FFCP PHASE1:Hg19::chr2:28785707..28785729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28785707..28785729,+ | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_at_chr2:28785707..28785729,+ | |description=CAGE_peak_at_chr2:28785707..28785729,+ | ||
Latest revision as of 09:22, 29 July 2015
| Short description: | p@chr2:28785707..28785729, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:28785707..28785729, + |
| Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr2:28785707..28785729+ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stratified squamous epithelial cell | 2.34e-35 | 6 |
| keratin accumulating cell | 2.34e-35 | 6 |
| stratified epithelial cell | 2.34e-35 | 6 |
| keratinizing barrier epithelial cell | 2.34e-35 | 6 |
| epithelial fate stem cell | 2.34e-35 | 6 |
| stratified epithelial stem cell | 2.34e-35 | 6 |
| surface ectodermal cell | 2.34e-35 | 6 |
| keratinocyte | 3.68e-24 | 5 |
| gingival epithelial cell | 1.77e-18 | 3 |
| general ecto-epithelial cell | 2.78e-15 | 14 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelium | 1.77e-18 | 3 |
| mouth mucosa | 1.75e-16 | 13 |
| mammary gland | 2.41e-14 | 4 |
| mammary bud | 2.41e-14 | 4 |
| mammary ridge | 2.41e-14 | 4 |
| mammary placode | 2.41e-14 | 4 |
| mucosa | 8.08e-11 | 20 |
| skin epidermis | 1.82e-08 | 15 |
| outer epithelium | 1.82e-08 | 15 |
| enveloping layer of ectoderm | 1.82e-08 | 15 |
Showing 1 to 10 of 16 entries
