;UBERON:0011159,7.70e-17,5;UBERON:0010188,3.96e-14,6;UBERON:0002539,3.96e-14,6;UBERON:0008816,3.96e-14,6;UBERON:0001949,1.59e-12,3;UBERON:0003729,6.91e-11,13;UBERON:0000076,2.38e-10,8;UBERON:0003343,1.28e-09,4;UBERON:0004785,1.28e-09,4;UBERON:0010323,6.22e-08,11;UBERON:0003102,3.09e-07,99;UBERON:0000344,3.96e-07,20;UBERON:0000033,5.92e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,8.45512973831587,1.14721838155602,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08525542276389,0,0.603173834469785,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5587818169587,7.72717789714754,11.4837828766333,1.43293636324557,7.84711633987697,1.91691339582606,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,1.00253235151642,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0.145016693914229,0,0,1.98341898433174,0.576570202095319,2.29702882490251,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.25088746543166,0,0,0,6.88808596273968,3.36942951335251,2.21715076768338,13.5536806122106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.83654246567162,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18330626556461,0.11796972334774,1.28400018965175,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,15.1744794837747,0,0,0.458729283404541,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:21143609..21143631,+ | |||
}} |
Latest revision as of 12:22, 28 July 2015
Short description: | p@chr20:21143609..21143631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21143609..21143631, + |
Coexpression cluster: | C1670_Urothelial_Mallassezderived_squamous_Gingival_Mammary_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.53e-35 | 4 |
urothelial cell | 1.53e-35 | 4 |
epithelial cell of Malassez | 1.22e-27 | 3 |
mammary gland epithelial cell | 4.03e-20 | 4 |
general ecto-epithelial cell | 1.26e-15 | 14 |
epithelial cell | 6.89e-15 | 253 |
gingival epithelial cell | 1.59e-12 | 3 |
endo-epithelial cell | 4.62e-12 | 42 |
ecto-epithelial cell | 8.13e-09 | 34 |
endodermal cell | 1.86e-08 | 58 |
epithelial cell of alimentary canal | 3.96e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.66e-28 | 5 |
transitional epithelium | 8.23e-24 | 6 |
jaw skeleton | 6.77e-21 | 4 |
splanchnocranium | 6.77e-21 | 4 |
mammary gland | 4.03e-20 | 4 |
mammary bud | 4.03e-20 | 4 |
mammary ridge | 4.03e-20 | 4 |
mammary placode | 4.03e-20 | 4 |
primary subdivision of cranial skeletal system | 7.70e-17 | 5 |
protuberance | 3.96e-14 | 6 |
pharyngeal arch | 3.96e-14 | 6 |
embryonic head | 3.96e-14 | 6 |
gingival epithelium | 1.59e-12 | 3 |
mouth mucosa | 6.91e-11 | 13 |
external ectoderm | 2.38e-10 | 8 |
mucosa of oral region | 1.28e-09 | 4 |
respiratory system mucosa | 1.28e-09 | 4 |
cranial skeletal system | 6.22e-08 | 11 |
surface structure | 3.09e-07 | 99 |
mucosa | 3.96e-07 | 20 |
head | 5.92e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.87e-10 | 14 |