FFCP PHASE1:Hg19::chr20:24939621..24939641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:24939621..24939641,- | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_at_chr20:24939621..24939641,- | |description=CAGE_peak_at_chr20:24939621..24939641,- | ||
|id=chr20:24939621..24939641,- | |id=chr20:24939621..24939641,- | ||
|ontology_enrichment_celltype=CL:0000037!1.99e-28!172;CL:0000566!1.99e-28!172;CL:0000988!7.06e-26!182;CL:0002032!2.80e-25!165;CL:0000837!2.80e-25!165;CL:0000738!1.73e-18!140;CL:0000763!1.37e-17!112;CL:0000049!1.37e-17!112;CL:0000990!7.55e-14!8;CL:0000084!3.97e-12!25;CL:0000827!3.97e-12!25;CL:0000451!5.26e-11!10;CL:0000453!8.91e-11!5;CL:0002031!6.46e-10!124;CL:0000791!3.01e-09!18;CL:0000789!3.01e-09!18;CL:0002420!3.01e-09!18;CL:0002419!3.01e-09!18;CL:0000790!3.01e-09!18;CL:0002087!1.89e-08!119;CL:0000625!2.66e-08!11;CL:0000840!2.81e-08!5;CL:0001029!2.81e-08!5;CL:0000838!1.05e-07!52;CL:0000623!1.24e-07!3;CL:0000825!1.24e-07!3;CL:0000542!1.79e-07!53;CL:0000051!1.79e-07!53;CL:0000775!4.96e-07!3;CL:0000842!9.84e-07!3 | |ontology_enrichment_celltype=CL:0000037!1.99e-28!172;CL:0000566!1.99e-28!172;CL:0000988!7.06e-26!182;CL:0002032!2.80e-25!165;CL:0000837!2.80e-25!165;CL:0000738!1.73e-18!140;CL:0000763!1.37e-17!112;CL:0000049!1.37e-17!112;CL:0000990!7.55e-14!8;CL:0000084!3.97e-12!25;CL:0000827!3.97e-12!25;CL:0000451!5.26e-11!10;CL:0000453!8.91e-11!5;CL:0002031!6.46e-10!124;CL:0000791!3.01e-09!18;CL:0000789!3.01e-09!18;CL:0002420!3.01e-09!18;CL:0002419!3.01e-09!18;CL:0000790!3.01e-09!18;CL:0002087!1.89e-08!119;CL:0000625!2.66e-08!11;CL:0000840!2.81e-08!5;CL:0001029!2.81e-08!5;CL:0000838!1.05e-07!52;CL:0000623!1.24e-07!3;CL:0000825!1.24e-07!3;CL:0000542!1.79e-07!53;CL:0000051!1.79e-07!53;CL:0000775!4.96e-07!3;CL:0000842!9.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.12e-21;3!CL:0000453;6.15e-13;5!CL:0000775;9.59e-10;3!CL:0002127;1.65e-08;1!CL:0000911;1.65e-08;1!CL:0000814;1.65e-08;1!CL:0000990;2.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.79e-22,3;CL:0000825,9.79e-22,3;CL:0000037,1.17e-16,168;CL:0002032,7.34e-16,161;CL:0000837,7.34e-16,161;CL:0000988,1.36e-15,177;CL:0000453,6.54e-13,5;CL:0000775,9.38e-10,3;CL:0000763,3.26e-09,108;CL:0000049,3.26e-09,108;CL:0002127,1.65e-08,1;CL:0000914,1.65e-08,1;CL:0000911,1.65e-08,1;CL:0000814,1.65e-08,1;CL:0002042,1.65e-08,1;CL:0002039,1.65e-08,1;CL:0002040,1.65e-08,1;CL:0002041,1.65e-08,1;CL:0000738,3.67e-08,136;CL:0000990,2.22e-07,8;CL:0000838,2.31e-07,52;CL:0000542,3.34e-07,53;CL:0000051,3.34e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.54e-13!39;DOID:2531!1.13e-11!51;DOID:0060083!1.13e-11!51;DOID:8692!4.45e-11!31 | |ontology_enrichment_disease=DOID:1240!1.54e-13!39;DOID:2531!1.13e-11!51;DOID:0060083!1.13e-11!51;DOID:8692!4.45e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.88e-12;31!DOID:1240;3.60e-11;39!DOID:2531;1.01e-08;51!DOID:0060083;1.01e-08;51!DOID:8552;8.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.41e-12,31;DOID:1240,1.84e-12,39;DOID:2531,2.30e-11,51;DOID:0060083,2.30e-11,51;DOID:8552,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.13e-14!15;UBERON:0000179!2.13e-14!15;UBERON:0000463!2.13e-14!15;UBERON:0002390!6.93e-12!102;UBERON:0003061!6.93e-12!102;UBERON:0002193!7.09e-11!112 | |ontology_enrichment_uberon=UBERON:0000178!2.13e-14!15;UBERON:0000179!2.13e-14!15;UBERON:0000463!2.13e-14!15;UBERON:0002390!6.93e-12!102;UBERON:0003061!6.93e-12!102;UBERON:0002193!7.09e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-15;15!UBERON:0000179;1.69e-15;15!UBERON:0000463;1.69e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.02e-15,15;UBERON:0000179,2.02e-15,15;UBERON:0000463,2.02e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.30206522429511,0,0,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0.393010762749165,0.205601498999509,0,0,0,0,0.668462741311041,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.657751618414705,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0.95569624297229,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,4.83856183739358,3.7441627409691,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.97364218096405,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5623024232168,4.92576900504818,3.88129634747131,5.39040752374943,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,3.98753031021914,1.19115887728894,0.411362273086194,0.648473311192717,0,2.37937552888281,0,0,0,0,0,0.355709216742071,0.637705090915289,1.39705560002972,0,0,0,2.80797178113459,1.36940807419915,2.6635582281414,0,0,1.1241165257259,0.80719882876419,0,3.43505344755765,0,0,0,0.781552381608161,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,1.48323486804084,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22109179417114,1.32969345520125,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92290463259083,3.05589132720735,3.43487327937273,1.63804924423206,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.30206522429511,0,0,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0.393010762749165,0.205601498999509,0,0,0,0,0.668462741311041,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.657751618414705,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0.95569624297229,0.651083453856419,0,0.150575119077773,0,0,0,0.821127996921047,4.83856183739358,3.7441627409691,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.97364218096405,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0.621984346622316,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5623024232168,4.92576900504818,3.88129634747131,5.39040752374943,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.431428401637234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,3.98753031021914,1.19115887728894,0.411362273086194,0.648473311192717,0,2.37937552888281,0,0,0,0,0,0.355709216742071,0.637705090915289,1.39705560002972,0,0,0,2.80797178113459,1.36940807419915,2.6635582281414,0,0,1.1241165257259,0.80719882876419,0,3.43505344755765,0,0,0,0.781552381608161,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,1.48323486804084,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22109179417114,1.32969345520125,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92290463259083,3.05589132720735,3.43487327937273,1.63804924423206,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:24939621..24939641,- | |short_description=p@chr20:24939621..24939641,- | ||
}} | }} |
Latest revision as of 12:39, 28 July 2015
Short description: | p@chr20:24939621..24939641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:24939621..24939641, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.79e-22 | 3 |
pro-NK cell | 9.79e-22 | 3 |
hematopoietic stem cell | 1.17e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.34e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.34e-16 | 161 |
hematopoietic cell | 1.36e-15 | 177 |
Langerhans cell | 6.54e-13 | 5 |
neutrophil | 9.38e-10 | 3 |
myeloid cell | 3.26e-09 | 108 |
common myeloid progenitor | 3.26e-09 | 108 |
innate effector T cell | 1.65e-08 | 1 |
immature NK T cell | 1.65e-08 | 1 |
effector T cell | 1.65e-08 | 1 |
mature NK T cell | 1.65e-08 | 1 |
immature NK T cell stage IV | 1.65e-08 | 1 |
immature NK T cell stage I | 1.65e-08 | 1 |
immature NK T cell stage II | 1.65e-08 | 1 |
immature NK T cell stage III | 1.65e-08 | 1 |
leukocyte | 3.67e-08 | 136 |
conventional dendritic cell | 2.22e-07 | 8 |
lymphoid lineage restricted progenitor cell | 2.31e-07 | 52 |
lymphocyte | 3.34e-07 | 53 |
common lymphoid progenitor | 3.34e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 2.02e-15 | 15 |
haemolymphatic fluid | 2.02e-15 | 15 |
organism substance | 2.02e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.41e-12 | 31 |
leukemia | 1.84e-12 | 39 |
hematologic cancer | 2.30e-11 | 51 |
immune system cancer | 2.30e-11 | 51 |
chronic myeloid leukemia | 9.29e-08 | 1 |