FFCP PHASE1:Hg19::chr21:47424790..47424801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:47424790..47424801,+ | |||
|description=CAGE_peak_at_chr21:47424790..47424801,+ | |||
|id=chr21:47424790..47424801,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.49e-28!180;CL:0000057!1.25e-18!75;CL:0002620!5.55e-12!23;CL:0000393!8.20e-12!60;CL:0000211!8.20e-12!60;CL:0000680!1.77e-11!57;CL:0000056!1.77e-11!57;CL:0000355!1.77e-11!57;CL:0000187!2.51e-10!54;CL:0000183!2.98e-10!59;CL:0000048!1.97e-08!430;CL:0000723!9.17e-08!436;CL:0002570!2.25e-07!8;CL:0000034!2.31e-07!444;CL:0000192!3.36e-07!42;CL:0000514!3.36e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.60e-15;23!CL:0002570;5.71e-11;8!CL:0000499;8.17e-08;28!CL:0000135;1.46e-07;3!CL:0002521;1.46e-07;3!CL:0000388;1.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.92e-15,23;CL:0000057,7.02e-14,76;CL:0002570,5.70e-11,8;CL:0002320,5.22e-09,361;CL:0000048,1.62e-08,427;CL:0000723,3.48e-08,433;CL:0000135,7.33e-08,3;CL:0000388,7.33e-08,3;CL:0000034,9.28e-08,441;CL:0000499,9.42e-08,28;CL:0002521,2.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.10e-08;5!DOID:450;1.10e-08;5!DOID:66;1.10e-08;5!DOID:423;1.10e-08;5!DOID:0080000;1.10e-08;5!DOID:11722;1.10e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.25e-08,5;DOID:450,1.25e-08,5;DOID:66,1.25e-08,5;DOID:423,1.25e-08,5;DOID:0080000,1.25e-08,5;DOID:11722,1.25e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!7.49e-15!70;UBERON:0000914!6.94e-14!83;UBERON:0002329!6.94e-14!83;UBERON:0003077!6.94e-14!83;UBERON:0003059!6.94e-14!83;UBERON:0007282!6.94e-14!83;UBERON:0009618!6.94e-14!83;UBERON:0007285!6.94e-14!83;UBERON:0000486!1.91e-12!82;UBERON:0002199!4.54e-12!45;UBERON:0002416!4.54e-12!45;UBERON:0002385!1.26e-11!63;UBERON:0001015!1.26e-11!63;UBERON:0000383!1.26e-11!63;UBERON:0001134!1.31e-11!61;UBERON:0002036!1.31e-11!61;UBERON:0003082!1.31e-11!61;UBERON:0002097!4.18e-09!40;UBERON:0003102!2.12e-08!95;UBERON:0000475!7.63e-08!365;UBERON:0005256!1.14e-07!143;UBERON:0001013!1.37e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.31e-15;46!UBERON:0002416;1.31e-15;46!UBERON:0001013;1.17e-12;14!UBERON:0002097;5.53e-12;41!UBERON:0002072;2.96e-11;5!UBERON:0003102;3.58e-11;50!UBERON:0007846;1.46e-07;3!UBERON:0000043;1.46e-07;3!UBERON:0007845;1.46e-07;3!UBERON:0002190;1.46e-07;3!UBERON:0011135;1.59e-07;5!UBERON:0002216;1.59e-07;5!UBERON:0011134;1.59e-07;5!UBERON:0002209;1.59e-07;5!UBERON:0002213;1.59e-07;5!UBERON:0007844;1.59e-07;5!UBERON:0011138;1.59e-07;5!UBERON:0001130;1.59e-07;5!UBERON:0001066;1.59e-07;5!UBERON:0001468;1.59e-07;5!UBERON:0004905;6.78e-07;8!UBERON:0000982;6.78e-07;8!UBERON:0004770;6.78e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.23e-21,46;UBERON:0002416,1.23e-21,46;UBERON:0002097,7.00e-15,41;UBERON:0001013,1.48e-12,14;UBERON:0003102,1.97e-12,99;UBERON:0002072,3.93e-11,5;UBERON:0002384,6.14e-09,371;UBERON:0007846,7.33e-08,3;UBERON:0000043,7.33e-08,3;UBERON:0007845,7.33e-08,3;UBERON:0002190,2.13e-07,3;UBERON:0011135,2.67e-07,5;UBERON:0002216,2.67e-07,5;UBERON:0011134,2.67e-07,5;UBERON:0002209,2.67e-07,5;UBERON:0002213,2.67e-07,5;UBERON:0005856,2.67e-07,5;UBERON:0005866,2.67e-07,5;UBERON:0005863,2.67e-07,5;UBERON:0007844,2.67e-07,5;UBERON:0011138,2.67e-07,5;UBERON:0001130,2.67e-07,5;UBERON:0001066,2.67e-07,5;UBERON:0001468,2.67e-07,5 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.140954404095971,0,0.893922188854576,0,2.53299878168311,1.26343974685366,1.04474251279935,0,0,0,0,1.23766352960047,1.32558950291166,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,2.1686349143074,1.50401373190767,2.02785126545153,0.795285947051099,0.973269740605272,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0.397227542439656,4.30254931123221,0,1.12135520028461,3.20246987189115,0.24666754841716,0,0.269421344139376,0.326923806226917,1.51357427644931,0.576175924479999,0,2.18512053781224,0.570471821544449,1.64393548606981,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0.368502951935304,0.309977343527296,2.37600571456411,0.247266929278557,0.910161361938026,0.718618141816238,0.841680569770331,0,0,0,0,0.150238058906597,0.113432183160021,3.7671823494661,2.34913127700424,2.11931901159562,4.50136644126603,0.515262646192195,2.31876486041066,1.11670113798954,1.0126579934476,0.194874010322397,2.52433774244115,2.11714766877288,0.80823028409406,5.32514388774922,0.201504196455281,1.01736355386293,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,4.69348596989448,7.71889125831462,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.1466765716419,0.904902010304444,7.15312891703765,6.762422020448,0,0,0,0,0.532844358032199,0.57191197463259,2.71310802695722,0,0.325736184293735,1.42156779497018,0.791951872933429,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,1.44781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,2.08575535922538,0.500170521059677,1.08506009479894,2.07970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0.553107505625109,2.34585759063824,1.95801157462741,1.71571711905428,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0.280660094433074,1.15325234330131,0.511707249066704,0.321707842287215,0,1.07946785661859,1.9531789784444,0.98552587216571,0.519254429183621,0.929683027679674,0,0,0,1.49258782613989,2.1850940160806,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.96670718292122,0.462145851343933,0.614014698904518,0.275673144969061,0.537101224341368,0.725083469571143,0.426133137080504,1.60257664164127,0,0,0,0,0.464845549297286,8.18512101759664,0,0.308033580176089,0.532306030317022,0.869932992075073,1.8532421910392,0,1.86079184679834,0,0.190630193923825,0.511795582622668,0.855877976067841,1.59101623962968,0,0.899362287916574,0.54907405947211,0.706874414074119,0.606547444719948,0,0.421258456238981,0,1.46228093778771,0,0.682499557039929,1.1312434556297,1.13008116620243,2.2054613741845,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.392996164052485,0,0.354761064070598,1.05553817648832,0.658589785919804,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0,0,0.844501632511974,0.19924798825107,0.276283915531148,0,0.102268682502155,0,2.79935628895627,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0.663475559587348,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.52418000472609,0.859930162358083,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,0.851940108927109,0.113312091520126,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0.285465333544967,0.235265819698172,0,0,1.64180283175561,0.701139929541673,1.10961172300523,0.568209015825267,0.50313580350515,2.66943366478961,0,0.907385542579434,0.310874401165561,0.443565449968902,0.477890301491107,0,0.776314784381297,0.414706207840855,1.06336685823198,1.5652351854352,0.901545653983311,0,0,0.181848659202559,0.75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| |||
|short_description=p@chr21:47424790..47424801,+ | |||
}} |
Latest revision as of 18:45, 28 July 2015
Short description: | p@chr21:47424790..47424801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47424790..47424801, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.92e-15 | 23 |
fibroblast | 7.02e-14 | 76 |
mesenchymal stem cell of adipose | 5.70e-11 | 8 |
connective tissue cell | 5.22e-09 | 361 |
multi fate stem cell | 1.62e-08 | 427 |
somatic stem cell | 3.48e-08 | 433 |
fibrocyte | 7.33e-08 | 3 |
tendon cell | 7.33e-08 | 3 |
stem cell | 9.28e-08 | 441 |
stromal cell | 9.42e-08 | 28 |
subcutaneous fat cell | 2.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.23e-21 | 46 |
integumental system | 1.23e-21 | 46 |
skin of body | 7.00e-15 | 41 |
adipose tissue | 1.48e-12 | 14 |
surface structure | 1.97e-12 | 99 |
hypodermis | 3.93e-11 | 5 |
connective tissue | 6.14e-09 | 371 |
dense regular connective tissue | 7.33e-08 | 3 |
tendon | 7.33e-08 | 3 |
regular connective tissue | 7.33e-08 | 3 |
subcutaneous adipose tissue | 2.13e-07 | 3 |
intervertebral cartilage | 2.67e-07 | 5 |
symphysis | 2.67e-07 | 5 |
nonsynovial joint | 2.67e-07 | 5 |
fibrous joint | 2.67e-07 | 5 |
cartilaginous joint | 2.67e-07 | 5 |
developing mesenchymal condensation | 2.67e-07 | 5 |
pre-cartilage condensation | 2.67e-07 | 5 |
cartilaginous condensation | 2.67e-07 | 5 |
cartilage element | 2.67e-07 | 5 |
post-cranial axial skeletal system | 2.67e-07 | 5 |
vertebral column | 2.67e-07 | 5 |
intervertebral disk | 2.67e-07 | 5 |
intervertebral joint | 2.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.25e-08 | 5 |
myotonic disease | 1.25e-08 | 5 |
muscle tissue disease | 1.25e-08 | 5 |
myopathy | 1.25e-08 | 5 |
muscular disease | 1.25e-08 | 5 |
myotonic dystrophy | 1.25e-08 | 5 |