FFCP PHASE1:Hg19::chr22:26346329..26346352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:26346329..26346352,+ | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_at_chr22:26346329..26346352,+ | |description=CAGE_peak_at_chr22:26346329..26346352,+ | ||
|id=chr22:26346329..26346352,+ | |id=chr22:26346329..26346352,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.17e-12!24;CL:0000826!6.17e-12!24;CL:0000838!3.94e-08!52;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000946!4.34e-07!1;CL:0000786!4.34e-07!1;CL:0000980!4.34e-07!1 | |ontology_enrichment_celltype=CL:0000945!6.17e-12!24;CL:0000826!6.17e-12!24;CL:0000838!3.94e-08!52;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000946!4.34e-07!1;CL:0000786!4.34e-07!1;CL:0000980!4.34e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
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|ontology_enrichment_disease_v019=DOID:630;1.84e-34;1!DOID:0050177;1.84e-34;1!DOID:0050427;1.84e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-66;2!UBERON:0005058;2.03e-66;2!UBERON:0009113;2.03e-66;2!UBERON:0004177;1.10e-59;5!UBERON:0005057;1.10e-59;5!UBERON:0002106;2.31e-12;3!UBERON:0000077;8.62e-12;27!UBERON:0002405;8.62e-12;27!UBERON:0002390;4.98e-08;32 | |||
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|short_description=p@chr22:26346329..26346352,+ | |short_description=p@chr22:26346329..26346352,+ | ||
}} | }} |
Latest revision as of 19:45, 28 July 2015
Short description: | p@chr22:26346329..26346352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:26346329..26346352, + |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.03e-43 | 7 |
immune organ | 6.03e-43 | 7 |
thymus | 8.36e-34 | 4 |
hemolymphoid system gland | 8.36e-34 | 4 |
thymic region | 8.36e-34 | 4 |
pharyngeal gland | 8.36e-34 | 4 |
thymus primordium | 8.36e-34 | 4 |
pharyngeal epithelium | 6.07e-23 | 6 |
neck | 3.25e-14 | 10 |
gland of gut | 3.25e-14 | 10 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 4.97e-11 | 29 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.84e-34 | 1 |
monogenic disease | 1.84e-34 | 1 |
xeroderma pigmentosum | 1.84e-34 | 1 |