FFCP PHASE1:Hg19::chr2:237683038..237683048,+: Difference between revisions
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|id=chr2:237683038..237683048,+
|short_description=p@chr2:237683038..237683048,+
|description=CAGE_peak_at_chr2:237683038..237683048,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:237683038..237683048,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr2:237683038..237683048,+ | |||
|id=chr2:237683038..237683048,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.27e-32!3;CL:0002577!1.27e-32!3;CL:0002541!6.28e-32!3;CL:0002536!1.66e-22!2;CL:0002537!1.16e-19!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.17e-66;19!CL:0002536;1.34e-40;2!CL:0002577;1.06e-27;3!CL:0002541;5.31e-27;3!CL:0002537;9.94e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.31e-66,19;CL:0002536,1.34e-40,2;CL:0002577,1.06e-27,3;CL:0002541,5.31e-27,3;CL:0002537,8.82e-17,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.22e-106!14;UBERON:0000158!4.22e-106!14;UBERON:0003124!2.01e-72!7;UBERON:0000478!2.73e-61!24;UBERON:0001987!2.82e-42!4;UBERON:0004340!2.82e-42!4;UBERON:0000305!7.22e-38!7;UBERON:0004871!3.80e-33!8;UBERON:0000476!6.28e-32!3;UBERON:0000920!6.28e-32!3;UBERON:0004923!7.00e-25!57;UBERON:0000995!2.85e-08!21;UBERON:0005795!6.67e-08!22;UBERON:0003975!6.67e-08!22;UBERON:0004175!5.68e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.53e-70;10!UBERON:0000158;2.53e-70;10!UBERON:0000478;3.77e-52;24!UBERON:0000305;2.36e-45;7!UBERON:0003124;5.31e-27;3!UBERON:0000920;5.31e-27;3!UBERON:0001987;4.68e-21;4!UBERON:0004923;2.97e-09;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.90e-89,14;UBERON:0000158,1.90e-89,14;UBERON:0000478,3.41e-52,24;UBERON:0000305,1.99e-45,7;UBERON:0003124,1.99e-45,7;UBERON:0004871,7.86e-40,8;UBERON:0000920,5.31e-27,3;UBERON:0001987,4.68e-21,4;UBERON:0004340,4.68e-21,4;UBERON:0004923,7.00e-19,66 | |||
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|short_description=p@chr2:237683038..237683048,+ | |||
}} | }} |
Latest revision as of 08:08, 29 July 2015
Short description: | p@chr2:237683038..237683048, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237683038..237683048, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.31e-66 | 19 |
amniotic epithelial cell | 1.34e-40 | 2 |
placental epithelial cell | 1.06e-27 | 3 |
chorionic membrane mesenchymal stem cell | 5.31e-27 | 3 |
amnion mesenchymal stem cell | 8.82e-17 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.90e-89 | 14 |
membranous layer | 1.90e-89 | 14 |
extraembryonic structure | 3.41e-52 | 24 |
amnion | 1.99e-45 | 7 |
chorion | 1.99e-45 | 7 |
somatic layer of lateral plate mesoderm | 7.86e-40 | 8 |
egg chorion | 5.31e-27 | 3 |
placenta | 4.68e-21 | 4 |
allantois | 4.68e-21 | 4 |
organ component layer | 7.00e-19 | 66 |