FFCP PHASE1:Hg19::chr2:56098185..56098199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56098185..56098199,- | |||
|coexpression_cluster_id=C395 | |coexpression_cluster_id=C395 | ||
|description=CAGE_peak_at_chr2:56098185..56098199,- | |description=CAGE_peak_at_chr2:56098185..56098199,- | ||
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|ontology_enrichment_celltype=CL:0000222!4.22e-21!119;CL:0000213!1.06e-15!57;CL:0000215!1.06e-15!57;CL:0002139!1.52e-14!24;CL:0002078!1.49e-11!44;CL:0000055!2.94e-11!180;CL:0000115!3.02e-11!35;CL:0000220!5.54e-11!246;CL:0002321!1.25e-10!248;CL:0000057!1.61e-10!75;CL:0000071!6.17e-10!18;CL:0002546!6.17e-10!18;CL:0002494!6.40e-09!16;CL:0000187!6.80e-09!54;CL:0000076!3.86e-08!62;CL:0000680!8.07e-08!57;CL:0000056!8.07e-08!57;CL:0000355!8.07e-08!57;CL:0000183!1.23e-07!59;CL:0000359!1.43e-07!32;CL:1000413!4.21e-07!9;CL:0000393!7.02e-07!60;CL:0000211!7.02e-07!60 | |ontology_enrichment_celltype=CL:0000222!4.22e-21!119;CL:0000213!1.06e-15!57;CL:0000215!1.06e-15!57;CL:0002139!1.52e-14!24;CL:0002078!1.49e-11!44;CL:0000055!2.94e-11!180;CL:0000115!3.02e-11!35;CL:0000220!5.54e-11!246;CL:0002321!1.25e-10!248;CL:0000057!1.61e-10!75;CL:0000071!6.17e-10!18;CL:0002546!6.17e-10!18;CL:0002494!6.40e-09!16;CL:0000187!6.80e-09!54;CL:0000076!3.86e-08!62;CL:0000680!8.07e-08!57;CL:0000056!8.07e-08!57;CL:0000355!8.07e-08!57;CL:0000183!1.23e-07!59;CL:0000359!1.43e-07!32;CL:1000413!4.21e-07!9;CL:0000393!7.02e-07!60;CL:0000211!7.02e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.94e-21;24!CL:0000115;2.00e-13;36!CL:0002494;9.87e-13;16!CL:0000071;1.11e-12;18!CL:0002078;1.68e-12;45!CL:0002138;2.04e-11;6!CL:0000213;9.87e-11;58!CL:0000215;9.87e-11;58!CL:0002548;1.53e-09;6!CL:1000306;8.57e-08;4!CL:0002547;8.57e-08;4!CL:0000153;9.47e-08;9!CL:0000447;9.47e-08;9!CL:0000135;3.33e-07;3!CL:0000388;3.33e-07;3!CL:1000413;3.58e-07;9!CL:0000359;4.47e-07;32!CL:0002144;4.97e-07;3!CL:0002334;5.64e-07;12!CL:0002620;5.82e-07;23 | |ontology_enrichment_celltype_v019=CL:0002139;1.94e-21;24!CL:0000115;2.00e-13;36!CL:0002494;9.87e-13;16!CL:0000071;1.11e-12;18!CL:0002078;1.68e-12;45!CL:0002138;2.04e-11;6!CL:0000213;9.87e-11;58!CL:0000215;9.87e-11;58!CL:0002548;1.53e-09;6!CL:1000306;8.57e-08;4!CL:0002547;8.57e-08;4!CL:0000153;9.47e-08;9!CL:0000447;9.47e-08;9!CL:0000135;3.33e-07;3!CL:0000388;3.33e-07;3!CL:1000413;3.58e-07;9!CL:0000359;4.47e-07;32!CL:0002144;4.97e-07;3!CL:0002334;5.64e-07;12!CL:0002620;5.82e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.48e-21,24;CL:0000222,2.53e-21,121;CL:0000213,2.18e-19,58;CL:0000215,2.18e-19,58;CL:0000057,8.66e-18,76;CL:0002078,2.32e-16,45;CL:0000115,5.01e-16,36;CL:0002494,9.45e-13,16;CL:0000071,1.21e-12,18;CL:0002546,1.21e-12,18;CL:0005020,1.21e-11,6;CL:0002138,1.21e-11,6;CL:0005022,1.21e-11,6;CL:0002548,7.70e-10,6;CL:0000153,7.52e-08,9;CL:0000447,7.52e-08,9;CL:0002321,8.64e-08,250;CL:1000306,1.54e-07,4;CL:0002547,1.54e-07,4;CL:0000359,1.88e-07,32;CL:0000048,2.17e-07,427;CL:0000135,3.46e-07,3;CL:0000388,3.46e-07,3;CL:1000413,3.53e-07,9;CL:0002334,4.26e-07,12;CL:0002144,4.46e-07,3;CL:0002620,4.87e-07,23;CL:0000723,4.92e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-12;18!CL:0005022;2.04e-11;6 | |ontology_enrichment_development_v019=CL:0002546;1.11e-12;18!CL:0005022;2.04e-11;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.14e-09;5!DOID:450;8.14e-09;5!DOID:66;8.14e-09;5!DOID:423;8.14e-09;5!DOID:0080000;8.14e-09;5!DOID:11722;8.14e-09;5 | |ontology_enrichment_disease_v019=DOID:17;8.14e-09;5!DOID:450;8.14e-09;5!DOID:66;8.14e-09;5!DOID:423;8.14e-09;5!DOID:0080000;8.14e-09;5!DOID:11722;8.14e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.02e-09,5;DOID:450,5.02e-09,5;DOID:66,5.02e-09,5;DOID:423,5.02e-09,5;DOID:0080000,5.02e-09,5;DOID:11722,5.02e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.01e-22!84;UBERON:0002049!2.02e-21!79;UBERON:0007798!2.02e-21!79;UBERON:0000055!9.10e-21!69;UBERON:0004535!1.84e-19!110;UBERON:0001009!6.65e-19!113;UBERON:0001981!1.91e-18!60;UBERON:0007500!1.91e-18!60;UBERON:0004537!1.91e-18!60;UBERON:0006965!1.91e-18!60;UBERON:0003914!9.91e-16!118;UBERON:0001637!2.64e-15!42;UBERON:0003509!2.64e-15!42;UBERON:0004572!2.64e-15!42;UBERON:0000477!1.53e-14!286;UBERON:0004111!2.54e-12!241;UBERON:0000483!6.30e-12!309;UBERON:0004573!9.51e-12!33;UBERON:0004571!9.51e-12!33;UBERON:0000119!1.06e-11!312;UBERON:0000490!1.33e-11!138;UBERON:0000468!2.72e-10!659;UBERON:0006914!3.19e-10!25;UBERON:0001986!6.17e-10!18;UBERON:0004638!6.17e-10!18;UBERON:0004852!6.17e-10!18;UBERON:0000487!2.19e-09!22;UBERON:0000025!1.04e-08!194;UBERON:0000947!4.08e-08!21;UBERON:0010191!4.08e-08!21;UBERON:0000475!6.63e-08!365;UBERON:0000467!9.96e-08!625;UBERON:0000480!1.29e-07!626;UBERON:0001134!1.32e-07!61;UBERON:0002036!1.32e-07!61;UBERON:0003082!1.32e-07!61;UBERON:0003915!4.21e-07!9;UBERON:0004700!4.21e-07!9;UBERON:0001917!4.21e-07!9;UBERON:0000948!4.64e-07!24;UBERON:0005498!4.64e-07!24;UBERON:0004140!4.64e-07!24;UBERON:0009881!4.64e-07!24;UBERON:0004141!4.64e-07!24;UBERON:0003084!4.64e-07!24;UBERON:0007005!4.64e-07!24;UBERON:0004139!4.64e-07!24;UBERON:0004291!4.64e-07!24;UBERON:0002385!5.25e-07!63;UBERON:0001015!5.25e-07!63;UBERON:0000383!5.25e-07!63 | |ontology_enrichment_uberon=UBERON:0004872!5.01e-22!84;UBERON:0002049!2.02e-21!79;UBERON:0007798!2.02e-21!79;UBERON:0000055!9.10e-21!69;UBERON:0004535!1.84e-19!110;UBERON:0001009!6.65e-19!113;UBERON:0001981!1.91e-18!60;UBERON:0007500!1.91e-18!60;UBERON:0004537!1.91e-18!60;UBERON:0006965!1.91e-18!60;UBERON:0003914!9.91e-16!118;UBERON:0001637!2.64e-15!42;UBERON:0003509!2.64e-15!42;UBERON:0004572!2.64e-15!42;UBERON:0000477!1.53e-14!286;UBERON:0004111!2.54e-12!241;UBERON:0000483!6.30e-12!309;UBERON:0004573!9.51e-12!33;UBERON:0004571!9.51e-12!33;UBERON:0000119!1.06e-11!312;UBERON:0000490!1.33e-11!138;UBERON:0000468!2.72e-10!659;UBERON:0006914!3.19e-10!25;UBERON:0001986!6.17e-10!18;UBERON:0004638!6.17e-10!18;UBERON:0004852!6.17e-10!18;UBERON:0000487!2.19e-09!22;UBERON:0000025!1.04e-08!194;UBERON:0000947!4.08e-08!21;UBERON:0010191!4.08e-08!21;UBERON:0000475!6.63e-08!365;UBERON:0000467!9.96e-08!625;UBERON:0000480!1.29e-07!626;UBERON:0001134!1.32e-07!61;UBERON:0002036!1.32e-07!61;UBERON:0003082!1.32e-07!61;UBERON:0003915!4.21e-07!9;UBERON:0004700!4.21e-07!9;UBERON:0001917!4.21e-07!9;UBERON:0000948!4.64e-07!24;UBERON:0005498!4.64e-07!24;UBERON:0004140!4.64e-07!24;UBERON:0009881!4.64e-07!24;UBERON:0004141!4.64e-07!24;UBERON:0003084!4.64e-07!24;UBERON:0007005!4.64e-07!24;UBERON:0004139!4.64e-07!24;UBERON:0004291!4.64e-07!24;UBERON:0002385!5.25e-07!63;UBERON:0001015!5.25e-07!63;UBERON:0000383!5.25e-07!63 | ||
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| ||
|short_description=p@chr2:56098185..56098199,- | |short_description=p@chr2:56098185..56098199,- | ||
}} | }} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56098185..56098199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56098185..56098199, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.48e-21 | 24 |
mesodermal cell | 2.53e-21 | 121 |
lining cell | 2.18e-19 | 58 |
barrier cell | 2.18e-19 | 58 |
fibroblast | 8.66e-18 | 76 |
meso-epithelial cell | 2.32e-16 | 45 |
endothelial cell | 5.01e-16 | 36 |
cardiocyte | 9.45e-13 | 16 |
blood vessel endothelial cell | 1.21e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-12 | 18 |
lymphangioblast | 1.21e-11 | 6 |
endothelial cell of lymphatic vessel | 1.21e-11 | 6 |
vascular lymphangioblast | 1.21e-11 | 6 |
cardiac fibroblast | 7.70e-10 | 6 |
GAG secreting cell | 7.52e-08 | 9 |
carbohydrate secreting cell | 7.52e-08 | 9 |
embryonic cell | 8.64e-08 | 250 |
fibroblast of tunica adventitia of artery | 1.54e-07 | 4 |
fibroblast of the aortic adventitia | 1.54e-07 | 4 |
vascular associated smooth muscle cell | 1.88e-07 | 32 |
multi fate stem cell | 2.17e-07 | 427 |
fibrocyte | 3.46e-07 | 3 |
tendon cell | 3.46e-07 | 3 |
endothelial cell of artery | 3.53e-07 | 9 |
preadipocyte | 4.26e-07 | 12 |
capillary endothelial cell | 4.46e-07 | 3 |
skin fibroblast | 4.87e-07 | 23 |
somatic stem cell | 4.92e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.02e-09 | 5 |
myotonic disease | 5.02e-09 | 5 |
muscle tissue disease | 5.02e-09 | 5 |
myopathy | 5.02e-09 | 5 |
muscular disease | 5.02e-09 | 5 |
myotonic dystrophy | 5.02e-09 | 5 |