FFCP PHASE1:Hg19::chr2:15319181..15319189,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:15319181..15319189,- | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr2:15319181..15319189,- | |description=CAGE_peak_at_chr2:15319181..15319189,- | ||
|id=chr2:15319181..15319189,- | |id=chr2:15319181..15319189,- | ||
|ontology_enrichment_celltype=CL:0000623!2.04e-16!3;CL:0000825!2.04e-16!3;CL:0002127!1.82e-13!1;CL:0000914!1.82e-13!1;CL:0000911!1.82e-13!1;CL:0000814!1.82e-13!1;CL:0002042!1.82e-13!1;CL:0002039!1.82e-13!1;CL:0002040!1.82e-13!1;CL:0002041!1.82e-13!1;CL:0002566!1.09e-12!1;CL:0000084!6.39e-08!25;CL:0000827!6.39e-08!25;CL:0000838!7.43e-08!52;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53;CL:0000893!2.28e-07!2;CL:0002489!2.28e-07!2;CL:0000809!2.28e-07!2;CL:0000808!2.28e-07!2;CL:0000894!2.28e-07!2;CL:0000806!2.28e-07!2;CL:0000807!2.28e-07!2;CL:0000805!2.28e-07!2;CL:0002425!2.28e-07!2;CL:0001014!4.17e-07!2;CL:0001016!4.17e-07!2;CL:0000738!4.91e-07!140 | |ontology_enrichment_celltype=CL:0000623!2.04e-16!3;CL:0000825!2.04e-16!3;CL:0002127!1.82e-13!1;CL:0000914!1.82e-13!1;CL:0000911!1.82e-13!1;CL:0000814!1.82e-13!1;CL:0002042!1.82e-13!1;CL:0002039!1.82e-13!1;CL:0002040!1.82e-13!1;CL:0002041!1.82e-13!1;CL:0002566!1.09e-12!1;CL:0000084!6.39e-08!25;CL:0000827!6.39e-08!25;CL:0000838!7.43e-08!52;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53;CL:0000893!2.28e-07!2;CL:0002489!2.28e-07!2;CL:0000809!2.28e-07!2;CL:0000808!2.28e-07!2;CL:0000894!2.28e-07!2;CL:0000806!2.28e-07!2;CL:0000807!2.28e-07!2;CL:0000805!2.28e-07!2;CL:0002425!2.28e-07!2;CL:0001014!4.17e-07!2;CL:0001016!4.17e-07!2;CL:0000738!4.91e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.42e-50;1!CL:0000911;2.42e-50;1!CL:0000814;2.42e-50;1!CL:0000084;5.06e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.42e-50,1;CL:0000914,2.42e-50,1;CL:0000911,2.42e-50,1;CL:0000814,2.42e-50,1;CL:0002042,2.42e-50,1;CL:0002039,2.42e-50,1;CL:0002040,2.42e-50,1;CL:0002041,2.42e-50,1;CL:0000893,5.56e-26,2;CL:0002489,5.56e-26,2;CL:0000809,5.56e-26,2;CL:0000808,5.56e-26,2;CL:0000894,5.56e-26,2;CL:0000806,5.56e-26,2;CL:0000807,5.56e-26,2;CL:0000805,5.56e-26,2;CL:0002425,5.56e-26,2;CL:0000084,5.06e-09,25;CL:0000827,5.06e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;5.56e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002134!2.95e-13!1;UBERON:0005208!2.95e-13!1;UBERON:0005946!2.95e-13!1;UBERON:0005965!2.95e-13!1;UBERON:0002078!2.95e-13!1;UBERON:0001736!3.76e-13!1;UBERON:0006298!3.76e-13!1;UBERON:0002081!2.91e-07!2;UBERON:0002133!2.91e-07!2;UBERON:0001829!3.28e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.00e-13,4;UBERON:0005058,1.00e-13,4;UBERON:0009113,1.00e-13,4;UBERON:0003295,1.00e-13,4;UBERON:0005562,1.00e-13,4;UBERON:0003351,1.32e-09,6;UBERON:0004177,2.03e-08,7;UBERON:0005057,2.03e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43852784948307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43852784948307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:15319181..15319189,- | |short_description=p@chr2:15319181..15319189,- | ||
}} | }} |
Latest revision as of 01:28, 29 July 2015
Short description: | p@chr2:15319181..15319189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:15319181..15319189, - |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.42e-50 | 1 |
immature NK T cell | 2.42e-50 | 1 |
effector T cell | 2.42e-50 | 1 |
mature NK T cell | 2.42e-50 | 1 |
immature NK T cell stage IV | 2.42e-50 | 1 |
immature NK T cell stage I | 2.42e-50 | 1 |
immature NK T cell stage II | 2.42e-50 | 1 |
immature NK T cell stage III | 2.42e-50 | 1 |
thymocyte | 5.56e-26 | 2 |
double negative thymocyte | 5.56e-26 | 2 |
double-positive, alpha-beta thymocyte | 5.56e-26 | 2 |
DN4 thymocyte | 5.56e-26 | 2 |
DN1 thymic pro-T cell | 5.56e-26 | 2 |
DN2 thymocyte | 5.56e-26 | 2 |
DN3 thymocyte | 5.56e-26 | 2 |
immature single positive thymocyte | 5.56e-26 | 2 |
early T lineage precursor | 5.56e-26 | 2 |
T cell | 5.06e-09 | 25 |
pro-T cell | 5.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.00e-13 | 4 |
hemolymphoid system gland | 1.00e-13 | 4 |
thymic region | 1.00e-13 | 4 |
pharyngeal gland | 1.00e-13 | 4 |
thymus primordium | 1.00e-13 | 4 |
pharyngeal epithelium | 1.32e-09 | 6 |
hemopoietic organ | 2.03e-08 | 7 |
immune organ | 2.03e-08 | 7 |