FFCP PHASE1:Hg19::chr21:47283591..47283596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47283591..47283596,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr21:47283591..47283596,+ | |description=CAGE_peak_at_chr21:47283591..47283596,+ | ||
|id=chr21:47283591..47283596,+ | |id=chr21:47283591..47283596,+ | ||
|ontology_enrichment_celltype=CL:0002127!3.99e-50!1;CL:0000914!3.99e-50!1;CL:0000911!3.99e-50!1;CL:0000814!3.99e-50!1;CL:0002042!3.99e-50!1;CL:0002039!3.99e-50!1;CL:0002040!3.99e-50!1;CL:0002041!3.99e-50!1;CL:0000893!7.14e-26!2;CL:0002489!7.14e-26!2;CL:0000809!7.14e-26!2;CL:0000808!7.14e-26!2;CL:0000894!7.14e-26!2;CL:0000806!7.14e-26!2;CL:0000807!7.14e-26!2;CL:0000805!7.14e-26!2;CL:0002425!7.14e-26!2;CL:0000084!5.95e-09!25;CL:0000827!5.95e-09!25 | |ontology_enrichment_celltype=CL:0002127!3.99e-50!1;CL:0000914!3.99e-50!1;CL:0000911!3.99e-50!1;CL:0000814!3.99e-50!1;CL:0002042!3.99e-50!1;CL:0002039!3.99e-50!1;CL:0002040!3.99e-50!1;CL:0002041!3.99e-50!1;CL:0000893!7.14e-26!2;CL:0002489!7.14e-26!2;CL:0000809!7.14e-26!2;CL:0000808!7.14e-26!2;CL:0000894!7.14e-26!2;CL:0000806!7.14e-26!2;CL:0000807!7.14e-26!2;CL:0000805!7.14e-26!2;CL:0002425!7.14e-26!2;CL:0000084!5.95e-09!25;CL:0000827!5.95e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.34e-66;1!CL:0000911;3.34e-66;1!CL:0000814;3.34e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.66e-66,1;CL:0000914,4.66e-66,1;CL:0000911,4.66e-66,1;CL:0000814,4.66e-66,1;CL:0002042,4.66e-66,1;CL:0002039,4.66e-66,1;CL:0002040,4.66e-66,1;CL:0002041,4.66e-66,1;CL:0000893,7.05e-34,2;CL:0002489,7.05e-34,2;CL:0000809,7.05e-34,2;CL:0000808,7.05e-34,2;CL:0000894,7.05e-34,2;CL:0000806,7.05e-34,2;CL:0000807,7.05e-34,2;CL:0000805,7.05e-34,2;CL:0002425,7.05e-34,2 | |||
|ontology_enrichment_development_v019=CL:0002425;5.96e-34;2!UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.13e-13!4;UBERON:0005058!1.13e-13!4;UBERON:0009113!1.13e-13!4;UBERON:0003295!1.13e-13!4;UBERON:0005562!1.13e-13!4;UBERON:0000966!2.94e-11!5;UBERON:0005388!2.94e-11!5;UBERON:0001802!2.94e-11!5;UBERON:0000970!5.16e-11!20;UBERON:0002104!1.53e-10!21;UBERON:0000020!1.02e-09!23;UBERON:0003351!1.44e-09!6;UBERON:0001032!2.35e-09!24;UBERON:0004456!2.35e-09!24;UBERON:0004177!2.18e-08!7 | |ontology_enrichment_uberon=UBERON:0002370!1.13e-13!4;UBERON:0005058!1.13e-13!4;UBERON:0009113!1.13e-13!4;UBERON:0003295!1.13e-13!4;UBERON:0005562!1.13e-13!4;UBERON:0000966!2.94e-11!5;UBERON:0005388!2.94e-11!5;UBERON:0001802!2.94e-11!5;UBERON:0000970!5.16e-11!20;UBERON:0002104!1.53e-10!21;UBERON:0000020!1.02e-09!23;UBERON:0003351!1.44e-09!6;UBERON:0001032!2.35e-09!24;UBERON:0004456!2.35e-09!24;UBERON:0004177!2.18e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0000970;2.49e-14;20!UBERON:0002104;1.05e-13;21!UBERON:0000020;1.29e-12;23!UBERON:0001032;3.86e-12;24!UBERON:0004456;3.86e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0003351,2.74e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000974,6.56e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr21:47283591..47283596,+ | |short_description=p@chr21:47283591..47283596,+ | ||
}} | }} |
Latest revision as of 18:40, 28 July 2015
Short description: | p@chr21:47283591..47283596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47283591..47283596, + |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.66e-66 | 1 |
immature NK T cell | 4.66e-66 | 1 |
effector T cell | 4.66e-66 | 1 |
mature NK T cell | 4.66e-66 | 1 |
immature NK T cell stage IV | 4.66e-66 | 1 |
immature NK T cell stage I | 4.66e-66 | 1 |
immature NK T cell stage II | 4.66e-66 | 1 |
immature NK T cell stage III | 4.66e-66 | 1 |
thymocyte | 7.05e-34 | 2 |
double negative thymocyte | 7.05e-34 | 2 |
double-positive, alpha-beta thymocyte | 7.05e-34 | 2 |
DN4 thymocyte | 7.05e-34 | 2 |
DN1 thymic pro-T cell | 7.05e-34 | 2 |
DN2 thymocyte | 7.05e-34 | 2 |
DN3 thymocyte | 7.05e-34 | 2 |
immature single positive thymocyte | 7.05e-34 | 2 |
early T lineage precursor | 7.05e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
pharyngeal epithelium | 2.74e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
neck | 6.56e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |