FFCP PHASE1:Hg19::chr2:238289886..238289905,-: Difference between revisions
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|id=chr2:238289886..238289905,-
|short_description=p@chr2:238289886..238289905,-
|description=CAGE_peak_at_chr2:238289886..238289905,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238289886..238289905,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238289886..238289905,- | |||
|id=chr2:238289886..238289905,- | |||
|ontology_enrichment_celltype=CL:0000055!6.00e-44!180;CL:0000057!1.81e-35!75;CL:0000048!2.87e-20!430;CL:0000723!3.43e-19!436;CL:0000034!1.47e-18!444;CL:0002620!2.56e-15!23;CL:0000183!5.55e-15!59;CL:0000680!2.40e-14!57;CL:0000056!2.40e-14!57;CL:0000355!2.40e-14!57;CL:0000187!7.99e-14!54;CL:0002371!5.67e-13!591;CL:0002320!2.93e-12!365;CL:0000393!4.31e-11!60;CL:0000211!4.31e-11!60;CL:0000192!2.76e-10!42;CL:0000514!2.76e-10!42;CL:0000134!4.51e-10!358;CL:0000144!6.00e-10!625;CL:0000219!5.20e-09!390;CL:0000499!1.76e-07!27;CL:0002570!2.02e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.55e-16;23!CL:0000057;2.39e-12;73!CL:0002320;9.69e-10;188!CL:0000188;2.24e-09;9!CL:0000134;4.34e-09;55!CL:0002570;1.06e-08;8!CL:0000723;1.11e-08;61!CL:0000048;7.76e-08;58!CL:0000034;2.91e-07;69!CL:0002552;4.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.79e-32,76;CL:0000048,1.35e-23,427;CL:0000723,8.70e-23,433;CL:0000034,9.60e-22,441;CL:0002320,1.86e-17,361;CL:0002620,1.62e-16,23;CL:0000134,4.00e-14,354;CL:0000219,4.12e-11,386;CL:0000680,2.36e-10,58;CL:0000056,2.36e-10,58;CL:0000355,2.36e-10,58;CL:0000187,1.88e-09,55;CL:0000188,1.94e-09,9;CL:0002570,8.98e-09,8;CL:0000393,7.39e-08,61;CL:0000211,7.39e-08,61;CL:0002552,5.30e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.36e-08;5!DOID:450;1.36e-08;5!DOID:66;1.36e-08;5!DOID:423;1.36e-08;5!DOID:0080000;1.36e-08;5!DOID:11722;1.36e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.59e-08,5;DOID:450,1.59e-08,5;DOID:66,1.59e-08,5;DOID:423,1.59e-08,5;DOID:0080000,1.59e-08,5;DOID:11722,1.59e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.85e-18!83;UBERON:0002329!6.85e-18!83;UBERON:0003077!6.85e-18!83;UBERON:0003059!6.85e-18!83;UBERON:0007282!6.85e-18!83;UBERON:0009618!6.85e-18!83;UBERON:0007285!6.85e-18!83;UBERON:0004290!8.03e-16!70;UBERON:0002385!6.59e-13!63;UBERON:0001015!6.59e-13!63;UBERON:0000383!6.59e-13!63;UBERON:0000486!1.72e-12!82;UBERON:0001134!1.84e-12!61;UBERON:0002036!1.84e-12!61;UBERON:0003082!1.84e-12!61;UBERON:0002384!2.23e-12!375;UBERON:0005256!8.26e-12!143;UBERON:0002199!2.15e-11!45;UBERON:0002416!2.15e-11!45;UBERON:0003102!3.50e-11!95;UBERON:0002097!1.44e-09!40;UBERON:0002100!3.59e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.77e-10;198!UBERON:0002199;3.50e-10;46!UBERON:0002416;3.50e-10;46!UBERON:0002097;2.42e-09;41!UBERON:0003102;1.53e-08;50!UBERON:0002204;1.08e-07;70!UBERON:0001134;5.70e-07;16!UBERON:0002036;5.70e-07;16!UBERON:0001013;6.13e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.57e-17,371;UBERON:0002199,3.11e-15,46;UBERON:0002416,3.11e-15,46;UBERON:0003102,2.34e-13,99;UBERON:0002097,2.73e-12,41;UBERON:0002329,3.08e-11,71;UBERON:0003059,3.08e-11,71;UBERON:0007282,3.08e-11,71;UBERON:0004290,3.08e-11,71;UBERON:0009618,3.08e-11,71;UBERON:0003077,5.89e-11,72;UBERON:0007285,5.89e-11,72;UBERON:0007524,1.10e-10,73;UBERON:0007503,1.94e-09,78;UBERON:0001134,3.33e-09,62;UBERON:0002036,3.33e-09,62;UBERON:0003082,3.33e-09,62;UBERON:0000486,5.09e-09,83;UBERON:0002385,1.09e-08,64;UBERON:0001015,1.09e-08,64;UBERON:0000383,1.09e-08,64;UBERON:0001013,5.65e-07,14 | |||
|phase1_expression=3.27021082687002,4.92431204949261,0.986680828671798,1.0007329835313,1.78784437770915,0,0,2.52687949370732,1.30592814099919,0.737201809504527,0,0.218441372130172,0,1.60896258848061,1.65698687863958,2.01697543935533,0.602694528023977,0,1.46379839637152,0.123121058076788,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,7.52006865953834,1.59331170856906,1.5905718941022,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.64619665163954,1.19168262731897,12.9076479336966,1.41867352879343,1.68203280042692,1.06748995729705,0.74000264525148,1.24484414159907,4.17603083416033,2.28846664358842,1.21085942115945,4.03323147135999,0.234321431833797,0.936480230490962,0.570471821544449,1.94283284717341,1.64408298101271,2.26622122115384,0.98315564691574,1.63323337003915,2.08818339430006,4.64966015290945,1.18800285728205,7.66527480763526,0.910161361938026,2.15585442544872,1.68336113954066,2.12701483782339,0.277064115484183,0,3.37136575378922,1.35214253015937,0.226864366320042,5.38168907066586,5.33893472046419,3.39091041855299,7.80236849819446,4.01904864029912,3.86460810068444,2.23340227597908,4.55696097051419,4.18979122193154,3.28163906517349,1.84099797284599,3.23292113637624,10.2952781829818,1.81353776809752,1.01736355386293,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,9.00537313470039,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,3.11980435583874,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,1.00917975910825,0.43596006883328,0.7333828582095,0.517086863031111,3.57656445851882,0.845302752556,1.86156681609409,3.12022310734098,1.02882949704857,0,1.3321108950805,2.00169191121407,5.96883765930587,0.823240336780769,1.30294473717494,0.355391948742546,0,0,0,0,0,0,0,1.67737398844108,3.44585807502342,0,2.75084482668401,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,2.00068208423871,1.35632511849868,0.623912584592421,1.78428988797162,0.630809660135739,0.35142424497814,0.601892199455438,2.27407504055985,2.0694614258501,2.65690239414175,0.921845842708516,1.65078867489357,1.56640925970192,3.43143423810856,0,0,0,0,0,0.604780586659361,0.992431231275107,1.53461973288062,4.77122160536225,0.640695746278505,0,0.965123526861645,0,4.47208112027701,3.72879623157567,0.98552587216571,3.11552657510173,3.60252173225874,0,0,0,4.13332013392584,5.46273504020151,3.93373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,1.7400729292582,3.23502095940753,4.1445992176055,2.20538515975249,5.58585273315023,6.67076792005451,2.47157219506693,1.4245125703478,0,0,0,0,0,4.7221852024596,1.3940745403212,0.924100740528266,0,0,0.37064843820784,0.143124886741991,1.48863347743867,0.316379424718726,0.190630193923825,1.02359116524534,2.99557291623744,1.27281299170375,0,0.719489830333259,3.29444435683266,0.942499218765491,0.606547444719948,0,1.26377536871694,0.48763373908959,0.487426979262569,8.45201174054043,3.27599787379166,6.78746073377821,0,1.10273068709225,0,0.438450885253763,1.15755106853338,1.9676842561399,0.202910376962704,0,2.25356482025793,0.286822704408103,0.491245205065606,0.35667105148125,2.12856638442359,0.844430541190656,1.31717957183961,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,2.1983422416447,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0.343972064943233,0,0,0,0,0,0.225980740780532,0.959293472527256,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,1.73396969981747,0.288950589901519,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,1.62899880526114,4.32110745600634,5.55198512185996,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.395223263795889,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47005057426526,0,0,3.4328604663981,5.37540612648616,2.77402930751307,3.59865710022669,7.29546915082468,8.00830099436882,2.05956061557231,4.08323494160745,2.95330681107283,0.887130899937803,0.955780602982214,0.449803112163605,1.55262956876259,1.65882483136342,4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| ||
|short_description=p@chr2:238289886..238289905,- | |||
}} | }} |
Latest revision as of 08:11, 29 July 2015
Short description: | p@chr2:238289886..238289905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238289886..238289905, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.79e-32 | 76 |
multi fate stem cell | 1.35e-23 | 427 |
somatic stem cell | 8.70e-23 | 433 |
stem cell | 9.60e-22 | 441 |
connective tissue cell | 1.86e-17 | 361 |
skin fibroblast | 1.62e-16 | 23 |
mesenchymal cell | 4.00e-14 | 354 |
motile cell | 4.12e-11 | 386 |
muscle precursor cell | 2.36e-10 | 58 |
myoblast | 2.36e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-10 | 58 |
muscle cell | 1.88e-09 | 55 |
cell of skeletal muscle | 1.94e-09 | 9 |
mesenchymal stem cell of adipose | 8.98e-09 | 8 |
electrically responsive cell | 7.39e-08 | 61 |
electrically active cell | 7.39e-08 | 61 |
fibroblast of gingiva | 5.30e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.57e-17 | 371 |
integument | 3.11e-15 | 46 |
integumental system | 3.11e-15 | 46 |
surface structure | 2.34e-13 | 99 |
skin of body | 2.73e-12 | 41 |
somite | 3.08e-11 | 71 |
presomitic mesoderm | 3.08e-11 | 71 |
presumptive segmental plate | 3.08e-11 | 71 |
dermomyotome | 3.08e-11 | 71 |
trunk paraxial mesoderm | 3.08e-11 | 71 |
paraxial mesoderm | 5.89e-11 | 72 |
presumptive paraxial mesoderm | 5.89e-11 | 72 |
dense mesenchyme tissue | 1.10e-10 | 73 |
epithelial vesicle | 1.94e-09 | 78 |
skeletal muscle tissue | 3.33e-09 | 62 |
striated muscle tissue | 3.33e-09 | 62 |
myotome | 3.33e-09 | 62 |
multilaminar epithelium | 5.09e-09 | 83 |
muscle tissue | 1.09e-08 | 64 |
musculature | 1.09e-08 | 64 |
musculature of body | 1.09e-08 | 64 |
adipose tissue | 5.65e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.59e-08 | 5 |
myotonic disease | 1.59e-08 | 5 |
muscle tissue disease | 1.59e-08 | 5 |
myopathy | 1.59e-08 | 5 |
muscular disease | 1.59e-08 | 5 |
myotonic dystrophy | 1.59e-08 | 5 |