FFCP PHASE1:Hg19::chr2:43370151..43370192,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43370151..43370192,- | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_at_chr2:43370151..43370192,- | |description=CAGE_peak_at_chr2:43370151..43370192,- | ||
|id=chr2:43370151..43370192,- | |id=chr2:43370151..43370192,- | ||
|ontology_enrichment_celltype=CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0000084;1.15e-21;25!CL:0000791;2.64e-17;18!CL:0000789;2.64e-17;18!CL:0002419;2.64e-17;18!CL:0000625;5.10e-13;11!CL:0000542;6.09e-07;53 | |ontology_enrichment_celltype=CL:0000625!3.82e-36!11;CL:0000791!4.44e-31!18;CL:0000789!4.44e-31!18;CL:0002420!4.44e-31!18;CL:0002419!4.44e-31!18;CL:0000790!4.44e-31!18;CL:0000084!1.36e-25!25;CL:0000827!1.36e-25!25;CL:0000838!2.39e-21!52;CL:0000542!7.33e-21!53;CL:0000051!7.33e-21!53;CL:0002087!5.34e-15!119;CL:0000738!4.37e-13!140;CL:0000623!5.98e-13!3;CL:0000825!5.98e-13!3;CL:0000842!3.18e-12!3;CL:0002031!1.89e-10!124;CL:0000893!1.01e-09!2;CL:0002489!1.01e-09!2;CL:0000809!1.01e-09!2;CL:0000808!1.01e-09!2;CL:0000894!1.01e-09!2;CL:0000806!1.01e-09!2;CL:0000807!1.01e-09!2;CL:0000805!1.01e-09!2;CL:0002425!1.01e-09!2;CL:0000037!1.53e-09!172;CL:0000566!1.53e-09!172;CL:0000224!2.76e-09!4;CL:0000988!1.07e-08!182;CL:0002032!1.84e-07!165;CL:0000837!1.84e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0000084;1.15e-21;25!CL:0000791;2.64e-17;18!CL:0000789;2.64e-17;18!CL:0002419;2.64e-17;18!CL:0000625;5.10e-13;11!CL:0000542;6.09e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-34,1;CL:0000914,1.84e-34,1;CL:0000911,1.84e-34,1;CL:0000814,1.84e-34,1;CL:0002042,1.84e-34,1;CL:0002039,1.84e-34,1;CL:0002040,1.84e-34,1;CL:0002041,1.84e-34,1;CL:0000084,1.09e-21,25;CL:0000827,1.09e-21,25;CL:0000893,5.48e-18,2;CL:0002489,5.48e-18,2;CL:0000809,5.48e-18,2;CL:0000808,5.48e-18,2;CL:0000894,5.48e-18,2;CL:0000806,5.48e-18,2;CL:0000807,5.48e-18,2;CL:0000805,5.48e-18,2;CL:0002425,5.48e-18,2;CL:0000791,2.64e-17,18;CL:0000789,2.64e-17,18;CL:0002420,2.64e-17,18;CL:0002419,2.64e-17,18;CL:0000790,2.64e-17,18;CL:0000625,5.10e-13,11;CL:0000838,9.34e-11,52;CL:0000542,1.45e-10,53;CL:0000051,1.45e-10,53 | |||
|ontology_enrichment_development_v019=CL:0002425;5.48e-18;2!CL:0000790;2.64e-17;18!CL:0000051;6.09e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;8.46e-10;15!UBERON:0000179;8.46e-10;15!UBERON:0000463;8.46e-10;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.17e-16!15;UBERON:0000179!3.17e-16!15;UBERON:0000463!3.17e-16!15;UBERON:0002370!2.23e-10!4;UBERON:0005058!2.23e-10!4;UBERON:0009113!2.23e-10!4;UBERON:0003295!2.23e-10!4;UBERON:0005562!2.23e-10!4;UBERON:0004177!7.23e-10!7;UBERON:0003351!4.88e-07!6;UBERON:0001042!8.75e-07!10;UBERON:0009145!8.75e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.46e-10;15!UBERON:0000179;8.46e-10;15!UBERON:0000463;8.46e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.85e-10,15;UBERON:0000179,8.85e-10,15;UBERON:0000463,8.85e-10,15;UBERON:0002370,1.12e-09,4;UBERON:0005058,1.12e-09,4;UBERON:0009113,1.12e-09,4;UBERON:0003295,1.12e-09,4;UBERON:0005562,1.12e-09,4;UBERON:0003351,7.17e-07,6 | |||
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|short_description=p@chr2:43370151..43370192,- | |short_description=p@chr2:43370151..43370192,- | ||
}} | }} |
Latest revision as of 10:14, 29 July 2015
Short description: | p@chr2:43370151..43370192, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43370151..43370192, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.84e-34 | 1 |
immature NK T cell | 1.84e-34 | 1 |
effector T cell | 1.84e-34 | 1 |
mature NK T cell | 1.84e-34 | 1 |
immature NK T cell stage IV | 1.84e-34 | 1 |
immature NK T cell stage I | 1.84e-34 | 1 |
immature NK T cell stage II | 1.84e-34 | 1 |
immature NK T cell stage III | 1.84e-34 | 1 |
T cell | 1.09e-21 | 25 |
pro-T cell | 1.09e-21 | 25 |
thymocyte | 5.48e-18 | 2 |
double negative thymocyte | 5.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 5.48e-18 | 2 |
DN4 thymocyte | 5.48e-18 | 2 |
DN1 thymic pro-T cell | 5.48e-18 | 2 |
DN2 thymocyte | 5.48e-18 | 2 |
DN3 thymocyte | 5.48e-18 | 2 |
immature single positive thymocyte | 5.48e-18 | 2 |
early T lineage precursor | 5.48e-18 | 2 |
mature alpha-beta T cell | 2.64e-17 | 18 |
alpha-beta T cell | 2.64e-17 | 18 |
immature T cell | 2.64e-17 | 18 |
mature T cell | 2.64e-17 | 18 |
immature alpha-beta T cell | 2.64e-17 | 18 |
CD8-positive, alpha-beta T cell | 5.10e-13 | 11 |
lymphoid lineage restricted progenitor cell | 9.34e-11 | 52 |
lymphocyte | 1.45e-10 | 53 |
common lymphoid progenitor | 1.45e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 8.85e-10 | 15 |
haemolymphatic fluid | 8.85e-10 | 15 |
organism substance | 8.85e-10 | 15 |
thymus | 1.12e-09 | 4 |
hemolymphoid system gland | 1.12e-09 | 4 |
thymic region | 1.12e-09 | 4 |
pharyngeal gland | 1.12e-09 | 4 |
thymus primordium | 1.12e-09 | 4 |
pharyngeal epithelium | 7.17e-07 | 6 |