FFCP PHASE1:Hg19::chr20:35861148..35861151,+: Difference between revisions
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|id=chr20:35861148..35861151,+
|short_description=p@chr20:35861148..35861151,+
|description=CAGE_peak_at_chr20:35861148..35861151,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35861148..35861151,+ | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_at_chr20:35861148..35861151,+ | |||
|id=chr20:35861148..35861151,+ | |||
|ontology_enrichment_celltype=CL:0002605!8.17e-60!3;CL:0000064!6.92e-27!3;CL:0005012!6.92e-27!3;CL:0000067!6.92e-27!3;CL:0002304!6.92e-27!3;CL:0000128!3.76e-26!7;CL:0000126!3.76e-26!7;CL:0000127!3.76e-26!7;CL:0002453!3.76e-26!7;CL:0000133!1.26e-15!59;CL:0000221!5.02e-13!71;CL:0000075!4.59e-12!27;CL:0000333!1.14e-11!41;CL:0000243!3.43e-11!15;CL:0000125!3.43e-11!15;CL:0000030!3.43e-11!15;CL:0000339!3.43e-11!15;CL:0000095!4.44e-10!17;CL:0000123!4.44e-10!17;CL:0000710!1.88e-09!20;CL:0002319!2.90e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.96e-34;3!CL:0000306;5.56e-26;4!CL:0002222;5.56e-26;4!CL:0002224;5.56e-26;4!CL:0000128;1.91e-15;7!CL:0000126;1.91e-15;7!CL:0000127;1.91e-15;7!CL:0000243;3.58e-07;15!CL:0000125;3.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.96e-34,3;CL:0000306,5.56e-26,4;CL:0002222,5.56e-26,4;CL:0002224,5.56e-26,4;CL:0000128,1.91e-15,7;CL:0000126,1.91e-15,7;CL:0000127,1.91e-15,7;CL:0002453,1.91e-15,7;CL:0000243,3.58e-07,15;CL:0000125,3.58e-07,15;CL:0000030,3.58e-07,15;CL:0000339,3.58e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;3.58e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!6.92e-27!3;UBERON:0001775!6.92e-27!3;UBERON:0000488!1.90e-20!4;UBERON:0007625!8.34e-17!11;UBERON:0003056!1.85e-15!61;UBERON:0003075!2.86e-14!86;UBERON:0007284!2.86e-14!86;UBERON:0002203!5.53e-14!6;UBERON:0001768!5.53e-14!6;UBERON:0002346!1.25e-13!90;UBERON:0001801!2.35e-13!14;UBERON:0000956!1.21e-12!25;UBERON:0000203!1.21e-12!25;UBERON:0001869!4.86e-10!32;UBERON:0000019!5.18e-10!19;UBERON:0000047!5.18e-10!19;UBERON:0004088!5.18e-10!19;UBERON:0003072!5.18e-10!19;UBERON:0003071!5.18e-10!19;UBERON:0004128!5.18e-10!19;UBERON:0002791!9.38e-10!33;UBERON:0000970!1.53e-09!20;UBERON:0002020!1.74e-09!34;UBERON:0003528!1.74e-09!34;UBERON:0001893!1.74e-09!34;UBERON:0002104!4.08e-09!21;UBERON:0001456!4.08e-09!21;UBERON:0004121!6.41e-09!169;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0000924!1.05e-08!173;UBERON:0006601!1.05e-08!173;UBERON:0000020!2.25e-08!23;UBERON:0002200!4.66e-08!11;UBERON:0006876!4.66e-08!11;UBERON:0001032!4.75e-08!24;UBERON:0004456!4.75e-08!24;UBERON:0002240!5.54e-08!3;UBERON:0002780!5.91e-08!41;UBERON:0001890!5.91e-08!41;UBERON:0006240!5.91e-08!41;UBERON:0003080!8.90e-08!42;UBERON:0000033!1.57e-07!123;UBERON:0000073!2.63e-07!94;UBERON:0001016!2.63e-07!94;UBERON:0000153!3.61e-07!129;UBERON:0007811!3.61e-07!129;UBERON:0005085!9.31e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;5.56e-26;4!UBERON:0005389;5.56e-26;4!UBERON:0000484;5.56e-26;4!UBERON:0000965;5.56e-26;4!UBERON:0001803;5.56e-26;4!UBERON:0007625;2.16e-10;11!UBERON:0001801;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,5.56e-26,4;UBERON:0005389,5.56e-26,4;UBERON:0000484,5.56e-26,4;UBERON:0002546,5.56e-26,4;UBERON:0000965,5.56e-26,4;UBERON:0001803,5.56e-26,4;UBERON:0003073,5.56e-26,4;UBERON:0005426,5.56e-26,4;UBERON:0000076,9.39e-14,8;UBERON:0007625,2.16e-10,11;UBERON:0001801,1.86e-08,14;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p@chr20:35861148..35861151,+ | |||
}} | }} |
Latest revision as of 13:42, 28 July 2015
Short description: | p@chr20:35861148..35861151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35861148..35861151, + |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.96e-34 | 3 |
crystallin accumulating cell | 5.56e-26 | 4 |
vertebrate lens cell | 5.56e-26 | 4 |
lens epithelial cell | 5.56e-26 | 4 |
oligodendrocyte | 1.91e-15 | 7 |
macroglial cell | 1.91e-15 | 7 |
astrocyte | 1.91e-15 | 7 |
oligodendrocyte precursor cell | 1.91e-15 | 7 |
glial cell (sensu Vertebrata) | 3.58e-07 | 15 |
glial cell | 3.58e-07 | 15 |
glioblast | 3.58e-07 | 15 |
glioblast (sensu Vertebrata) | 3.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 5.56e-26 | 4 |
transparent eye structure | 5.56e-26 | 4 |
simple cuboidal epithelium | 5.56e-26 | 4 |
cranial placode | 5.56e-26 | 4 |
lens of camera-type eye | 5.56e-26 | 4 |
epithelium of lens | 5.56e-26 | 4 |
lens placode | 5.56e-26 | 4 |
lens vesicle | 5.56e-26 | 4 |
external ectoderm | 9.39e-14 | 8 |
pigment epithelium of eye | 2.16e-10 | 11 |
anterior segment of eyeball | 1.86e-08 | 14 |
pre-chordal neural plate | 1.20e-07 | 61 |