FFCP PHASE1:Hg19::chr21:47408990..47409018,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:47408990..47409018,+ to FFCP PHASE1:Hg19::chr21:47408990..47409018,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47408990..47409018,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47408990..47409018,+ | |||
|id=chr21:47408990..47409018,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.95e-39!180;CL:0000057!1.40e-28!75;CL:0000183!2.94e-17!59;CL:0000680!2.31e-16!57;CL:0000056!2.31e-16!57;CL:0000355!2.31e-16!57;CL:0000187!2.33e-16!54;CL:0000393!2.26e-14!60;CL:0000211!2.26e-14!60;CL:0000192!6.22e-12!42;CL:0000514!6.22e-12!42;CL:0000048!1.20e-11!430;CL:0002620!8.90e-11!23;CL:0000723!9.90e-11!436;CL:0000034!3.93e-10!444;CL:0000359!8.84e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.25e-09;23!CL:0002559;7.08e-09;5!CL:0000057;1.40e-08;73!CL:0002320;3.02e-08;188!CL:0000723;3.02e-08;61!CL:0000134;2.61e-07;55!CL:0002570;3.37e-07;8!CL:0000048;5.36e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-20,76;CL:0000048,2.95e-16,427;CL:0000723,1.26e-15,433;CL:0000034,8.13e-15,441;CL:0002320,1.06e-12,361;CL:0000134,1.83e-09,354;CL:0002559,7.72e-09,5;CL:0002620,8.04e-09,23;CL:0000187,1.34e-08,55;CL:0000680,1.36e-08,58;CL:0000056,1.36e-08,58;CL:0000355,1.36e-08,58;CL:0002570,2.92e-07,8;CL:0000219,3.06e-07,386;CL:0000393,3.66e-07,61;CL:0000211,3.66e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.61e-07;5!DOID:450;3.61e-07;5!DOID:66;3.61e-07;5!DOID:423;3.61e-07;5!DOID:0080000;3.61e-07;5!DOID:11722;3.61e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.72e-07,5;DOID:450,3.72e-07,5;DOID:66,3.72e-07,5;DOID:423,3.72e-07,5;DOID:0080000,3.72e-07,5;DOID:11722,3.72e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.69e-23!83;UBERON:0002329!1.69e-23!83;UBERON:0003077!1.69e-23!83;UBERON:0003059!1.69e-23!83;UBERON:0007282!1.69e-23!83;UBERON:0009618!1.69e-23!83;UBERON:0007285!1.69e-23!83;UBERON:0004290!6.72e-21!70;UBERON:0000486!1.46e-17!82;UBERON:0002385!8.34e-17!63;UBERON:0001015!8.34e-17!63;UBERON:0000383!8.34e-17!63;UBERON:0001134!3.19e-16!61;UBERON:0002036!3.19e-16!61;UBERON:0003082!3.19e-16!61;UBERON:0005256!4.58e-16!143;UBERON:0000475!5.40e-14!365;UBERON:0002199!1.13e-12!45;UBERON:0002416!1.13e-12!45;UBERON:0003102!2.00e-12!95;UBERON:0000481!3.79e-11!347;UBERON:0002100!6.71e-11!216;UBERON:0002097!1.44e-09!40;UBERON:0003104!6.81e-08!238;UBERON:0009142!6.81e-08!238;UBERON:0007100!3.81e-07!27;UBERON:0000948!7.02e-07!24;UBERON:0005498!7.02e-07!24;UBERON:0004140!7.02e-07!24;UBERON:0009881!7.02e-07!24;UBERON:0004141!7.02e-07!24;UBERON:0003084!7.02e-07!24;UBERON:0007005!7.02e-07!24;UBERON:0004139!7.02e-07!24;UBERON:0004291!7.02e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.40e-09;46!UBERON:0002416;1.40e-09;46!UBERON:0002073;7.08e-09;5!UBERON:0002072;9.73e-09;5!UBERON:0003102;1.03e-08;50!UBERON:0002384;1.66e-08;198!UBERON:0001013;2.85e-08;14!UBERON:0011135;6.64e-08;5!UBERON:0002216;6.64e-08;5!UBERON:0011134;6.64e-08;5!UBERON:0002209;6.64e-08;5!UBERON:0002213;6.64e-08;5!UBERON:0007844;6.64e-08;5!UBERON:0011138;6.64e-08;5!UBERON:0001130;6.64e-08;5!UBERON:0001066;6.64e-08;5!UBERON:0001468;6.64e-08;5!UBERON:0002067;1.33e-07;9!UBERON:0002097;1.70e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.87e-14,46;UBERON:0002416,3.87e-14,46;UBERON:0007524,4.08e-14,73;UBERON:0002329,7.68e-14,71;UBERON:0003059,7.68e-14,71;UBERON:0007282,7.68e-14,71;UBERON:0004290,7.68e-14,71;UBERON:0009618,7.68e-14,71;UBERON:0003077,1.63e-13,72;UBERON:0007285,1.63e-13,72;UBERON:0002384,9.71e-13,371;UBERON:0003102,3.22e-12,99;UBERON:0007503,9.48e-12,78;UBERON:0000486,2.16e-11,83;UBERON:0003104,1.19e-10,160;UBERON:0009142,1.19e-10,160;UBERON:0005256,1.36e-10,122;UBERON:0002385,1.01e-09,64;UBERON:0001015,1.01e-09,64;UBERON:0000383,1.01e-09,64;UBERON:0002097,2.23e-09,41;UBERON:0001134,2.44e-09,62;UBERON:0002036,2.44e-09,62;UBERON:0003082,2.44e-09,62;UBERON:0002072,6.48e-09,5;UBERON:0002073,7.72e-09,5;UBERON:0005086,7.72e-09,5;UBERON:0001013,2.21e-08,14;UBERON:0011135,4.00e-08,5;UBERON:0002216,4.00e-08,5;UBERON:0011134,4.00e-08,5;UBERON:0002209,4.00e-08,5;UBERON:0002213,4.00e-08,5;UBERON:0005856,4.00e-08,5;UBERON:0005866,4.00e-08,5;UBERON:0005863,4.00e-08,5;UBERON:0007844,4.00e-08,5;UBERON:0011138,4.00e-08,5;UBERON:0001130,4.00e-08,5;UBERON:0001066,4.00e-08,5;UBERON:0001468,4.00e-08,5;UBERON:0002067,1.64e-07,9;UBERON:0004016,1.64e-07,9;UBERON:0010083,1.64e-07,9;UBERON:0004905,9.86e-07,8;UBERON:0000982,9.86e-07,8;UBERON:0004770,9.86e-07,8 | |||
|phase1_expression=0.181678379270557,2.14100523890983,1.40954404095971,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,2.52687949370732,5.22371256399677,0,0,0,0,2.35156070624089,4.97096063591874,0.672325146451775,3.61616716814386,3.65155045193687,3.41552959153355,0.369363174230364,1.22400414746552,0.940364164434263,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.01210257911091,0.255725123687061,1.80719576192283,1.00267582127178,4.05570253090306,0,2.43317435151318,0.283604451492204,0,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.926864265692532,1.72101972449288,0.354668382198357,1.12135520028461,1.06748995729705,0.74000264525148,0.311211035399766,0.538842688278752,0.163461903113459,2.27036141467397,4.60940739583999,0.70296429550139,1.5608003841516,0.570471821544449,3.43731965269142,1.29177948508141,1.29498355494505,0.702254033511242,0.408308342509787,3.0708579327942,1.96318984233954,4.75201142912821,1.97813543422845,1.82032272387605,5.03032699271367,0.336672227908132,1.00094815897571,0.831192346452549,0.877955241761676,2.45190236639216,2.55404700141215,0.226864366320042,1.79389635688862,1.49490172172997,2.11931901159562,2.40072876867522,1.13357782162283,0.772921620136887,0.744467425326359,1.68776332241266,0.779496041289589,1.51460264546469,1.01254888506529,2.42469085228218,2.13005755509969,0.604512589365842,0.847802961552438,0,0,0,0,0.265059536642971,0,0.310983165046111,0,0,6.25798129319264,12.8648187638577,1.38134921352481,5.10804720835177,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,7.3504355692771,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,4.15973914111831,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.514137463516618,0,0,0.448524337381443,0.87192013766656,0.36669142910475,0.129271715757778,0,4.22651376278,0.26593811658487,1.04007436911366,0.257207374262142,0,0.799266537048298,2.57360388584666,2.17048642156577,0.823240336780769,0.325736184293735,3.909311436168,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.71768088406796,1.50051156317903,4.88277042659524,1.87173775377726,1.78428988797162,0.630809660135739,0.702848489956279,1.20378439891088,4.5481500811197,0,1.32845119707087,1.65932251687533,1.39013783148933,1.95801157462741,3.43143423810856,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.12264037773229,0.896974044789907,1.02341449813341,0.482561763430822,0,2.62156479464514,5.14929003408069,0.9033987161519,1.55776328755086,3.1376802184189,0,0.200506470303285,0,0.114814448164607,2.1850940160806,2.75361271414791,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.457847324091717,0.41254749960294,0.574265537996172,0,0,0.870036464629098,0.924291702687866,1.5350367472613,1.10269257987624,1.6113036730241,1.88521702088497,0.93749290157711,1.4245125703478,0,0,0,0,0.464845549297286,2.20368642781448,0,0.308033580176089,0.532306030317022,0.869932992075073,1.8532421910392,0,0.744316738719335,0.316379424718726,2.47819252100972,1.02359116524534,0.42793898803392,1.59101623962968,1.56989728039846,0.539617372749944,1.37268514868027,0.824686816419805,0.808729926293264,1.58510321173008,0,0.975267478179181,0.974853958525138,0,1.50149902548784,1.55545975149084,0,0,0.66343897524122,1.31535265576129,1.15755106853338,4.59126326432643,0.608731130888112,0.92947049429925,1.12678241012897,0.143411352204052,0.785992328104969,0.35667105148125,0.709522128141196,1.89996871767898,0.987884678879706,0.379473173765715,2.79947776195986,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.552567831062295,0,0,0,0.933118762985422,0.0898683511473268,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0,0.627865836814451,0,0,0,0,0,0,0.698906672968121,0.343972064943233,0,0,0,0.581934098930517,0,1.35588444468319,0.274083849293502,0,0.0633107959558787,0,0,0.640358984218058,0.599428828746391,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,1.11712960508902,0.458320848023367,0.717873024576814,0.998395002494955,1.28767814440971,0,0.335917362433631,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.321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| ||
|short_description=p@chr21:47408990..47409018,+ | |||
}} | }} |
Latest revision as of 18:42, 28 July 2015
Short description: | p@chr21:47408990..47409018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47408990..47409018, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-20 | 76 |
multi fate stem cell | 2.95e-16 | 427 |
somatic stem cell | 1.26e-15 | 433 |
stem cell | 8.13e-15 | 441 |
connective tissue cell | 1.06e-12 | 361 |
mesenchymal cell | 1.83e-09 | 354 |
hair follicle cell | 7.72e-09 | 5 |
skin fibroblast | 8.04e-09 | 23 |
muscle cell | 1.34e-08 | 55 |
muscle precursor cell | 1.36e-08 | 58 |
myoblast | 1.36e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-08 | 58 |
mesenchymal stem cell of adipose | 2.92e-07 | 8 |
motile cell | 3.06e-07 | 386 |
electrically responsive cell | 3.66e-07 | 61 |
electrically active cell | 3.66e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.72e-07 | 5 |
myotonic disease | 3.72e-07 | 5 |
muscle tissue disease | 3.72e-07 | 5 |
myopathy | 3.72e-07 | 5 |
muscular disease | 3.72e-07 | 5 |
myotonic dystrophy | 3.72e-07 | 5 |