FFCP PHASE1:Hg19::chr2:238419927..238419937,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238419927..238419937,+ to FFCP PHASE1:Hg19::chr2:238419927..238419937,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238419927..238419937,+ | |||
|description=CAGE_peak_at_chr2:238419927..238419937,+ | |||
|id=chr2:238419927..238419937,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.38e-07!5;CL:0000457!3.38e-07!5;CL:0002191!3.38e-07!5;CL:0000097!3.38e-07!5;CL:0000831!3.38e-07!5;CL:0002028!3.38e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.06e-23;5!CL:0000163;4.18e-13;9!CL:0000064;9.29e-11;3!CL:0000067;9.29e-11;3!CL:0005012;9.29e-11;3!CL:0002304;9.29e-11;3!CL:0000515;1.78e-10;3!CL:0002603;1.78e-10;3!CL:0000342;1.77e-08;1!CL:0002565;1.77e-08;1!CL:0002566;1.77e-08;1!CL:0000056;4.53e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.75e-23,5;CL:0002028,6.75e-23,5;CL:0000163,7.98e-13,9;CL:0000064,6.16e-11,3;CL:0000067,6.16e-11,3;CL:0005012,6.16e-11,3;CL:0002304,6.16e-11,3;CL:0002603,1.22e-10,3;CL:0002566,8.78e-09,1;CL:0000342,3.53e-08,1;CL:0002565,3.53e-08,1;CL:0000515,5.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.77e-08;1!UBERON:0004874;1.77e-08;1!CL:0000515;4.53e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.77e-08;1!DOID:3603;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.28e-08,1;DOID:3603,3.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!5.81e-07!11;UBERON:0006876!5.81e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;5.84e-17;4!UBERON:0002203;1.73e-11;6!UBERON:0001768;1.73e-11;6!UBERON:0002200;1.73e-11;6!UBERON:0006876;7.05e-11;11!UBERON:0001778;9.29e-11;3!UBERON:0001775;9.29e-11;3!UBERON:0007625;9.95e-11;11!UBERON:0006947;1.78e-10;3!UBERON:0004054;1.78e-10;3!UBERON:0007195;6.48e-09;1!UBERON:0001000;1.77e-08;1!UBERON:0000989;1.77e-08;1!UBERON:0000998;1.77e-08;1!UBERON:0002171;1.77e-08;1!UBERON:0004913;1.77e-08;1!UBERON:0008811;1.77e-08;1!UBERON:0006868;1.77e-08;1!UBERON:0003703;1.77e-08;1!UBERON:0006518;1.77e-08;1!UBERON:0008949;1.77e-08;1!UBERON:0000101;1.77e-08;1!UBERON:0002506;1.77e-08;1!UBERON:0005352;1.77e-08;1!UBERON:0002167;1.77e-08;1!UBERON:0001769;1.77e-08;1!UBERON:0001174;1.77e-08;1!UBERON:0004914;1.77e-08;1!UBERON:0001801;1.86e-08;14!UBERON:0005904;4.53e-08;4!UBERON:0000058;5.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,6.21e-17,4;UBERON:0002203,1.80e-11,6;UBERON:0001768,1.80e-11,6;UBERON:0002200,1.80e-11,6;UBERON:0001778,6.16e-11,3;UBERON:0001775,6.16e-11,3;UBERON:0006876,7.26e-11,11;UBERON:0007625,9.62e-11,11;UBERON:0006947,1.48e-10,3;UBERON:0004054,1.48e-10,3;UBERON:0007195,7.01e-09,1;UBERON:0000989,8.15e-09,1;UBERON:0008811,8.15e-09,1;UBERON:0006258,8.15e-09,1;UBERON:0005876,8.15e-09,1;UBERON:0004874,8.15e-09,1;UBERON:0004913,1.18e-08,1;UBERON:0003703,1.18e-08,1;UBERON:0001174,1.18e-08,1;UBERON:0004914,1.18e-08,1;UBERON:0001000,1.27e-08,1;UBERON:0005352,1.27e-08,1;UBERON:0001801,1.81e-08,14;UBERON:0000998,1.84e-08,1;UBERON:0006868,1.84e-08,1;UBERON:0002171,2.46e-08,1;UBERON:0006518,2.46e-08,1;UBERON:0008949,2.46e-08,1;UBERON:0000101,2.46e-08,1;UBERON:0002167,2.46e-08,1;UBERON:0002506,3.53e-08,1;UBERON:0001769,3.53e-08,1;UBERON:0005904,3.94e-08,4 | |||
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| ||
|short_description=p@chr2:238419927..238419937,+ | |||
}} | }} |
Latest revision as of 08:13, 29 July 2015
Short description: | p@chr2:238419927..238419937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238419927..238419937, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.75e-23 | 5 |
basophil mast progenitor cell | 6.75e-23 | 5 |
endocrine cell | 7.98e-13 | 9 |
ciliated cell | 6.16e-11 | 3 |
ciliated epithelial cell | 6.16e-11 | 3 |
multi-ciliated epithelial cell | 6.16e-11 | 3 |
non-pigmented ciliary epithelial cell | 6.16e-11 | 3 |
astrocyte of the cerebellum | 1.22e-10 | 3 |
dark melanocyte | 8.78e-09 | 1 |
pigment cell (sensu Vertebrata) | 3.53e-08 | 1 |
iris pigment epithelial cell | 3.53e-08 | 1 |
skeletal muscle myoblast | 5.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 6.21e-17 | 4 |
vasculature of eye | 1.80e-11 | 6 |
uvea | 1.80e-11 | 6 |
vasculature of head | 1.80e-11 | 6 |
ciliary epithelium | 6.16e-11 | 3 |
ciliary body | 6.16e-11 | 3 |
vasculature of organ | 7.26e-11 | 11 |
pigment epithelium of eye | 9.62e-11 | 11 |
male genital duct | 1.48e-10 | 3 |
internal male genitalia | 1.48e-10 | 3 |
stroma of bone marrow | 7.01e-09 | 1 |
penis | 8.15e-09 | 1 |
intromittent organ | 8.15e-09 | 1 |
lateral plate mesenchyme | 8.15e-09 | 1 |
undifferentiated genital tubercle | 8.15e-09 | 1 |
somatopleure | 8.15e-09 | 1 |
hepatopancreatic ampulla | 1.18e-08 | 1 |
extrahepatic bile duct | 1.18e-08 | 1 |
common bile duct | 1.18e-08 | 1 |
duodenal papilla | 1.18e-08 | 1 |
vas deferens | 1.27e-08 | 1 |
spermatic cord | 1.27e-08 | 1 |
anterior segment of eyeball | 1.81e-08 | 14 |
seminal vesicle | 1.84e-08 | 1 |
seminal fluid secreting gland | 1.84e-08 | 1 |
lower lobe of right lung | 2.46e-08 | 1 |
right lung lobe | 2.46e-08 | 1 |
lower lobe of lung | 2.46e-08 | 1 |
lobe of lung | 2.46e-08 | 1 |
right lung | 2.46e-08 | 1 |
iris epithelium | 3.53e-08 | 1 |
iris | 3.53e-08 | 1 |
duct of male reproductive system | 3.94e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.28e-08 | 1 |
mucinous cystadenocarcinoma | 3.28e-08 | 1 |