FFCP PHASE1:Hg19::chr21:47519826..47519829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47519826..47519829,+ | |||
|description=CAGE_peak_at_chr21:47519826..47519829,+ | |description=CAGE_peak_at_chr21:47519826..47519829,+ | ||
|id=chr21:47519826..47519829,+ | |id=chr21:47519826..47519829,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.66e-32!180;CL:0000057!7.00e-21!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.40e-16!54;CL:0000183!5.76e-15!59;CL:0000393!1.41e-13!60;CL:0000211!1.41e-13!60;CL:0002620!1.32e-11!23;CL:0000048!2.10e-11!430;CL:0000192!4.55e-11!42;CL:0000514!4.55e-11!42;CL:0000723!1.81e-10!436;CL:0000034!5.45e-10!444;CL:0000359!2.41e-08!32 | |ontology_enrichment_celltype=CL:0000055!2.66e-32!180;CL:0000057!7.00e-21!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.40e-16!54;CL:0000183!5.76e-15!59;CL:0000393!1.41e-13!60;CL:0000211!1.41e-13!60;CL:0002620!1.32e-11!23;CL:0000048!2.10e-11!430;CL:0000192!4.55e-11!42;CL:0000514!4.55e-11!42;CL:0000723!1.81e-10!436;CL:0000034!5.45e-10!444;CL:0000359!2.41e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.91e-19;23!CL:0000057;2.19e-10;73!CL:0000188;1.31e-09;9!CL:0000723;1.53e-09;61!CL:0000134;2.95e-09;55!CL:0002570;3.99e-09;8!CL:0000499;8.26e-08;28!CL:0000048;1.65e-07;58!CL:0000034;2.68e-07;69!CL:0002320;8.20e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-27,76;CL:0002620,1.80e-19,23;CL:0000048,1.43e-18,427;CL:0000723,7.58e-18,433;CL:0000034,6.47e-17,441;CL:0000134,2.29e-11,354;CL:0002320,1.14e-10,361;CL:0000188,6.35e-10,9;CL:0000187,2.33e-09,55;CL:0002570,4.57e-09,8;CL:0000680,1.64e-08,58;CL:0000056,1.64e-08,58;CL:0000355,1.64e-08,58;CL:0000219,2.80e-08,386;CL:0000499,3.58e-08,28;CL:0000393,9.30e-08,61;CL:0000211,9.30e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.66e-08!14 | |ontology_enrichment_disease=DOID:2394!2.66e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.23e-12;14!DOID:17;3.06e-07;5!DOID:450;3.06e-07;5!DOID:66;3.06e-07;5!DOID:423;3.06e-07;5!DOID:0080000;3.06e-07;5!DOID:11722;3.06e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-12,14;DOID:17,4.01e-07,5;DOID:450,4.01e-07,5;DOID:66,4.01e-07,5;DOID:423,4.01e-07,5;DOID:0080000,4.01e-07,5;DOID:11722,4.01e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.89e-19!83;UBERON:0002329!2.89e-19!83;UBERON:0003077!2.89e-19!83;UBERON:0003059!2.89e-19!83;UBERON:0007282!2.89e-19!83;UBERON:0009618!2.89e-19!83;UBERON:0007285!2.89e-19!83;UBERON:0004290!3.67e-18!70;UBERON:0002385!5.73e-17!63;UBERON:0001015!5.73e-17!63;UBERON:0000383!5.73e-17!63;UBERON:0001134!3.82e-16!61;UBERON:0002036!3.82e-16!61;UBERON:0003082!3.82e-16!61;UBERON:0000486!1.86e-14!82;UBERON:0005256!1.01e-11!143;UBERON:0003102!4.80e-11!95;UBERON:0002199!7.80e-09!45;UBERON:0002416!7.80e-09!45;UBERON:0002100!2.37e-08!216;UBERON:0002097!1.87e-07!40;UBERON:0001135!2.87e-07!15;UBERON:0003104!9.26e-07!238;UBERON:0009142!9.26e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;7.08e-12;46!UBERON:0002416;7.08e-12;46!UBERON:0002097;4.22e-11;41!UBERON:0003102;2.76e-10;50!UBERON:0002385;3.01e-10;31!UBERON:0001015;3.01e-10;31!UBERON:0000383;3.01e-10;31!UBERON:0001013;9.71e-09;14!UBERON:0002118;3.10e-08;5!UBERON:0002384;1.88e-07;198!UBERON:0002204;4.39e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.60e-18,99;UBERON:0002199,1.90e-17,46;UBERON:0002416,1.90e-17,46;UBERON:0002097,1.43e-14,41;UBERON:0007524,3.49e-12,73;UBERON:0002329,1.06e-11,71;UBERON:0003059,1.06e-11,71;UBERON:0007282,1.06e-11,71;UBERON:0004290,1.06e-11,71;UBERON:0009618,1.06e-11,71;UBERON:0003077,2.09e-11,72;UBERON:0007285,2.09e-11,72;UBERON:0002384,3.84e-11,371;UBERON:0000486,3.14e-10,83;UBERON:0007503,8.14e-10,78;UBERON:0005256,7.65e-09,122;UBERON:0001013,8.36e-09,14;UBERON:0002385,1.42e-08,64;UBERON:0001015,1.42e-08,64;UBERON:0000383,1.42e-08,64;UBERON:0001134,3.21e-08,62;UBERON:0002036,3.21e-08,62;UBERON:0003082,3.21e-08,62;UBERON:0002118,4.34e-08,5;UBERON:0003104,7.60e-07,160;UBERON:0009142,7.60e-07,160 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.893922188854576,0.872338524100369,0,3.79031924056099,1.82829939739887,0,0,0,0,0,0,4.70627602516243,4.21886169616784,5.84248072309899,2.43966399395253,0.984968464614303,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00272223735071,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0.821127996921047,0.201606743224732,2.40696176205157,0.289648807765598,4.87613732627923,0.670700859703636,0.383587685530591,4.3372698286148,1.50401373190767,1.59331170856906,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,11.2547803691236,2.86836620748814,1.41867352879343,0,0,0.98667019366864,0.622422070799533,0.269421344139376,0.980771418680752,1.05950199351452,1.15235184896,0.234321431833797,8.74048215124897,0,3.58676833324323,3.75790395660048,3.39933183173076,6.60118791500568,2.04154171254893,8.47556789451199,1.03325781175765,0,1.97813543422845,0,0,3.53505839303539,5.00474079487857,0.554128230968366,0.877955241761676,1.22595118319608,1.50238058906597,0,4.12596162084383,1.2813443329114,4.87443372666992,2.10063767259082,3.40073346486848,3.09168648054755,1.8611685633159,12.9957775825775,1.94874010322397,2.01947019395292,2.30124746605748,0.161646056818812,2.13005755509969,1.30977727695932,1.18692414617341,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,4.5026865673502,0,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,2.28065813717227,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0.380987365753014,0,0,0,0.925447434329912,0,0,1.90622843387113,0,1.6134422880609,1.55126058909333,0,7.607724773004,0.531876233169741,0,1.02882949704857,0,1.8649552531127,0,0,0.823240336780769,11.7265026345745,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0.197030760201927,5.82194452120697,1.02674429023799,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,2.28767947683888,0.713715955188647,0.473107245101804,0.585707074963566,0.300946099727719,0,0,5.31380478828349,0.737476674166813,2.25897397617015,0.391602314925481,0.686286847621712,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.512556597022804,1.02341449813341,1.28683136914886,0,1.23367755042124,4.43904313282818,6.07740954502188,2.59627214591811,5.22946703069817,0.120859449591622,0,0,1.95184561879831,1.0925470080403,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0.457847324091717,0.165018999841176,0,0.650060246036521,0,4.93020663289822,2.92692372517824,1.84204409671355,2.75673144969061,8.48619934459362,4.20548412351263,4.77269113530165,3.56128142586949,0,0,0,0,0.929691098594572,2.83331112147576,1.3940745403212,0.308033580176089,0,0.869932992075073,0.9266210955196,0.715624433709956,0.744316738719335,1.2655176988749,1.5250415513906,0,0,0.318203247925937,1.56989728039846,2.15846949099978,0.54907405947211,2.00281083987667,0.202182481573316,0,0.421258456238981,0.975267478179181,0.487426979262569,1.05650146756755,0.545999645631943,3.39373036688911,1.13008116620243,0,0.66343897524122,1.31535265576129,1.15755106853338,1.31178950409327,0.202910376962704,0.6196469961995,0,0.860468113224309,0.491245205065606,0.35667105148125,0.354761064070598,2.32218398827431,1.97576935775941,0.379473173765715,1.39973888097993,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.31857361344705,0,0,0,1.67121139316383,0,0,0,0,0,0,0.422250816255987,3.38721580026819,1.65770349318689,0,0,0,3.11039587661807,0.179736702294654,0,0,0.986434056369336,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0.236387681767936,1.03423011972439,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.265372693510018,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0.485560759068186,0.394584402849391,1.20990716048664,0,2.02197054811161,0,0,0,0,1.2557316736289,2.38944859545918,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0.687944129886466,0,0,0,0.678923115418936,0.176512253383001,0,0.137041924646751,0.397429223405979,0.0633107959558787,0.195551382734803,0.320635281006135,2.98834192635094,0.19980960958213,0.288180834308212,0,0,0,0.248505071130865,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0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| ||
|short_description=p@chr21:47519826..47519829,+ | |short_description=p@chr21:47519826..47519829,+ | ||
}} | }} |
Latest revision as of 18:46, 28 July 2015
Short description: | p@chr21:47519826..47519829, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47519826..47519829, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.85e-27 | 76 |
skin fibroblast | 1.80e-19 | 23 |
multi fate stem cell | 1.43e-18 | 427 |
somatic stem cell | 7.58e-18 | 433 |
stem cell | 6.47e-17 | 441 |
mesenchymal cell | 2.29e-11 | 354 |
connective tissue cell | 1.14e-10 | 361 |
cell of skeletal muscle | 6.35e-10 | 9 |
muscle cell | 2.33e-09 | 55 |
mesenchymal stem cell of adipose | 4.57e-09 | 8 |
muscle precursor cell | 1.64e-08 | 58 |
myoblast | 1.64e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-08 | 58 |
motile cell | 2.80e-08 | 386 |
stromal cell | 3.58e-08 | 28 |
electrically responsive cell | 9.30e-08 | 61 |
electrically active cell | 9.30e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.60e-18 | 99 |
integument | 1.90e-17 | 46 |
integumental system | 1.90e-17 | 46 |
skin of body | 1.43e-14 | 41 |
dense mesenchyme tissue | 3.49e-12 | 73 |
somite | 1.06e-11 | 71 |
presomitic mesoderm | 1.06e-11 | 71 |
presumptive segmental plate | 1.06e-11 | 71 |
dermomyotome | 1.06e-11 | 71 |
trunk paraxial mesoderm | 1.06e-11 | 71 |
paraxial mesoderm | 2.09e-11 | 72 |
presumptive paraxial mesoderm | 2.09e-11 | 72 |
connective tissue | 3.84e-11 | 371 |
multilaminar epithelium | 3.14e-10 | 83 |
epithelial vesicle | 8.14e-10 | 78 |
trunk mesenchyme | 7.65e-09 | 122 |
adipose tissue | 8.36e-09 | 14 |
muscle tissue | 1.42e-08 | 64 |
musculature | 1.42e-08 | 64 |
musculature of body | 1.42e-08 | 64 |
skeletal muscle tissue | 3.21e-08 | 62 |
striated muscle tissue | 3.21e-08 | 62 |
myotome | 3.21e-08 | 62 |
right ovary | 4.34e-08 | 5 |
mesenchyme | 7.60e-07 | 160 |
entire embryonic mesenchyme | 7.60e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-12 | 14 |
musculoskeletal system disease | 4.01e-07 | 5 |
myotonic disease | 4.01e-07 | 5 |
muscle tissue disease | 4.01e-07 | 5 |
myopathy | 4.01e-07 | 5 |
muscular disease | 4.01e-07 | 5 |
myotonic dystrophy | 4.01e-07 | 5 |