FFCP PHASE1:Hg19::chr21:29774431..29774441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:29774431..29774441,- | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_at_chr21:29774431..29774441,- | |description=CAGE_peak_at_chr21:29774431..29774441,- | ||
|id=chr21:29774431..29774441,- | |id=chr21:29774431..29774441,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001282;5.12e-50;1!UBERON:0009842;5.12e-50;1!UBERON:0003704;5.12e-50;1!UBERON:0001171;5.12e-50;1!UBERON:0001172;5.12e-50;1!UBERON:0000007;8.10e-26;2!UBERON:0001280;1.03e-17;3!UBERON:0004647;1.03e-17;3!UBERON:0002394;1.21e-13;4!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0003928;1.21e-13;4!UBERON:0001894;2.26e-08;7!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |ontology_enrichment_development_v019=UBERON:0001041;1.15e-07;30 | ||
|ontology_enrichment_disease=DOID:3119!3.35e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000007!8.13e-28!2;UBERON:0001282!6.22e-15!1;UBERON:0009842!6.22e-15!1;UBERON:0003704!6.22e-15!1;UBERON:0001171!6.22e-15!1;UBERON:0001172!6.22e-15!1;UBERON:0003296!1.97e-14!4;UBERON:0010133!1.97e-14!4;UBERON:0001894!1.22e-08!7;UBERON:0006222!1.22e-08!7;UBERON:0001870!9.19e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.12e-50;1!UBERON:0009842;5.12e-50;1!UBERON:0003704;5.12e-50;1!UBERON:0001171;5.12e-50;1!UBERON:0001172;5.12e-50;1!UBERON:0000007;8.10e-26;2!UBERON:0001280;1.03e-17;3!UBERON:0004647;1.03e-17;3!UBERON:0002394;1.21e-13;4!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0003928;1.21e-13;4!UBERON:0001894;2.26e-08;7!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.99e-50,1;UBERON:0009842,3.99e-50,1;UBERON:0003704,3.99e-50,1;UBERON:0001171,3.99e-50,1;UBERON:0001172,3.99e-50,1;UBERON:0000007,9.18e-26,2;UBERON:0001280,9.46e-18,3;UBERON:0004647,9.46e-18,3;UBERON:0005171,9.46e-18,3;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002394,1.44e-09,6;UBERON:0003928,1.44e-09,6;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
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|short_description=p@chr21:29774431..29774441,- | |short_description=p@chr21:29774431..29774441,- | ||
}} | }} |
Latest revision as of 17:07, 28 July 2015
Short description: | p@chr21:29774431..29774441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:29774431..29774441, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.99e-50 | 1 |
acinus | 3.99e-50 | 1 |
intrahepatic bile duct | 3.99e-50 | 1 |
portal lobule | 3.99e-50 | 1 |
hepatic acinus | 3.99e-50 | 1 |
pituitary gland | 9.18e-26 | 2 |
liver parenchyma | 9.46e-18 | 3 |
liver lobule | 9.46e-18 | 3 |
hepatic duct | 9.46e-18 | 3 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
bile duct | 1.44e-09 | 6 |
digestive system duct | 1.44e-09 | 6 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |