FFCP PHASE1:Hg19::chr2:21239379..21239390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:21239379..21239390,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr2:21239379..21239390,- | |description=CAGE_peak_at_chr2:21239379..21239390,- | ||
|id=chr2:21239379..21239390,- | |id=chr2:21239379..21239390,- | ||
|ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!6.80e-10!59 | |ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!6.80e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.81e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.43e-66,12;CL:0000223,9.26e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.47e-49;11!UBERON:0009497;5.21e-42;13!UBERON:0001041;2.07e-18;30!UBERON:0003104;8.86e-18;31!CL:0000223;3.39e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.20e-73;19!UBERON:0006925;2.20e-73;19!UBERON:0002423;8.15e-56;25!UBERON:0002365;2.66e-43;31!UBERON:0002330;2.66e-43;31!UBERON:0002368;3.34e-38;33!UBERON:0000949;6.90e-28;43!UBERON:0005172;1.35e-16;52!UBERON:0005173;1.35e-16;52!UBERON:0002417;1.55e-14;58!UBERON:0000916;1.55e-14;58!UBERON:0002530;2.12e-14;57!UBERON:0001007;2.54e-11;81 | |||
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|short_description=p@chr2:21239379..21239390,- | |short_description=p@chr2:21239379..21239390,- | ||
}} | }} | ||
Latest revision as of 05:51, 29 July 2015
| Short description: | p@chr2:21239379..21239390, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:21239379..21239390, - |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 7.43e-66 | 12 |
| endodermal cell | 9.26e-14 | 58 |