FFCP PHASE1:Hg19::chr2:213770576..213770587,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:213770576..213770587,+ | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr2:213770576..213770587,+ | |||
|id=chr2:213770576..213770587,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.94e-22!13;CL:0002076!7.56e-19!43;CL:0002159!3.42e-18!13;CL:0000223!1.37e-14!59;CL:0000066!1.32e-12!254;CL:0002166!2.05e-12!3;CL:0002328!4.05e-12!3;CL:0002202!1.21e-10!9;CL:0002632!1.21e-10!9;CL:0000244!1.16e-09!4;CL:0000731!1.16e-09!4;CL:0000317!4.19e-09!2;CL:1000448!4.19e-09!2;CL:0002308!4.19e-09!2;CL:0002140!4.19e-09!2;CL:0000575!1.10e-08!2;CL:0000622!1.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000317;9.82e-37;2!CL:1000448;9.82e-37;2!CL:0002308;9.82e-37;2!CL:0002140;9.82e-37;2!CL:0000307;7.01e-25;3!CL:0002159;7.32e-21;14!CL:0000244;3.91e-19;4!CL:0000731;3.91e-19;4!CL:0000362;1.32e-18;9!CL:0000622;2.33e-15;5!CL:0002368;3.34e-13;13!CL:0000154;5.76e-13;6!CL:0000150;5.86e-09;9!CL:0002202;5.86e-09;9!CL:0002632;5.86e-09;9!CL:0002077;1.77e-08;34!CL:0002166;2.63e-07;3!CL:0002231;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.70e-36,2;CL:1000448,1.70e-36,2;CL:0002308,1.70e-36,2;CL:0002140,1.70e-36,2;CL:0000068,1.64e-24,3;CL:0000069,1.64e-24,3;CL:0000307,1.64e-24,3;CL:0000377,1.64e-24,3;CL:0002159,6.97e-21,14;CL:0000244,3.57e-19,4;CL:0000731,3.57e-19,4;CL:0000362,1.58e-18,9;CL:0000622,2.90e-15,5;CL:0002368,4.47e-13,13;CL:0000154,6.90e-13,6;CL:0000150,6.61e-09,9;CL:0002202,7.75e-09,9;CL:0002632,7.75e-09,9;CL:0002077,8.19e-09,34;CL:0000066,6.20e-08,253;CL:0000223,7.45e-08,58;CL:0002166,2.05e-07,3;CL:0002231,2.19e-07,3;CL:0002076,3.42e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;7.01e-25;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;2.48e-10;2!DOID:4905;2.48e-10;2!DOID:3498;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.07e-10,2;DOID:4905,2.07e-10,2;DOID:3498,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!7.58e-13!5;UBERON:0004815!4.05e-12!3;UBERON:0002031!4.05e-12!3;UBERON:0005910!1.04e-10!6;UBERON:0004119!1.99e-09!169;UBERON:0000925!1.99e-09!169;UBERON:0006595!1.99e-09!169;UBERON:0001708!2.05e-09!4;UBERON:0001704!2.05e-09!4;UBERON:0007196!2.53e-09!14;UBERON:0001558!2.53e-09!14;UBERON:0002185!3.40e-09!4;UBERON:0002419!4.19e-09!2;UBERON:0007771!4.19e-09!2;UBERON:0003297!4.19e-09!2;UBERON:0001821!4.19e-09!2;UBERON:0003487!4.19e-09!2;UBERON:0001820!4.19e-09!2;UBERON:0005089!4.19e-09!2;UBERON:0005088!4.19e-09!2;UBERON:0000065!5.34e-09!53;UBERON:0001004!3.43e-08!72;UBERON:0005157!7.77e-08!51;UBERON:0005178!2.49e-07!34;UBERON:0002224!2.49e-07!34;UBERON:0005181!4.48e-07!35;UBERON:0005911!8.90e-07!82;UBERON:0000485!9.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;9.82e-37;2!UBERON:0007771;9.82e-37;2!UBERON:0003297;9.82e-37;2!UBERON:0001821;9.82e-37;2!UBERON:0003487;9.82e-37;2!UBERON:0001820;9.82e-37;2!UBERON:0000365;1.62e-15;5!UBERON:0005910;4.25e-13;6!UBERON:0001003;1.96e-11;15!UBERON:0007376;1.96e-11;15!UBERON:0003126;2.98e-11;7!UBERON:0001005;2.98e-11;7!UBERON:0000486;5.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.70e-36,2;UBERON:0007771,1.70e-36,2;UBERON:0003297,1.70e-36,2;UBERON:0001821,1.70e-36,2;UBERON:0003487,1.70e-36,2;UBERON:0001820,1.70e-36,2;UBERON:0005089,1.70e-36,2;UBERON:0005088,1.70e-36,2;UBERON:0000365,1.51e-15,5;UBERON:0005910,4.01e-13,6;UBERON:0001003,2.18e-11,15;UBERON:0007376,2.18e-11,15;UBERON:0007383,2.18e-11,15;UBERON:0003126,4.27e-11,7;UBERON:0001005,4.27e-11,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,1.87467667973554,0.335964256397719,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,23.7359645239926,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0,1.08890984861323,0,1.72202149068492,0,2.66058092122005,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:213770576..213770587,+ | |||
}} |
Latest revision as of 05:55, 29 July 2015
Short description: | p@chr2:213770576..213770587, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:213770576..213770587, + |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.70e-36 | 2 |
epithelial cell of sweat gland | 1.70e-36 | 2 |
epithelial cell of skin gland | 1.70e-36 | 2 |
acinar cell of sebaceous gland | 1.70e-36 | 2 |
duct epithelial cell | 1.64e-24 | 3 |
branched duct epithelial cell | 1.64e-24 | 3 |
tracheal epithelial cell | 1.64e-24 | 3 |
tracheoblast | 1.64e-24 | 3 |
general ecto-epithelial cell | 6.97e-21 | 14 |
transitional epithelial cell | 3.57e-19 | 4 |
urothelial cell | 3.57e-19 | 4 |
epidermal cell | 1.58e-18 | 9 |
acinar cell | 2.90e-15 | 5 |
respiratory epithelial cell | 4.47e-13 | 13 |
protein secreting cell | 6.90e-13 | 6 |
glandular epithelial cell | 6.61e-09 | 9 |
epithelial cell of tracheobronchial tree | 7.75e-09 | 9 |
epithelial cell of lower respiratory tract | 7.75e-09 | 9 |
ecto-epithelial cell | 8.19e-09 | 34 |
epithelial cell | 6.20e-08 | 253 |
endodermal cell | 7.45e-08 | 58 |
epithelial cell of Malassez | 2.05e-07 | 3 |
epithelial cell of prostate | 2.19e-07 | 3 |
endo-epithelial cell | 3.42e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.70e-36 | 2 |
epidermis gland | 1.70e-36 | 2 |
gland of integumental system | 1.70e-36 | 2 |
sebaceous gland | 1.70e-36 | 2 |
skin sebaceous gland | 1.70e-36 | 2 |
sweat gland | 1.70e-36 | 2 |
sweat gland placode | 1.70e-36 | 2 |
sebaceous gland placode | 1.70e-36 | 2 |
urothelium | 1.51e-15 | 5 |
transitional epithelium | 4.01e-13 | 6 |
skin epidermis | 2.18e-11 | 15 |
outer epithelium | 2.18e-11 | 15 |
enveloping layer of ectoderm | 2.18e-11 | 15 |
trachea | 4.27e-11 | 7 |
respiratory airway | 4.27e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.07e-10 | 2 |
pancreatic carcinoma | 2.07e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.07e-10 | 2 |