FFCP PHASE1:Hg19::chr2:56104899..56104948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56104899..56104948,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56104899..56104948,- | |description=CAGE_peak_at_chr2:56104899..56104948,- | ||
|id=chr2:56104899..56104948,- | |id=chr2:56104899..56104948,- | ||
|ontology_enrichment_celltype=CL:0000222!1.40e-23!119;CL:0000213!8.25e-17!57;CL:0000215!8.25e-17!57;CL:0002139!2.68e-16!24;CL:0000115!2.38e-12!35;CL:0000220!2.51e-12!246;CL:0002321!3.07e-12!248;CL:0002078!4.93e-12!44;CL:0000071!8.42e-12!18;CL:0002546!8.42e-12!18;CL:0000055!3.48e-11!180;CL:0000057!1.90e-09!75;CL:0000076!3.26e-09!62;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0000187!2.10e-08!54;CL:1000413!9.98e-08!9;CL:0000183!3.12e-07!59;CL:0000359!5.63e-07!32;CL:0000393!8.41e-07!60;CL:0000211!8.41e-07!60 | |ontology_enrichment_celltype=CL:0000222!1.40e-23!119;CL:0000213!8.25e-17!57;CL:0000215!8.25e-17!57;CL:0002139!2.68e-16!24;CL:0000115!2.38e-12!35;CL:0000220!2.51e-12!246;CL:0002321!3.07e-12!248;CL:0002078!4.93e-12!44;CL:0000071!8.42e-12!18;CL:0002546!8.42e-12!18;CL:0000055!3.48e-11!180;CL:0000057!1.90e-09!75;CL:0000076!3.26e-09!62;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0000187!2.10e-08!54;CL:1000413!9.98e-08!9;CL:0000183!3.12e-07!59;CL:0000359!5.63e-07!32;CL:0000393!8.41e-07!60;CL:0000211!8.41e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.36e-30;24!CL:0000071;1.60e-21;18!CL:0000115;6.99e-21;36!CL:0002078;1.25e-16;45!CL:0000213;4.05e-16;58!CL:0000215;4.05e-16;58!CL:1000413;3.03e-13;9!CL:0002138;3.38e-10;6!CL:0002544;4.46e-09;6!CL:0002494;5.48e-09;16!CL:0000153;8.59e-07;9!CL:0000447;8.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.61e-30,24;CL:0000213,1.79e-28,58;CL:0000215,1.79e-28,58;CL:0000115,5.16e-25,36;CL:0002078,1.08e-23,45;CL:0000222,1.75e-22,121;CL:0000071,1.35e-21,18;CL:0002546,1.35e-21,18;CL:0000057,2.78e-15,76;CL:1000413,3.07e-13,9;CL:0002321,1.74e-10,250;CL:0005020,3.34e-10,6;CL:0002138,3.34e-10,6;CL:0005022,3.34e-10,6;CL:0000076,5.88e-10,63;CL:0002494,4.15e-09,16;CL:0002544,4.48e-09,6;CL:0000153,8.40e-07,9;CL:0000447,8.40e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-21;18!CL:0005022;3.38e-10;6!CL:0000222;3.22e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.18e-08;5!DOID:450;7.18e-08;5!DOID:66;7.18e-08;5!DOID:423;7.18e-08;5!DOID:0080000;7.18e-08;5!DOID:11722;7.18e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.58e-08,5;DOID:450,6.58e-08,5;DOID:66,6.58e-08,5;DOID:423,6.58e-08,5;DOID:0080000,6.58e-08,5;DOID:11722,6.58e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!3.15e-25!84;UBERON:0002049!3.36e-24!79;UBERON:0007798!3.36e-24!79;UBERON:0000055!6.50e-23!69;UBERON:0004535!1.63e-21!110;UBERON:0001009!4.27e-20!113;UBERON:0001981!7.98e-20!60;UBERON:0007500!7.98e-20!60;UBERON:0004537!7.98e-20!60;UBERON:0006965!7.98e-20!60;UBERON:0003914!4.93e-19!118;UBERON:0000477!2.17e-17!286;UBERON:0001637!7.16e-15!42;UBERON:0003509!7.16e-15!42;UBERON:0004572!7.16e-15!42;UBERON:0000490!5.97e-14!138;UBERON:0004111!6.63e-14!241;UBERON:0001986!8.42e-12!18;UBERON:0004638!8.42e-12!18;UBERON:0004852!8.42e-12!18;UBERON:0000483!1.63e-11!309;UBERON:0006914!2.61e-11!25;UBERON:0000119!5.50e-11!312;UBERON:0004573!1.26e-10!33;UBERON:0004571!1.26e-10!33;UBERON:0000487!1.29e-10!22;UBERON:0000468!1.90e-10!659;UBERON:0000025!3.18e-10!194;UBERON:0000947!2.13e-08!21;UBERON:0010191!2.13e-08!21;UBERON:0002385!4.79e-08!63;UBERON:0001015!4.79e-08!63;UBERON:0000383!4.79e-08!63;UBERON:0000467!7.39e-08!625;UBERON:0000480!9.83e-08!626;UBERON:0003915!9.98e-08!9;UBERON:0004700!9.98e-08!9;UBERON:0001917!9.98e-08!9;UBERON:0001134!1.22e-07!61;UBERON:0002036!1.22e-07!61;UBERON:0003082!1.22e-07!61;UBERON:0000948!5.02e-07!24;UBERON:0005498!5.02e-07!24;UBERON:0004140!5.02e-07!24;UBERON:0009881!5.02e-07!24;UBERON:0004141!5.02e-07!24;UBERON:0003084!5.02e-07!24;UBERON:0007005!5.02e-07!24;UBERON:0004139!5.02e-07!24;UBERON:0004291!5.02e-07!24 | |ontology_enrichment_uberon=UBERON:0004872!3.15e-25!84;UBERON:0002049!3.36e-24!79;UBERON:0007798!3.36e-24!79;UBERON:0000055!6.50e-23!69;UBERON:0004535!1.63e-21!110;UBERON:0001009!4.27e-20!113;UBERON:0001981!7.98e-20!60;UBERON:0007500!7.98e-20!60;UBERON:0004537!7.98e-20!60;UBERON:0006965!7.98e-20!60;UBERON:0003914!4.93e-19!118;UBERON:0000477!2.17e-17!286;UBERON:0001637!7.16e-15!42;UBERON:0003509!7.16e-15!42;UBERON:0004572!7.16e-15!42;UBERON:0000490!5.97e-14!138;UBERON:0004111!6.63e-14!241;UBERON:0001986!8.42e-12!18;UBERON:0004638!8.42e-12!18;UBERON:0004852!8.42e-12!18;UBERON:0000483!1.63e-11!309;UBERON:0006914!2.61e-11!25;UBERON:0000119!5.50e-11!312;UBERON:0004573!1.26e-10!33;UBERON:0004571!1.26e-10!33;UBERON:0000487!1.29e-10!22;UBERON:0000468!1.90e-10!659;UBERON:0000025!3.18e-10!194;UBERON:0000947!2.13e-08!21;UBERON:0010191!2.13e-08!21;UBERON:0002385!4.79e-08!63;UBERON:0001015!4.79e-08!63;UBERON:0000383!4.79e-08!63;UBERON:0000467!7.39e-08!625;UBERON:0000480!9.83e-08!626;UBERON:0003915!9.98e-08!9;UBERON:0004700!9.98e-08!9;UBERON:0001917!9.98e-08!9;UBERON:0001134!1.22e-07!61;UBERON:0002036!1.22e-07!61;UBERON:0003082!1.22e-07!61;UBERON:0000948!5.02e-07!24;UBERON:0005498!5.02e-07!24;UBERON:0004140!5.02e-07!24;UBERON:0009881!5.02e-07!24;UBERON:0004141!5.02e-07!24;UBERON:0003084!5.02e-07!24;UBERON:0007005!5.02e-07!24;UBERON:0004139!5.02e-07!24;UBERON:0004291!5.02e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-21;18!UBERON:0001986;1.60e-21;18!UBERON:0004852;1.60e-21;18!UBERON:0006914;1.05e-20;25!UBERON:0000487;7.53e-19;22!UBERON:0003915;3.03e-13;9!UBERON:0004700;3.03e-13;9!UBERON:0001917;3.03e-13;9!UBERON:0001637;5.56e-13;42!UBERON:0003509;5.56e-13;42!UBERON:0004572;5.56e-13;42!UBERON:0000055;7.52e-13;65!UBERON:0000490;1.76e-12;33!UBERON:0007500;5.34e-12;56!UBERON:0001981;5.34e-12;56!UBERON:0004537;5.34e-12;56!UBERON:0004457;6.71e-11;9!UBERON:0000042;6.71e-11;9!UBERON:0004573;5.44e-10;33!UBERON:0004571;5.44e-10;33!UBERON:0002049;1.48e-09;75!UBERON:0007798;1.48e-09;75!UBERON:0000947;2.42e-09;21!UBERON:0010191;2.42e-09;21!UBERON:0003688;2.64e-09;6!UBERON:0002358;2.64e-09;6!UBERON:0003684;2.64e-09;6!UBERON:0001178;2.64e-09;6!UBERON:0003914;4.01e-08;74!UBERON:0004535;7.08e-08;109!UBERON:0001473;2.34e-07;8!UBERON:0004536;2.34e-07;8!UBERON:0006558;2.34e-07;8!UBERON:0000948;6.37e-07;22 | |||
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| ||
|short_description=p@chr2:56104899..56104948,- | |short_description=p@chr2:56104899..56104948,- | ||
}} | }} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56104899..56104948, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56104899..56104948, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.61e-30 | 24 |
lining cell | 1.79e-28 | 58 |
barrier cell | 1.79e-28 | 58 |
endothelial cell | 5.16e-25 | 36 |
meso-epithelial cell | 1.08e-23 | 45 |
mesodermal cell | 1.75e-22 | 121 |
blood vessel endothelial cell | 1.35e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.35e-21 | 18 |
fibroblast | 2.78e-15 | 76 |
endothelial cell of artery | 3.07e-13 | 9 |
embryonic cell | 1.74e-10 | 250 |
lymphangioblast | 3.34e-10 | 6 |
endothelial cell of lymphatic vessel | 3.34e-10 | 6 |
vascular lymphangioblast | 3.34e-10 | 6 |
squamous epithelial cell | 5.88e-10 | 63 |
cardiocyte | 4.15e-09 | 16 |
aortic endothelial cell | 4.48e-09 | 6 |
GAG secreting cell | 8.40e-07 | 9 |
carbohydrate secreting cell | 8.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.58e-08 | 5 |
myotonic disease | 6.58e-08 | 5 |
muscle tissue disease | 6.58e-08 | 5 |
myopathy | 6.58e-08 | 5 |
muscular disease | 6.58e-08 | 5 |
myotonic dystrophy | 6.58e-08 | 5 |