FFCP PHASE1:Hg19::chr2:157189405..157189420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:157189405..157189420,+ | |||
|coexpression_cluster_id=C1672 | |coexpression_cluster_id=C1672 | ||
|description=CAGE_peak_at_chr2:157189405..157189420,+ | |description=CAGE_peak_at_chr2:157189405..157189420,+ | ||
|id=chr2:157189405..157189420,+ | |id=chr2:157189405..157189420,+ | ||
|ontology_enrichment_celltype=CL:0000860!5.59e-31!45;CL:0002057!7.24e-31!42;CL:0000766!1.26e-22!76;CL:0000839!2.60e-22!70;CL:0000557!8.39e-22!71;CL:0002009!1.94e-19!65;CL:0002031!2.46e-19!124;CL:0002194!1.26e-18!63;CL:0000576!1.26e-18!63;CL:0000040!1.26e-18!63;CL:0000559!1.26e-18!63;CL:0000738!1.29e-18!140;CL:0002087!3.02e-16!119;CL:0000763!4.21e-14!112;CL:0000049!4.21e-14!112;CL:0002032!1.07e-13!165;CL:0000837!1.07e-13!165;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0000988!1.93e-13!182 | |ontology_enrichment_celltype=CL:0000860!5.59e-31!45;CL:0002057!7.24e-31!42;CL:0000766!1.26e-22!76;CL:0000839!2.60e-22!70;CL:0000557!8.39e-22!71;CL:0002009!1.94e-19!65;CL:0002031!2.46e-19!124;CL:0002194!1.26e-18!63;CL:0000576!1.26e-18!63;CL:0000040!1.26e-18!63;CL:0000559!1.26e-18!63;CL:0000738!1.29e-18!140;CL:0002087!3.02e-16!119;CL:0000763!4.21e-14!112;CL:0000049!4.21e-14!112;CL:0002032!1.07e-13!165;CL:0000837!1.07e-13!165;CL:0000037!1.18e-13!172;CL:0000566!1.18e-13!172;CL:0000988!1.93e-13!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-51;33!CL:0002057;2.25e-51;33!CL:0000473;1.07e-33;39!CL:0000234;1.07e-33;39!CL:0000576;2.32e-24;48!CL:0000766;1.55e-18;69!CL:0000097;1.10e-08;5!CL:0000763;2.77e-08;100!CL:0002087;6.88e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.93e-45,42;CL:0002057,6.93e-45,42;CL:0000473,3.20e-38,48;CL:0000234,3.20e-38,48;CL:0000766,1.78e-34,72;CL:0000839,7.79e-34,66;CL:0000557,3.37e-33,67;CL:0002194,6.50e-29,59;CL:0000576,6.50e-29,59;CL:0000040,6.50e-29,59;CL:0000559,6.50e-29,59;CL:0002009,1.03e-27,61;CL:0000763,3.13e-21,108;CL:0000049,3.13e-21,108;CL:0000738,1.34e-19,136;CL:0002031,1.42e-19,120;CL:0002087,1.15e-16,115;CL:0002032,5.76e-15,161;CL:0000837,5.76e-15,161;CL:0000037,7.47e-15,168;CL:0000988,1.56e-14,177;CL:0000097,7.96e-09,5;CL:0002028,7.96e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-33;42!UBERON:0006215;3.14e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.01e-19!80;UBERON:0002390!5.29e-18!102;UBERON:0003061!5.29e-18!102;UBERON:0001474!1.39e-17!86;UBERON:0007023!1.29e-16!115;UBERON:0004765!4.00e-16!101;UBERON:0001434!4.00e-16!101;UBERON:0002193!4.37e-15!112;UBERON:0002405!5.04e-13!115;UBERON:0001049!1.88e-11!57;UBERON:0005068!1.88e-11!57;UBERON:0006241!1.88e-11!57;UBERON:0007135!1.88e-11!57;UBERON:0002616!2.23e-08!59;UBERON:0000955!4.09e-08!69;UBERON:0006238!4.09e-08!69;UBERON:0003080!5.55e-08!42;UBERON:0002780!1.98e-07!41;UBERON:0001890!1.98e-07!41;UBERON:0006240!1.98e-07!41;UBERON:0001017!4.33e-07!82 | |ontology_enrichment_uberon=UBERON:0002371!2.01e-19!80;UBERON:0002390!5.29e-18!102;UBERON:0003061!5.29e-18!102;UBERON:0001474!1.39e-17!86;UBERON:0007023!1.29e-16!115;UBERON:0004765!4.00e-16!101;UBERON:0001434!4.00e-16!101;UBERON:0002193!4.37e-15!112;UBERON:0002405!5.04e-13!115;UBERON:0001049!1.88e-11!57;UBERON:0005068!1.88e-11!57;UBERON:0006241!1.88e-11!57;UBERON:0007135!1.88e-11!57;UBERON:0002616!2.23e-08!59;UBERON:0000955!4.09e-08!69;UBERON:0006238!4.09e-08!69;UBERON:0003080!5.55e-08!42;UBERON:0002780!1.98e-07!41;UBERON:0001890!1.98e-07!41;UBERON:0006240!1.98e-07!41;UBERON:0001017!4.33e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.16e-28,76;UBERON:0001474,3.17e-27,82;UBERON:0004765,5.30e-24,90;UBERON:0002390,6.90e-23,98;UBERON:0003061,6.90e-23,98;UBERON:0002405,1.83e-21,93;UBERON:0001434,1.05e-20,100;UBERON:0002193,6.47e-20,108;UBERON:0002204,8.84e-10,167;UBERON:0003081,1.56e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0,0.928896739896456,0,0,0,0,0,0,0,0.802177789880567,0.434021741431704,0,0,0,0.436194716338694,1.51150377475524,2.18325655069035,4.18372266430232,8.22335776043652,14.2464930611748,3.45230870786581,2.56160706529101,8.27687804610048,9.65287906062532,20.6555098746824,35.2108865145289,3.01187743268168,3.82068610080984,8.09004544002305,7.34601341690166,6.09765151444578,18.5407766481722,0.659702600373432,1.39624560335142,0.426224750532694,0.870627715885752,2.26954089876456,9.34233373493363,12.8136819280939,9.38669253156363,14.1172749058326,0.605399502633369,2.20966581592539,3.48108626184973,0.845021145247767,0.637812899895131,1.25795187305026,2.92054440980887,1.50176892841506,0.64290234678832,0.285012743741249,0.79566670879636,0.730656615058536,0,1.09227722252426,0,0,0.400395987036012,0,0,0,0,3.52342313622563,0.382273228125229,1.32171328579026,0,0.263384084775077,0.590129310341499,0.786021525498329,1.64481199199607,0.167186495390678,0.977766799900771,0.473447805734733,0,0.111410456885174,0.589211814949674,1.32920336750173,0.812411591295047,0,0.130059347559878,0.328875809207352,0,0,0.593146252648242,0.535081656179426,2.09071047609954,0,0.766440987203842,0.68725489096526,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.80642697289893,0.267440195783507,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.529636723252875,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.45071417671979,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,6.00940313466411,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,4.76854665743776,1.72943944100354,7.19581870530366,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,1.41177339907723,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0.36807447515742,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0.166849141711909,0,1.11362469558097,0,0,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0.0874599999961957,2.17499872630438,0,0,0,0,0,0.173624994933292,1.77148277162768,0.120596438625408,1.52581736317083,1.99042667876204,3.25102380848902,0.658156191461918,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.530745387020035,0,1.77912677208373,0.123563938946503,0.417687798021821,2.02203398942031,0.802577647298789,1.63985112007737,0,0,0,1.18375320854817,0,1.22429104652196,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0.171986032471617,0.387025325156341,0.0730893170861856,0.0821154570532092,0.484945082442097,0,0.90392296312213,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,1.39641200636127,1.14580212005842,0.717873024576814,0,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0.2249738915515,0.77380195455795,0.607495566580247,0,0,0.367182116944987,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.574647645245373,0,0,0.879313402068495,0,0,0.66116300871345,0,0,0.427149650270779,0,2.07119527673598,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0.573409195690071,1.33114861844223,0.683060432355218,0.276697269872462,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0.467426619694449,1.10961172300523,0.378806010550178,0.251567901752575,0,0,0.756154618816195,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.18184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| ||
|short_description=p@chr2:157189405..157189420,+ | |short_description=p@chr2:157189405..157189420,+ | ||
}} | }} |
Latest revision as of 01:34, 29 July 2015
Short description: | p@chr2:157189405..157189420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:157189405..157189420, + |
Coexpression cluster: | C1672_seminal_CD14_Mast_CD34_immature_mesenchymal_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.93e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.93e-45 | 42 |
defensive cell | 3.20e-38 | 48 |
phagocyte | 3.20e-38 | 48 |
myeloid leukocyte | 1.78e-34 | 72 |
myeloid lineage restricted progenitor cell | 7.79e-34 | 66 |
granulocyte monocyte progenitor cell | 3.37e-33 | 67 |
monopoietic cell | 6.50e-29 | 59 |
monocyte | 6.50e-29 | 59 |
monoblast | 6.50e-29 | 59 |
promonocyte | 6.50e-29 | 59 |
macrophage dendritic cell progenitor | 1.03e-27 | 61 |
myeloid cell | 3.13e-21 | 108 |
common myeloid progenitor | 3.13e-21 | 108 |
leukocyte | 1.34e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.42e-19 | 120 |
nongranular leukocyte | 1.15e-16 | 115 |
hematopoietic oligopotent progenitor cell | 5.76e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-15 | 161 |
hematopoietic stem cell | 7.47e-15 | 168 |
hematopoietic cell | 1.56e-14 | 177 |
mast cell | 7.96e-09 | 5 |
basophil mast progenitor cell | 7.96e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.16e-28 | 76 |
bone element | 3.17e-27 | 82 |
skeletal element | 5.30e-24 | 90 |
hematopoietic system | 6.90e-23 | 98 |
blood island | 6.90e-23 | 98 |
immune system | 1.83e-21 | 93 |
skeletal system | 1.05e-20 | 100 |
hemolymphoid system | 6.47e-20 | 108 |
musculoskeletal system | 8.84e-10 | 167 |
lateral plate mesoderm | 1.56e-08 | 203 |