FFCP PHASE1:Hg19::chr2:56098185..56098199,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:56098185..56098199,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56098185..56098199,- | |||
|id=chr2:56098185..56098199,- | |||
|ontology_enrichment_celltype=CL:0000222!4.22e-21!119;CL:0000213!1.06e-15!57;CL:0000215!1.06e-15!57;CL:0002139!1.52e-14!24;CL:0002078!1.49e-11!44;CL:0000055!2.94e-11!180;CL:0000115!3.02e-11!35;CL:0000220!5.54e-11!246;CL:0002321!1.25e-10!248;CL:0000057!1.61e-10!75;CL:0000071!6.17e-10!18;CL:0002546!6.17e-10!18;CL:0002494!6.40e-09!16;CL:0000187!6.80e-09!54;CL:0000076!3.86e-08!62;CL:0000680!8.07e-08!57;CL:0000056!8.07e-08!57;CL:0000355!8.07e-08!57;CL:0000183!1.23e-07!59;CL:0000359!1.43e-07!32;CL:1000413!4.21e-07!9;CL:0000393!7.02e-07!60;CL:0000211!7.02e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.94e-21;24!CL:0000115;2.00e-13;36!CL:0002494;9.87e-13;16!CL:0000071;1.11e-12;18!CL:0002078;1.68e-12;45!CL:0002138;2.04e-11;6!CL:0000213;9.87e-11;58!CL:0000215;9.87e-11;58!CL:0002548;1.53e-09;6!CL:1000306;8.57e-08;4!CL:0002547;8.57e-08;4!CL:0000153;9.47e-08;9!CL:0000447;9.47e-08;9!CL:0000135;3.33e-07;3!CL:0000388;3.33e-07;3!CL:1000413;3.58e-07;9!CL:0000359;4.47e-07;32!CL:0002144;4.97e-07;3!CL:0002334;5.64e-07;12!CL:0002620;5.82e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.48e-21,24;CL:0000222,2.53e-21,121;CL:0000213,2.18e-19,58;CL:0000215,2.18e-19,58;CL:0000057,8.66e-18,76;CL:0002078,2.32e-16,45;CL:0000115,5.01e-16,36;CL:0002494,9.45e-13,16;CL:0000071,1.21e-12,18;CL:0002546,1.21e-12,18;CL:0005020,1.21e-11,6;CL:0002138,1.21e-11,6;CL:0005022,1.21e-11,6;CL:0002548,7.70e-10,6;CL:0000153,7.52e-08,9;CL:0000447,7.52e-08,9;CL:0002321,8.64e-08,250;CL:1000306,1.54e-07,4;CL:0002547,1.54e-07,4;CL:0000359,1.88e-07,32;CL:0000048,2.17e-07,427;CL:0000135,3.46e-07,3;CL:0000388,3.46e-07,3;CL:1000413,3.53e-07,9;CL:0002334,4.26e-07,12;CL:0002144,4.46e-07,3;CL:0002620,4.87e-07,23;CL:0000723,4.92e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-12;18!CL:0005022;2.04e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.14e-09;5!DOID:450;8.14e-09;5!DOID:66;8.14e-09;5!DOID:423;8.14e-09;5!DOID:0080000;8.14e-09;5!DOID:11722;8.14e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.02e-09,5;DOID:450,5.02e-09,5;DOID:66,5.02e-09,5;DOID:423,5.02e-09,5;DOID:0080000,5.02e-09,5;DOID:11722,5.02e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.01e-22!84;UBERON:0002049!2.02e-21!79;UBERON:0007798!2.02e-21!79;UBERON:0000055!9.10e-21!69;UBERON:0004535!1.84e-19!110;UBERON:0001009!6.65e-19!113;UBERON:0001981!1.91e-18!60;UBERON:0007500!1.91e-18!60;UBERON:0004537!1.91e-18!60;UBERON:0006965!1.91e-18!60;UBERON:0003914!9.91e-16!118;UBERON:0001637!2.64e-15!42;UBERON:0003509!2.64e-15!42;UBERON:0004572!2.64e-15!42;UBERON:0000477!1.53e-14!286;UBERON:0004111!2.54e-12!241;UBERON:0000483!6.30e-12!309;UBERON:0004573!9.51e-12!33;UBERON:0004571!9.51e-12!33;UBERON:0000119!1.06e-11!312;UBERON:0000490!1.33e-11!138;UBERON:0000468!2.72e-10!659;UBERON:0006914!3.19e-10!25;UBERON:0001986!6.17e-10!18;UBERON:0004638!6.17e-10!18;UBERON:0004852!6.17e-10!18;UBERON:0000487!2.19e-09!22;UBERON:0000025!1.04e-08!194;UBERON:0000947!4.08e-08!21;UBERON:0010191!4.08e-08!21;UBERON:0000475!6.63e-08!365;UBERON:0000467!9.96e-08!625;UBERON:0000480!1.29e-07!626;UBERON:0001134!1.32e-07!61;UBERON:0002036!1.32e-07!61;UBERON:0003082!1.32e-07!61;UBERON:0003915!4.21e-07!9;UBERON:0004700!4.21e-07!9;UBERON:0001917!4.21e-07!9;UBERON:0000948!4.64e-07!24;UBERON:0005498!4.64e-07!24;UBERON:0004140!4.64e-07!24;UBERON:0009881!4.64e-07!24;UBERON:0004141!4.64e-07!24;UBERON:0003084!4.64e-07!24;UBERON:0007005!4.64e-07!24;UBERON:0004139!4.64e-07!24;UBERON:0004291!4.64e-07!24;UBERON:0002385!5.25e-07!63;UBERON:0001015!5.25e-07!63;UBERON:0000383!5.25e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;1.96e-15;65!UBERON:0001637;5.54e-14;42!UBERON:0003509;5.54e-14;42!UBERON:0004572;5.54e-14;42!UBERON:0006914;5.62e-14;25!UBERON:0004573;6.23e-14;33!UBERON:0004571;6.23e-14;33!UBERON:0004457;5.81e-13;9!UBERON:0000042;5.81e-13;9!UBERON:0007500;7.23e-13;56!UBERON:0001981;7.23e-13;56!UBERON:0004537;7.23e-13;56!UBERON:0004638;1.11e-12;18!UBERON:0001986;1.11e-12;18!UBERON:0004852;1.11e-12;18!UBERON:0002049;7.80e-12;75!UBERON:0007798;7.80e-12;75!UBERON:0000487;8.64e-12;22!UBERON:0003688;5.09e-11;6!UBERON:0002358;5.09e-11;6!UBERON:0003684;5.09e-11;6!UBERON:0001178;5.09e-11;6!UBERON:0000947;6.89e-10;21!UBERON:0010191;6.89e-10;21!UBERON:0000490;1.17e-08;33!UBERON:0000948;1.73e-08;22!UBERON:0001473;2.57e-08;8!UBERON:0004536;2.57e-08;8!UBERON:0006558;2.57e-08;8!UBERON:0004797;8.57e-08;4!UBERON:0000415;8.57e-08;4!UBERON:0007240;8.57e-08;4!UBERON:0005742;8.57e-08;4!UBERON:0005734;8.57e-08;4!UBERON:0004664;8.57e-08;4!UBERON:0004663;8.57e-08;4!UBERON:0003914;1.53e-07;74!UBERON:0007846;3.33e-07;3!UBERON:0000043;3.33e-07;3!UBERON:0007845;3.33e-07;3!UBERON:0004535;3.39e-07;109!UBERON:0003915;3.58e-07;9!UBERON:0004700;3.58e-07;9!UBERON:0001917;3.58e-07;9!UBERON:0007100;3.78e-07;25!UBERON:0010523;4.97e-07;3!UBERON:0001915;4.97e-07;3!UBERON:0001982;4.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.73e-27,83;UBERON:0000055,3.08e-26,68;UBERON:0004535,9.91e-26,109;UBERON:0001009,1.19e-24,112;UBERON:0002049,6.72e-23,78;UBERON:0007798,6.72e-23,78;UBERON:0003914,3.59e-21,117;UBERON:0007500,1.70e-20,59;UBERON:0001981,1.70e-20,59;UBERON:0004537,1.70e-20,59;UBERON:0006965,1.70e-20,59;UBERON:0001637,4.88e-18,42;UBERON:0003509,4.88e-18,42;UBERON:0004572,4.88e-18,42;UBERON:0004573,1.56e-14,33;UBERON:0004571,1.56e-14,33;UBERON:0006914,6.11e-14,25;UBERON:0004638,1.21e-12,18;UBERON:0001986,1.21e-12,18;UBERON:0004852,1.21e-12,18;UBERON:0000487,9.39e-12,22;UBERON:0003688,6.99e-11,6;UBERON:0002358,6.99e-11,6;UBERON:0003684,6.99e-11,6;UBERON:0001178,6.99e-11,6;UBERON:0000948,1.31e-10,24;UBERON:0005498,1.31e-10,24;UBERON:0004140,1.31e-10,24;UBERON:0009881,1.31e-10,24;UBERON:0004141,1.31e-10,24;UBERON:0003084,1.31e-10,24;UBERON:0007005,1.31e-10,24;UBERON:0004139,1.31e-10,24;UBERON:0004291,1.31e-10,24;UBERON:0004111,3.60e-10,240;UBERON:0000947,8.86e-10,21;UBERON:0010191,8.86e-10,21;UBERON:0000025,1.31e-09,192;UBERON:0004457,3.43e-09,12;UBERON:0000042,3.43e-09,12;UBERON:0007100,4.74e-09,27;UBERON:0001473,1.76e-08,8;UBERON:0004536,1.76e-08,8;UBERON:0006558,1.76e-08,8;UBERON:0000415,1.54e-07,4;UBERON:0007240,1.54e-07,4;UBERON:0005742,1.54e-07,4;UBERON:0005734,1.54e-07,4;UBERON:0004664,1.54e-07,4;UBERON:0004663,1.54e-07,4;UBERON:0000490,1.66e-07,148;UBERON:0003081,1.94e-07,203;UBERON:0007846,3.46e-07,3;UBERON:0000043,3.46e-07,3;UBERON:0007845,3.46e-07,3;UBERON:0003915,3.53e-07,9;UBERON:0004700,3.53e-07,9;UBERON:0001917,3.53e-07,9;UBERON:0010523,4.46e-07,3;UBERON:0001915,4.46e-07,3;UBERON:0001982,4.46e-07,3 | |||
|phase1_expression=2.90685406832891,5.99481466894753,4.22863212287913,1.0007329835313,2.68176656656373,10.4680622892044,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,2.01697543935533,2.41077811209591,0,2.43966399395253,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,2.17366355134002,6.50590474292219,5.0133791063589,11.7325680358267,0,1.94653948121054,0.189069634328136,0.665188192387692,0.527008714158756,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.694281003215189,0.56530794192401,2.09749718104953,6.60283300656162,3.13492449805216,1.8089173141853,2.84613010149368,5.02080919147005,4.83395180530976,7.60272105718513,6.83373761134875,4.04429388380456,5.67099363517232,4.01848777278359,1.57170560838319,0.900891843866578,0,0,1.09921046358244,0,0,0,1.49091585508596,6.07826455989983,1.19168262731897,13.1944845544454,1.06400514659507,2.80338800071154,1.06748995729705,1.72667283892012,1.8672662123986,2.2900814251847,1.79808093424805,0.908144565869588,0,0.234321431833797,0,1.1409436430889,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.45071417671979,1.70148274740032,1.79389635688862,3.84403299873421,3.39091041855299,2.40072876867522,1.64884046781502,0,0.744467425326359,0.337552664482532,0.876933046450788,2.52433774244115,1.74894807420369,5.81925804547723,4.26011511019937,1.10827308050404,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.469634776943287,4.90845922387651,5.09284063834272,7.99067439385313,0,0,0,0,0,0,0.503946384596579,0,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,2.7165818795048,0.542621605391443,0,0,1.42156779497018,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,1.24782516918484,1.07057393278297,0.946214490203608,0.702848489956279,0,0,1.03473071292505,0,0,0.955719759148911,0,0,0,0,0,0,0,0.30239029332968,2.48107807818777,1.84154367945675,6.17452207752762,3.45975702990393,4.60536524160033,4.18220194973379,5.93672265779964,0,0.355123450626254,0,0,0,0,0.40101294060657,0.184161977871793,0.918515585316854,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0.170093705276516,3.23873874153209,3.08454505380579,0,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0.309123034943167,0,0,0,0,6.42735719376638,0,0.924291702687866,0.767518373630648,0.137836572484531,0.537101224341368,0.870100163485371,0.255679882248303,0.178064071293475,0.495854746082934,0.384380134730212,0.510450849978337,0.10115778085555,0.464845549297286,2.20368642781448,0,1.54016790088044,0,0,0.18532421910392,1.5743737541619,0,0.316379424718726,2.2875623270859,0,0.855877976067841,1.27281299170375,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0.202182481573316,0,1.26377536871694,0,2.43713489631284,4.22600587027022,0,1.41405431953713,2.26016233240486,0,1.99031692572366,4.38450885253763,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0.143411352204052,0.294747123039363,0,0,9.92205885899021,25.6850016508723,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0.994147647766298,0.140669416410513,0.890469640183247,0,0,0.597743964753209,0,0,0.613612095012929,0,0.933118762985422,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.219385397153973,0,0.697118721393016,0.0769502585037971,1.48124672601102,0,0,0,0.957003479195758,0,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.873633341210151,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,1.09633539717401,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0.136905378891993,0,1.71906176567983,0,0.837847203816763,0,0,0.399358000997982,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,2.15144807199414,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0.306345576763462,0,0,0.8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| |||
|short_description=p@chr2:56098185..56098199,- | |||
}} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56098185..56098199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56098185..56098199, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.48e-21 | 24 |
mesodermal cell | 2.53e-21 | 121 |
lining cell | 2.18e-19 | 58 |
barrier cell | 2.18e-19 | 58 |
fibroblast | 8.66e-18 | 76 |
meso-epithelial cell | 2.32e-16 | 45 |
endothelial cell | 5.01e-16 | 36 |
cardiocyte | 9.45e-13 | 16 |
blood vessel endothelial cell | 1.21e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-12 | 18 |
lymphangioblast | 1.21e-11 | 6 |
endothelial cell of lymphatic vessel | 1.21e-11 | 6 |
vascular lymphangioblast | 1.21e-11 | 6 |
cardiac fibroblast | 7.70e-10 | 6 |
GAG secreting cell | 7.52e-08 | 9 |
carbohydrate secreting cell | 7.52e-08 | 9 |
embryonic cell | 8.64e-08 | 250 |
fibroblast of tunica adventitia of artery | 1.54e-07 | 4 |
fibroblast of the aortic adventitia | 1.54e-07 | 4 |
vascular associated smooth muscle cell | 1.88e-07 | 32 |
multi fate stem cell | 2.17e-07 | 427 |
fibrocyte | 3.46e-07 | 3 |
tendon cell | 3.46e-07 | 3 |
endothelial cell of artery | 3.53e-07 | 9 |
preadipocyte | 4.26e-07 | 12 |
capillary endothelial cell | 4.46e-07 | 3 |
skin fibroblast | 4.87e-07 | 23 |
somatic stem cell | 4.92e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.02e-09 | 5 |
myotonic disease | 5.02e-09 | 5 |
muscle tissue disease | 5.02e-09 | 5 |
myopathy | 5.02e-09 | 5 |
muscular disease | 5.02e-09 | 5 |
myotonic dystrophy | 5.02e-09 | 5 |