FFCP PHASE1:Hg19::chr20:55924311..55924317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:55924311..55924317,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr20:55924311..55924317,+ | |description=CAGE_peak_at_chr20:55924311..55924317,+ | ||
|id=chr20:55924311..55924317,+ | |id=chr20:55924311..55924317,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.30e-10!52;CL:0000542!1.15e-09!53;CL:0000051!1.15e-09!53;CL:0000988!1.88e-07!182;CL:0000037!5.07e-07!172;CL:0000566!5.07e-07!172 | |ontology_enrichment_celltype=CL:0000838!5.30e-10!52;CL:0000542!1.15e-09!53;CL:0000051!1.15e-09!53;CL:0000988!1.88e-07!182;CL:0000037!5.07e-07!172;CL:0000566!5.07e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.56e-07;1!CL:0000911;1.56e-07;1!CL:0000814;1.56e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.33e-07,1;CL:0000914,1.33e-07,1;CL:0000911,1.33e-07,1;CL:0000814,1.33e-07,1;CL:0002042,1.33e-07,1;CL:0002039,1.33e-07,1;CL:0002040,1.33e-07,1;CL:0002041,1.33e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.10e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.00e-30!235;DOID:14566!2.08e-29!239;DOID:0050687!3.80e-20!143;DOID:305!1.27e-17!106;DOID:0050686!5.86e-17!137;DOID:2531!1.20e-13!51;DOID:0060083!1.20e-13!51;DOID:0060058!1.18e-09!10;DOID:1240!2.98e-08!39;DOID:1749!8.34e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.66e-08;51!DOID:0060083;3.66e-08;51!DOID:1036;1.47e-07;8!DOID:6193;3.10e-07;1!DOID:5093;7.94e-07;4!DOID:1612;7.94e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.47e-10,137;DOID:2531,2.16e-10,51;DOID:0060083,2.16e-10,51;DOID:162,5.70e-09,235;DOID:14566,1.09e-08,239;DOID:1036,1.29e-07,8;DOID:6193,3.40e-07,1;DOID:1240,5.67e-07,39;DOID:5093,8.44e-07,4;DOID:1612,8.44e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.15e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.18e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,3.02122082263176,0.853015394924529,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0.590129310341499,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0.28853842595289,0.355709216742071,9.08729754554287,0,0.191505370132367,0,0,1.40398589056729,0,0,0,0.169291777801603,0,0,0.851692475380653,0.687010689511529,0,0,0,0,0,2.46174797895425,0,0.66614393599564,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.358042349351218,0,0,2.3948309234694,0,0,0,0,0.260427761085233,1.22443999994674,0,0.341380344856499,5.59358030644086,1.18193840883968,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,3.06579894587209,0,0.997270091400938,0.225595660617181,0,0.503464760927528,1.70778359451767,9.53619473882272,0,0.326465616318295,1.69623685720729,0.216388639742091,0,0,0,3.26173241548684,1.60633120630454,1.46190729307638,0,0,0,0.547364367646998,0.19566461893209,0.242780379534093,0,0,0,0,57.7241930551651,1.14057010536972,0,0,0.313932918407225,0,0,0,0,0.293977192243133,2.61177619741208,0,1.37588825977293,0.483781656445426,0.803982487948041,0.328461828212837,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0.288180834308212,0.343609788497747,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0.0984274815147488,0.76205998859206,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0.985110248992068,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0.395223263795889,1.33971858218986,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.428883182749851,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,1.13503190713367,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0.218419276384028,0.169732529954025,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,1.53360640352062,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0.236387681767936,5.22787588892725,0,0,0,0,0.431855182437243,0,0,0.632054446930906,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0.467878926924211,1.98950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,0.203977659483963,0.26721740526556,0,2.25636785363138,5.68340236636796,4.01946195234268,0,0,0,0,0,0.31037357147929,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0.813792356631477,0,0,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,3.02122082263176,0.853015394924529,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0.590129310341499,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0.28853842595289,0.355709216742071,9.08729754554287,0,0.191505370132367,0,0,1.40398589056729,0,0,0,0.169291777801603,0,0,0.851692475380653,0.687010689511529,0,0,0,0,0,2.46174797895425,0,0.66614393599564,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.358042349351218,0,0,2.3948309234694,0,0,0,0,0.260427761085233,1.22443999994674,0,0.341380344856499,5.59358030644086,1.18193840883968,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,3.06579894587209,0,0.997270091400938,0.225595660617181,0,0.503464760927528,1.70778359451767,9.53619473882272,0,0.326465616318295,1.69623685720729,0.216388639742091,0,0,0,3.26173241548684,1.60633120630454,1.46190729307638,0,0,0,0.547364367646998,0.19566461893209,0.242780379534093,0,0,0,0,57.7241930551651,1.14057010536972,0,0,0.313932918407225,0,0,0,0,0.293977192243133,2.61177619741208,0,1.37588825977293,0.483781656445426,0.803982487948041,0.328461828212837,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0.288180834308212,0.343609788497747,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0.0984274815147488,0.76205998859206,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0.985110248992068,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0.395223263795889,1.33971858218986,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.428883182749851,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,1.13503190713367,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0.218419276384028,0.169732529954025,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,1.53360640352062,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0.236387681767936,5.22787588892725,0,0,0,0,0.431855182437243,0,0,0.632054446930906,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0.467878926924211,1.98950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0,0.203977659483963,0.26721740526556,0,2.25636785363138,5.68340236636796,4.01946195234268,0,0,0,0,0,0.31037357147929,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0.813792356631477,0,0,0.320568492303233 | ||
|short_description=p@chr20:55924311..55924317,+ | |short_description=p@chr20:55924311..55924317,+ | ||
}} | }} |
Latest revision as of 15:41, 28 July 2015
Short description: | p@chr20:55924311..55924317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:55924311..55924317, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.33e-07 | 1 |
immature NK T cell | 1.33e-07 | 1 |
effector T cell | 1.33e-07 | 1 |
mature NK T cell | 1.33e-07 | 1 |
immature NK T cell stage IV | 1.33e-07 | 1 |
immature NK T cell stage I | 1.33e-07 | 1 |
immature NK T cell stage II | 1.33e-07 | 1 |
immature NK T cell stage III | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.18e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.47e-10 | 137 |
hematologic cancer | 2.16e-10 | 51 |
immune system cancer | 2.16e-10 | 51 |
cancer | 5.70e-09 | 235 |
disease of cellular proliferation | 1.09e-08 | 239 |
chronic leukemia | 1.29e-07 | 8 |
epithelioid sarcoma | 3.40e-07 | 1 |
leukemia | 5.67e-07 | 39 |
thoracic cancer | 8.44e-07 | 4 |
breast cancer | 8.44e-07 | 4 |