FFCP PHASE1:Hg19::chr20:48211160..48211182,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48211160..48211182,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr20:48211160..48211182,+ | |description=CAGE_peak_at_chr20:48211160..48211182,+ | ||
|id=chr20:48211160..48211182,+ | |id=chr20:48211160..48211182,+ | ||
|ontology_enrichment_celltype=CL:0000623!2.68e-15!3;CL:0000825!2.68e-15!3;CL:0000893!1.91e-11!2;CL:0002489!1.91e-11!2;CL:0000809!1.91e-11!2;CL:0000808!1.91e-11!2;CL:0000894!1.91e-11!2;CL:0000806!1.91e-11!2;CL:0000807!1.91e-11!2;CL:0000805!1.91e-11!2;CL:0002425!1.91e-11!2;CL:0000084!5.44e-09!25;CL:0000827!5.44e-09!25;CL:0000838!9.63e-08!52;CL:0000542!1.46e-07!53;CL:0000051!1.46e-07!53;CL:0000791!8.14e-07!18;CL:0000789!8.14e-07!18;CL:0002420!8.14e-07!18;CL:0002419!8.14e-07!18;CL:0000790!8.14e-07!18 | |ontology_enrichment_celltype=CL:0000623!2.68e-15!3;CL:0000825!2.68e-15!3;CL:0000893!1.91e-11!2;CL:0002489!1.91e-11!2;CL:0000809!1.91e-11!2;CL:0000808!1.91e-11!2;CL:0000894!1.91e-11!2;CL:0000806!1.91e-11!2;CL:0000807!1.91e-11!2;CL:0000805!1.91e-11!2;CL:0002425!1.91e-11!2;CL:0000084!5.44e-09!25;CL:0000827!5.44e-09!25;CL:0000838!9.63e-08!52;CL:0000542!1.46e-07!53;CL:0000051!1.46e-07!53;CL:0000791!8.14e-07!18;CL:0000789!8.14e-07!18;CL:0002420!8.14e-07!18;CL:0002419!8.14e-07!18;CL:0000790!8.14e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.13e-23;1!CL:0000911;5.13e-23;1!CL:0000814;5.13e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.13e-23,1;CL:0000914,5.13e-23,1;CL:0000911,5.13e-23,1;CL:0000814,5.13e-23,1;CL:0002042,5.13e-23,1;CL:0002039,5.13e-23,1;CL:0002040,5.13e-23,1;CL:0002041,5.13e-23,1;CL:0000893,3.24e-12,2;CL:0002489,3.24e-12,2;CL:0000809,3.24e-12,2;CL:0000808,3.24e-12,2;CL:0000894,3.24e-12,2;CL:0000806,3.24e-12,2;CL:0000807,3.24e-12,2;CL:0000805,3.24e-12,2;CL:0002425,3.24e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.24e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.95e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.63e-07,4;UBERON:0005058,9.63e-07,4;UBERON:0009113,9.63e-07,4;UBERON:0003295,9.63e-07,4;UBERON:0005562,9.63e-07,4 | |||
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|short_description=p@chr20:48211160..48211182,+ | |short_description=p@chr20:48211160..48211182,+ | ||
}} | }} |
Latest revision as of 15:03, 28 July 2015
Short description: | p@chr20:48211160..48211182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48211160..48211182, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.13e-23 | 1 |
immature NK T cell | 5.13e-23 | 1 |
effector T cell | 5.13e-23 | 1 |
mature NK T cell | 5.13e-23 | 1 |
immature NK T cell stage IV | 5.13e-23 | 1 |
immature NK T cell stage I | 5.13e-23 | 1 |
immature NK T cell stage II | 5.13e-23 | 1 |
immature NK T cell stage III | 5.13e-23 | 1 |
thymocyte | 3.24e-12 | 2 |
double negative thymocyte | 3.24e-12 | 2 |
double-positive, alpha-beta thymocyte | 3.24e-12 | 2 |
DN4 thymocyte | 3.24e-12 | 2 |
DN1 thymic pro-T cell | 3.24e-12 | 2 |
DN2 thymocyte | 3.24e-12 | 2 |
DN3 thymocyte | 3.24e-12 | 2 |
immature single positive thymocyte | 3.24e-12 | 2 |
early T lineage precursor | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.63e-07 | 4 |
hemolymphoid system gland | 9.63e-07 | 4 |
thymic region | 9.63e-07 | 4 |
pharyngeal gland | 9.63e-07 | 4 |
thymus primordium | 9.63e-07 | 4 |