FFCP PHASE1:Hg19::chr20:49983328..49983340,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:49983328..49983340,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr20:49983328..49983340,+ | |||
|id=chr20:49983328..49983340,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.30e-09!7;CL:0000126!1.30e-09!7;CL:0000127!1.30e-09!7;CL:0002453!1.30e-09!7;CL:0000064!3.82e-09!3;CL:0005012!3.82e-09!3;CL:0000067!3.82e-09!3;CL:0002304!3.82e-09!3;CL:0000708!1.57e-08!3;CL:0002605!1.99e-08!3;CL:0000062!2.59e-08!11;CL:0000375!2.59e-08!11;CL:0000335!2.59e-08!11;CL:0000548!7.50e-07!679;CL:0000004!7.50e-07!679;CL:0000255!7.50e-07!679;CL:0000054!9.09e-07!2;CL:0000137!9.09e-07!2;CL:0000092!9.09e-07!2;CL:0000012!9.59e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002379;2.78e-26;1!CL:0002262;1.14e-13;2!CL:1000398;1.14e-13;2!CL:0002570;2.49e-13;8!CL:0000064;1.47e-09;3!CL:0000067;1.47e-09;3!CL:0005012;1.47e-09;3!CL:0002304;1.47e-09;3!CL:0002166;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.78e-26,1;CL:0002262,9.40e-14,2;CL:1000398,9.40e-14,2;CL:0002570,2.07e-13,8;CL:0000064,1.54e-09,3;CL:0000067,1.54e-09,3;CL:0005012,1.54e-09,3;CL:0002304,1.54e-09,3;CL:0002166,1.81e-09,3;CL:0002077,3.29e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.34e-11!14;DOID:193!2.96e-09!29;DOID:120!2.75e-08!27;DOID:200!9.09e-07!2;DOID:4305!9.09e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3620;2.78e-26;1!DOID:3565;2.78e-26;1!DOID:3093;2.34e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.78e-26,1;DOID:3565,2.78e-26,1;DOID:3093,2.35e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.57e-11!4;UBERON:0001778!3.82e-09!3;UBERON:0001775!3.82e-09!3;UBERON:0003210!1.57e-08!3;UBERON:0002203!1.15e-07!6;UBERON:0001768!1.15e-07!6;UBERON:0000992!3.97e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.14e-13;2!UBERON:0003497;1.14e-13;2!UBERON:0003909;1.14e-13;2!UBERON:0003835;1.14e-13;2!UBERON:0001778;1.47e-09;3!UBERON:0001280;1.47e-09;3!UBERON:0004647;1.47e-09;3!UBERON:0001775;1.47e-09;3!UBERON:0001013;5.00e-08;14!UBERON:0001708;1.75e-07;4!UBERON:0000488;1.75e-07;4!UBERON:0008895;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.40e-14,2;UBERON:0003497,9.40e-14,2;UBERON:0003909,9.40e-14,2;UBERON:0003835,9.40e-14,2;UBERON:0001280,1.30e-09,3;UBERON:0004647,1.30e-09,3;UBERON:0005171,1.30e-09,3;UBERON:0001778,1.54e-09,3;UBERON:0001775,1.54e-09,3;UBERON:0001013,4.49e-08,14;UBERON:0000488,1.80e-07,4;UBERON:0001708,2.04e-07,4;UBERON:0008895,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,1.10864698731282,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,1.00789276919316,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.36669142910475,0,0,1.690605505112,0,0,0,0,0,0,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,6.54519568013791,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.822251547880505,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58792401667989,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.295710299979268,0.318593534327405,0.899606224327209,0.155262956876259,0,0.53168342911599,0,0.601030435988874,0,0,0.363697318405119,1.07410557042488,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:49983328..49983340,+ | |||
}} |
Latest revision as of 15:19, 28 July 2015
Short description: | p@chr20:49983328..49983340, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49983328..49983340, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.78e-26 | 1 |
endothelial cell of sinusoid | 9.40e-14 | 2 |
endothelial cell of hepatic sinusoid | 9.40e-14 | 2 |
mesenchymal stem cell of adipose | 2.07e-13 | 8 |
ciliated cell | 1.54e-09 | 3 |
ciliated epithelial cell | 1.54e-09 | 3 |
multi-ciliated epithelial cell | 1.54e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.54e-09 | 3 |
epithelial cell of Malassez | 1.81e-09 | 3 |
ecto-epithelial cell | 3.29e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.40e-14 | 2 |
abdomen blood vessel | 9.40e-14 | 2 |
sinusoid | 9.40e-14 | 2 |
abdominal segment blood vessel | 9.40e-14 | 2 |
liver parenchyma | 1.30e-09 | 3 |
liver lobule | 1.30e-09 | 3 |
hepatic duct | 1.30e-09 | 3 |
ciliary epithelium | 1.54e-09 | 3 |
ciliary body | 1.54e-09 | 3 |
adipose tissue | 4.49e-08 | 14 |
atypical epithelium | 1.80e-07 | 4 |
jaw skeleton | 2.04e-07 | 4 |
splanchnocranium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.78e-26 | 1 |
meningioma | 2.78e-26 | 1 |
nervous system cancer | 2.35e-09 | 11 |