FFCP PHASE1:Hg19::chr2:56103806..56103824,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:56103806..56103824,-
|short_description=p@chr2:56103806..56103824,-
|description=CAGE_peak_at_chr2:56103806..56103824,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:56103806..56103824,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56103806..56103824,- | |||
|id=chr2:56103806..56103824,- | |||
|ontology_enrichment_celltype=CL:0000213!3.53e-16!57;CL:0000215!3.53e-16!57;CL:0000222!1.70e-15!119;CL:0002139!1.74e-15!24;CL:0002078!9.35e-12!44;CL:0000115!3.53e-11!35;CL:0000071!9.63e-10!18;CL:0002546!9.63e-10!18;CL:0000057!6.79e-09!75;CL:0000220!2.02e-08!246;CL:0002321!3.42e-08!248;CL:0005020!7.42e-08!6;CL:0002138!7.42e-08!6;CL:0005022!7.42e-08!6;CL:0000055!7.80e-08!180;CL:1000413!1.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000135;7.27e-17;3!CL:0000388;7.27e-17;3!CL:0002138;8.02e-15;6!CL:0002078;2.19e-13;45!CL:0000153;2.05e-10;9!CL:0000447;2.05e-10;9!CL:0002139;3.01e-10;24!CL:0000115;3.25e-09;36!CL:0000213;4.60e-09;58!CL:0000215;4.60e-09;58!CL:0000499;6.48e-09;28!CL:0000214;9.15e-09;3!CL:0002616;3.61e-07;1!CL:0002591;5.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.12e-17,3;CL:0000388,3.12e-17,3;CL:0000213,8.10e-16,58;CL:0000215,8.10e-16,58;CL:0002078,2.35e-15,45;CL:0005020,8.97e-15,6;CL:0002138,8.97e-15,6;CL:0005022,8.97e-15,6;CL:0000115,6.20e-11,36;CL:0000222,7.12e-11,121;CL:0000153,2.08e-10,9;CL:0000447,2.08e-10,9;CL:0002139,2.59e-10,24;CL:0000499,5.37e-09,28;CL:0000214,8.67e-09,3;CL:0002616,3.52e-07,1;CL:0002591,6.24e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;8.02e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.87e-19!84;UBERON:0000055!1.06e-18!69;UBERON:0002049!2.09e-17!79;UBERON:0007798!2.09e-17!79;UBERON:0004535!2.01e-16!110;UBERON:0001009!1.62e-15!113;UBERON:0001981!2.35e-15!60;UBERON:0007500!2.35e-15!60;UBERON:0004537!2.35e-15!60;UBERON:0006965!2.35e-15!60;UBERON:0003914!1.24e-13!118;UBERON:0001637!1.34e-11!42;UBERON:0003509!1.34e-11!42;UBERON:0004572!1.34e-11!42;UBERON:0006914!9.69e-11!25;UBERON:0001986!9.63e-10!18;UBERON:0004638!9.63e-10!18;UBERON:0004852!9.63e-10!18;UBERON:0000477!3.60e-09!286;UBERON:0000947!4.40e-09!21;UBERON:0010191!4.40e-09!21;UBERON:0004573!1.53e-08!33;UBERON:0004571!1.53e-08!33;UBERON:0000487!2.52e-08!22;UBERON:0004111!3.32e-08!241;UBERON:0000490!4.01e-08!138;UBERON:0003915!1.80e-07!9;UBERON:0004700!1.80e-07!9;UBERON:0001917!1.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.27e-17;3!UBERON:0000043;7.27e-17;3!UBERON:0007845;7.27e-17;3!UBERON:0001473;3.76e-11;8!UBERON:0004536;3.76e-11;8!UBERON:0006558;3.76e-11;8!UBERON:0002465;6.11e-09;10!UBERON:0006915;9.15e-09;3!UBERON:0007616;9.15e-09;3!UBERON:0002217;9.15e-09;3!UBERON:0002018;9.15e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.12e-17,3;UBERON:0000043,3.12e-17,3;UBERON:0007845,3.12e-17,3;UBERON:0001473,4.09e-11,8;UBERON:0004536,4.09e-11,8;UBERON:0006558,4.09e-11,8;UBERON:0002465,6.52e-09,10;UBERON:0006915,8.67e-09,3;UBERON:0007616,8.67e-09,3;UBERON:0002217,8.67e-09,3;UBERON:0002018,8.67e-09,3;UBERON:0004535,4.84e-08,109;UBERON:0001009,9.56e-08,112;UBERON:0002049,1.17e-07,78;UBERON:0007798,1.17e-07,78;UBERON:0000055,1.28e-07,68;UBERON:0004797,1.69e-07,7 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,3.48935409640147,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0,0.639312809217652,0.722878304769133,2.50668955317945,2.02785126545153,0,0.486634870302636,0,0,0.263504357079378,0,0,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,1.69592382577203,0.419499436209906,0.825354125820202,0.835979866147242,0.775250277507987,0.35576626268671,1.33888245105868,0,0.760272105718513,2.4406205754817,0.367663080345869,0.81014194788176,1.51809538082936,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0,0.496971951695318,1.51956613997496,0.264818361626438,2.29469296599051,0.709336764396714,0.560677600142307,1.06748995729705,0,0.933633106199299,0.538842688278752,0.980771418680752,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0.538168907066586,1.2813443329114,1.05965950579781,0.300091096084402,0.412210116953756,0,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.552299391853796,0.161646056818812,0.710019185033229,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.330881918197182,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,1.44366447761074,2.31492756288305,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.630809660135739,0.702848489956279,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0.744323423456331,0.460385919864187,0.280660094433074,0.640695746278505,1.02341449813341,0.804269605718038,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,2.80690690932781,3.08454505380579,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,1.14378116354295,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.974853958525138,0,0,0.141405431953713,2.26016233240486,0,0,0.876901770507525,0,0,0,0,0.845086807596724,0.143411352204052,0.0982490410131212,0,0,5.48879851773927,3.95153871551882,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.557694977114413,0,0.227884111694002,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0.0730893170861856,0,0,0,0.225980740780532,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,1.28929632425987,0,1.11712960508902,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,1.51230923763239,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0.906823702049089,0.463044948647668,0.489473409012935,0.71635536432595,3.08801447160972,1.53498834705095,0,0.192914038270915,1.35153952522458,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0.118193840883968,0.111231401892069,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,1.48798007266701,1.84870251452567,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.33639558774184,0.190941474834495,0.202117188958219,0.43543349579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| ||
|short_description=p@chr2:56103806..56103824,- | |||
}} | }} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56103806..56103824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56103806..56103824, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.12e-17 | 3 |
tendon cell | 3.12e-17 | 3 |
lining cell | 8.10e-16 | 58 |
barrier cell | 8.10e-16 | 58 |
meso-epithelial cell | 2.35e-15 | 45 |
lymphangioblast | 8.97e-15 | 6 |
endothelial cell of lymphatic vessel | 8.97e-15 | 6 |
vascular lymphangioblast | 8.97e-15 | 6 |
endothelial cell | 6.20e-11 | 36 |
mesodermal cell | 7.12e-11 | 121 |
GAG secreting cell | 2.08e-10 | 9 |
carbohydrate secreting cell | 2.08e-10 | 9 |
endothelial cell of vascular tree | 2.59e-10 | 24 |
stromal cell | 5.37e-09 | 28 |
synovial cell | 8.67e-09 | 3 |
perirenal adipocyte cell | 3.52e-07 | 1 |
smooth muscle cell of the pulmonary artery | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.12e-17 | 3 |
tendon | 3.12e-17 | 3 |
regular connective tissue | 3.12e-17 | 3 |
lymphatic vessel | 4.09e-11 | 8 |
lymph vasculature | 4.09e-11 | 8 |
lymphatic part of lymphoid system | 4.09e-11 | 8 |
lymphoid system | 6.52e-09 | 10 |
stratified squamous epithelium | 8.67e-09 | 3 |
layer of synovial tissue | 8.67e-09 | 3 |
synovial joint | 8.67e-09 | 3 |
synovial membrane of synovial joint | 8.67e-09 | 3 |
cardiovascular system | 4.84e-08 | 109 |
circulatory system | 9.56e-08 | 112 |
vasculature | 1.17e-07 | 78 |
vascular system | 1.17e-07 | 78 |
vessel | 1.28e-07 | 68 |
blood vessel layer | 1.69e-07 | 7 |