FFCP PHASE1:Hg19::chr21:10597500..10597509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_uc011abv.1_5end | |association_with_transcript=-58bp_to_uc011abv.1_5end | ||
|cluster_id=chr21:10597500..10597509,- | |||
|description=CAGE_peak_2_at_uc011abv.1_5end | |description=CAGE_peak_2_at_uc011abv.1_5end | ||
|id=chr21:10597500..10597509,- | |id=chr21:10597500..10597509,- | ||
|ontology_enrichment_celltype=CL:0000039!1.60e-27!7;CL:0000586!1.60e-27!7 | |ontology_enrichment_celltype=CL:0000039!1.60e-27!7;CL:0000586!1.60e-27!7 | ||
|ontology_enrichment_celltype_v019=CL:1000415;6.30e-26;2!CL:0000333;3.10e-11;5!CL:0000039;2.11e-08;7!CL:0000586;2.11e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.32e-26,2;CL:0000039,2.03e-08,7;CL:0000586,2.03e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.80e-21!22;DOID:2994!1.80e-21!22;DOID:1036!1.87e-15!8;DOID:162!4.20e-12!235;DOID:14566!9.02e-12!239;DOID:0060085!3.31e-09!1;DOID:3165!3.31e-09!1;DOID:0060121!3.31e-09!1;DOID:2438!3.31e-09!1;DOID:4418!3.31e-09!1;DOID:0050687!3.84e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22!DOID:169;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.74e-10,22;DOID:2994,4.74e-10,22;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.77e-16!8;UBERON:0003135!1.70e-11!11;UBERON:0001282!1.89e-09!1;UBERON:0009842!1.89e-09!1;UBERON:0003704!1.89e-09!1;UBERON:0001171!1.89e-09!1;UBERON:0001172!1.89e-09!1;UBERON:0000013!2.70e-07!5;UBERON:0002410!2.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.10e-50;1!UBERON:0009842;3.10e-50;1!UBERON:0003704;3.10e-50;1!UBERON:0001171;3.10e-50;1!UBERON:0001172;3.10e-50;1!UBERON:0002294;3.65e-29;7!UBERON:0001173;3.65e-29;7!UBERON:0002110;8.69e-18;3!UBERON:0001280;8.69e-18;3!UBERON:0004647;8.69e-18;3!UBERON:0002394;1.06e-13;4!UBERON:0003928;1.06e-13;4!UBERON:0000013;3.10e-11;5!UBERON:0002410;3.10e-11;5!UBERON:0002423;5.49e-09;25!UBERON:0000473;1.64e-07;8!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.99e-50,1;UBERON:0009842,3.99e-50,1;UBERON:0003704,3.99e-50,1;UBERON:0001171,3.99e-50,1;UBERON:0001172,3.99e-50,1;UBERON:0002294,5.13e-23,9;UBERON:0001173,5.13e-23,9;UBERON:0004912,5.13e-23,9;UBERON:0002110,6.76e-18,3;UBERON:0006242,6.76e-18,3;UBERON:0001280,9.46e-18,3;UBERON:0004647,9.46e-18,3;UBERON:0005171,9.46e-18,3;UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0002394,1.44e-09,6;UBERON:0003928,1.44e-09,6;UBERON:0009497,5.27e-09,25;UBERON:0000015,5.27e-09,25;UBERON:0002423,5.27e-09,25;UBERON:0006235,5.27e-09,25;UBERON:0004161,5.27e-09,25;UBERON:0000473,1.59e-07,8;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p2@uc011abv.1 | |short_description=p2@uc011abv.1 | ||
}} | }} |
Latest revision as of 16:40, 28 July 2015
Short description: | p2@uc011abv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc011abv.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_uc011abv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.32e-26 | 2 |
germ line cell | 2.03e-08 | 7 |
germ cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.99e-50 | 1 |
acinus | 3.99e-50 | 1 |
intrahepatic bile duct | 3.99e-50 | 1 |
portal lobule | 3.99e-50 | 1 |
hepatic acinus | 3.99e-50 | 1 |
biliary system | 5.13e-23 | 9 |
biliary tree | 5.13e-23 | 9 |
biliary bud | 5.13e-23 | 9 |
gallbladder | 6.76e-18 | 3 |
gall bladder primordium | 6.76e-18 | 3 |
liver parenchyma | 9.46e-18 | 3 |
liver lobule | 9.46e-18 | 3 |
hepatic duct | 9.46e-18 | 3 |
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
bile duct | 1.44e-09 | 6 |
digestive system duct | 1.44e-09 | 6 |
epithelium of foregut-midgut junction | 5.27e-09 | 25 |
anatomical boundary | 5.27e-09 | 25 |
hepatobiliary system | 5.27e-09 | 25 |
foregut-midgut junction | 5.27e-09 | 25 |
septum transversum | 5.27e-09 | 25 |
testis | 1.59e-07 | 8 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.74e-10 | 22 |
germ cell cancer | 4.74e-10 | 22 |
neuroendocrine tumor | 1.57e-09 | 6 |