FFCP PHASE1:Hg19::chr21:47424397..47424408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47424397..47424408,+ | |||
|description=CAGE_peak_at_chr21:47424397..47424408,+ | |description=CAGE_peak_at_chr21:47424397..47424408,+ | ||
|id=chr21:47424397..47424408,+ | |id=chr21:47424397..47424408,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.95e-30!180;CL:0000057!9.81e-28!75;CL:0002620!9.72e-12!23;CL:0000048!6.78e-10!430;CL:0000034!1.95e-09!444;CL:0000723!2.88e-09!436;CL:0000183!1.89e-08!59;CL:0000187!3.41e-08!54;CL:0000680!5.00e-08!57;CL:0000056!5.00e-08!57;CL:0000355!5.00e-08!57;CL:0000393!6.72e-08!60;CL:0000211!6.72e-08!60;CL:0002334!1.68e-07!12;CL:0000136!3.11e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.95e-30!180;CL:0000057!9.81e-28!75;CL:0002620!9.72e-12!23;CL:0000048!6.78e-10!430;CL:0000034!1.95e-09!444;CL:0000723!2.88e-09!436;CL:0000183!1.89e-08!59;CL:0000187!3.41e-08!54;CL:0000680!5.00e-08!57;CL:0000056!5.00e-08!57;CL:0000355!5.00e-08!57;CL:0000393!6.72e-08!60;CL:0000211!6.72e-08!60;CL:0002334!1.68e-07!12;CL:0000136!3.11e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.41e-12;3!CL:0002582;1.14e-11;3!CL:0000632;1.73e-11;3!CL:0002620;8.05e-09;23!CL:0002575;2.46e-08;2!CL:0000057;2.15e-07;73!CL:0000499;3.77e-07;28!CL:0000136;4.98e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.31e-17,76;CL:0002521,1.34e-12,3;CL:0000048,1.93e-12,427;CL:0000723,4.09e-12,433;CL:0000034,1.08e-11,441;CL:0000632,1.26e-11,3;CL:0002582,1.51e-11,3;CL:0000136,2.30e-11,15;CL:0002320,1.12e-09,361;CL:0002620,9.32e-09,23;CL:0000134,1.30e-08,354;CL:0002575,3.90e-08,2;CL:0000499,2.79e-07,28;CL:0000219,4.78e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.66e-07;5!DOID:450;4.66e-07;5!DOID:66;4.66e-07;5!DOID:423;4.66e-07;5!DOID:0080000;4.66e-07;5!DOID:11722;4.66e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.49e-07,5;DOID:450,4.49e-07,5;DOID:66,4.49e-07,5;DOID:423,4.49e-07,5;DOID:0080000,4.49e-07,5;DOID:11722,4.49e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.76e-10!95;UBERON:0000914!4.46e-10!83;UBERON:0002329!4.46e-10!83;UBERON:0003077!4.46e-10!83;UBERON:0003059!4.46e-10!83;UBERON:0007282!4.46e-10!83;UBERON:0009618!4.46e-10!83;UBERON:0007285!4.46e-10!83;UBERON:0002199!4.89e-09!45;UBERON:0002416!4.89e-09!45;UBERON:0004290!9.39e-09!70;UBERON:0005256!7.44e-08!143;UBERON:0002385!1.60e-07!63;UBERON:0001015!1.60e-07!63;UBERON:0000383!1.60e-07!63;UBERON:0001134!1.89e-07!61;UBERON:0002036!1.89e-07!61;UBERON:0003082!1.89e-07!61;UBERON:0002384!4.03e-07!375;UBERON:0002072!9.67e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;5.21e-13;5!UBERON:0002190;1.41e-12;3!UBERON:0001013;2.34e-09;14!UBERON:0002199;4.04e-08;46!UBERON:0002416;4.04e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,5.26e-13,5;UBERON:0002190,1.34e-12,3;UBERON:0002199,1.16e-10,46;UBERON:0002416,1.16e-10,46;UBERON:0002384,7.37e-10,371;UBERON:0001013,2.04e-09,14;UBERON:0003102,1.07e-08,99 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,1.78784437770915,0,2.53299878168311,5.68547886084148,3.13422753839806,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,4.69870898099936,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,3.15520282823695,0.709336764396714,0,0,1.48000529050296,0.311211035399766,0.269421344139376,0,0.756787138224657,0,0,2.49728061464256,0,1.64393548606981,0.23486899728753,0.323745888736263,0,0.61246251376468,0.491337269247072,0.103325781175765,3.56400857184616,1.23633464639278,0.910161361938026,1.43723628363248,0.168336113954066,0,0.831192346452549,0,0.612975591598039,0.45071417671979,0.113432183160021,1.25572744982203,0.85422955527427,1.48352330811693,2.40072876867522,0.824420233907511,1.03056216018252,0.37223371266318,0.337552664482532,0.389748020644795,0,0.460249493211497,2.42469085228218,1.06502877754984,0.302256294682921,0.508681776931463,0,0,0,0.243947412259191,0.132529768321485,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.448524337381443,0,0.22001485746285,0.258543431515556,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0,0.285955987316295,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,1.03985430765404,0.892144943985809,0,0.234282829985426,0,4.5481500811197,5.17365356462525,0,0.184369168541703,1.65078867489357,2.74121620447837,1.02943027143257,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0.280660094433074,0.768834895534206,0,0.482561763430822,0,0.616838775210622,4.26148140751505,1.39616165223476,4.67328986265259,1.04589340613963,0,0.40101294060657,0,0,0.546273504020151,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,5.02687735119034,0,0.15350367472613,0.137836572484531,0.751941714077915,0.145016693914229,0.170453254832202,2.40386496246191,0,0,0,0,0.464845549297286,2.51849877464512,0.6970372701606,0,0,0,0.9266210955196,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,1.27281299170375,0,0.359744915166629,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.682499557039929,1.55545975149084,0,0,0,1.31535265576129,1.73632660280006,0.655894752046633,0,0,0.563391205064483,0,0,0,0,1.89996871767898,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.19924798825107,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0.160753148465019,0,1.66176135211674,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.74627401443437,0.467426619694449,0.554805861502613,0.568209015825267,0.754703705257725,0.889811221596536,0.228840068396924,0.604923695052956,0.310874401165561,0,0,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0,0.727394636810238,0.214821114084977,0,0.398095888698616,0,2.74716564146234,1.34699795506368,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0.60511520611056,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr21:47424397..47424408,+ | |short_description=p@chr21:47424397..47424408,+ | ||
}} | }} |
Latest revision as of 18:44, 28 July 2015
Short description: | p@chr21:47424397..47424408, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47424397..47424408, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.31e-17 | 76 |
subcutaneous fat cell | 1.34e-12 | 3 |
multi fate stem cell | 1.93e-12 | 427 |
somatic stem cell | 4.09e-12 | 433 |
stem cell | 1.08e-11 | 441 |
hepatic stellate cell | 1.26e-11 | 3 |
visceral preadipocyte | 1.51e-11 | 3 |
fat cell | 2.30e-11 | 15 |
connective tissue cell | 1.12e-09 | 361 |
skin fibroblast | 9.32e-09 | 23 |
mesenchymal cell | 1.30e-08 | 354 |
central nervous system pericyte | 3.90e-08 | 2 |
stromal cell | 2.79e-07 | 28 |
motile cell | 4.78e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 5.26e-13 | 5 |
subcutaneous adipose tissue | 1.34e-12 | 3 |
integument | 1.16e-10 | 46 |
integumental system | 1.16e-10 | 46 |
connective tissue | 7.37e-10 | 371 |
adipose tissue | 2.04e-09 | 14 |
surface structure | 1.07e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.49e-07 | 5 |
myotonic disease | 4.49e-07 | 5 |
muscle tissue disease | 4.49e-07 | 5 |
myopathy | 4.49e-07 | 5 |
muscular disease | 4.49e-07 | 5 |
myotonic dystrophy | 4.49e-07 | 5 |