FFCP PHASE1:Hg19::chr2:56145348..56145379,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:56145348..56145379,+
|short_description=p@chr2:56145348..56145379,+
|description=CAGE_peak_at_chr2:56145348..56145379,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:56145348..56145379,+ | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56145348..56145379,+ | |||
|id=chr2:56145348..56145379,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.48e-26!119;CL:0002139!1.27e-21!24;CL:0000213!4.81e-19!57;CL:0000215!4.81e-19!57;CL:0000071!2.32e-16!18;CL:0002546!2.32e-16!18;CL:0002078!1.98e-15!44;CL:0000055!3.87e-14!180;CL:0000115!4.36e-14!35;CL:0000220!4.46e-12!246;CL:0002321!4.70e-12!248;CL:0000057!1.00e-10!75;CL:0000076!2.54e-10!62;CL:0000187!4.23e-10!54;CL:0000680!1.21e-09!57;CL:0000056!1.21e-09!57;CL:0000355!1.21e-09!57;CL:1000413!4.42e-09!9;CL:0000183!6.81e-09!59;CL:0002494!3.41e-08!16;CL:0000359!4.51e-08!32;CL:0000393!5.84e-08!60;CL:0000211!5.84e-08!60;CL:0000192!2.97e-07!42;CL:0000514!2.97e-07!42;CL:0005020!8.11e-07!6;CL:0002138!8.11e-07!6;CL:0005022!8.11e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.13e-41;24!CL:0000071;3.25e-30;18!CL:0000115;3.03e-25;36!CL:0002078;8.06e-21;45!CL:1000413;2.46e-17;9!CL:0000213;2.76e-15;58!CL:0000215;2.76e-15;58!CL:0002138;5.27e-13;6!CL:0002543;1.36e-12;6!CL:0002544;2.02e-12;6!CL:0000746;1.81e-07;3!CL:0002618;2.11e-07;3!CL:0002494;3.58e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.56e-42,24;CL:0000071,1.87e-30,18;CL:0002546,1.87e-30,18;CL:0000115,2.98e-30,36;CL:0002078,1.85e-29,45;CL:0000222,4.66e-27,121;CL:0000213,1.45e-24,58;CL:0000215,1.45e-24,58;CL:1000413,8.40e-18,9;CL:0002321,2.16e-13,250;CL:0005020,6.28e-13,6;CL:0002138,6.28e-13,6;CL:0005022,6.28e-13,6;CL:0002544,1.09e-12,6;CL:0002543,2.08e-12,6;CL:0000076,6.87e-09,63;CL:0000746,2.23e-07,3;CL:0000513,2.23e-07,3;CL:0002618,2.28e-07,3;CL:0002494,3.78e-07,16;CL:0000187,6.84e-07,55;CL:0002615,7.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.25e-30;18!CL:0005022;5.27e-13;6!CL:0000222;1.54e-07;121!CL:0000513;1.81e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.23e-27!84;UBERON:0002049!2.09e-26!79;UBERON:0007798!2.09e-26!79;UBERON:0000055!2.95e-25!69;UBERON:0004535!7.19e-25!110;UBERON:0001009!2.19e-24!113;UBERON:0001981!2.21e-21!60;UBERON:0007500!2.21e-21!60;UBERON:0004537!2.21e-21!60;UBERON:0006965!2.21e-21!60;UBERON:0003914!4.78e-18!118;UBERON:0006914!2.67e-17!25;UBERON:0001637!1.47e-16!42;UBERON:0003509!1.47e-16!42;UBERON:0004572!1.47e-16!42;UBERON:0001986!2.32e-16!18;UBERON:0004638!2.32e-16!18;UBERON:0004852!2.32e-16!18;UBERON:0000487!3.56e-15!22;UBERON:0000490!1.00e-14!138;UBERON:0004573!2.49e-11!33;UBERON:0004571!2.49e-11!33;UBERON:0000477!2.03e-10!286;UBERON:0000483!8.97e-10!309;UBERON:0000119!2.32e-09!312;UBERON:0003915!4.42e-09!9;UBERON:0004700!4.42e-09!9;UBERON:0001917!4.42e-09!9;UBERON:0001134!8.75e-09!61;UBERON:0002036!8.75e-09!61;UBERON:0003082!8.75e-09!61;UBERON:0002385!1.08e-08!63;UBERON:0001015!1.08e-08!63;UBERON:0000383!1.08e-08!63;UBERON:0004111!1.83e-08!241;UBERON:0000948!3.81e-08!24;UBERON:0005498!3.81e-08!24;UBERON:0004140!3.81e-08!24;UBERON:0009881!3.81e-08!24;UBERON:0004141!3.81e-08!24;UBERON:0003084!3.81e-08!24;UBERON:0007005!3.81e-08!24;UBERON:0004139!3.81e-08!24;UBERON:0004291!3.81e-08!24;UBERON:0000947!3.86e-08!21;UBERON:0010191!3.86e-08!21;UBERON:0000486!1.40e-07!82;UBERON:0000025!1.47e-07!194;UBERON:0007100!1.75e-07!27;UBERON:0000914!2.21e-07!83;UBERON:0002329!2.21e-07!83;UBERON:0003077!2.21e-07!83;UBERON:0003059!2.21e-07!83;UBERON:0007282!2.21e-07!83;UBERON:0009618!2.21e-07!83;UBERON:0007285!2.21e-07!83;UBERON:0004290!8.62e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-30;18!UBERON:0001986;3.25e-30;18!UBERON:0004852;3.25e-30;18!UBERON:0006914;4.06e-29;25!UBERON:0000487;1.34e-26;22!UBERON:0000490;1.41e-18;33!UBERON:0000055;1.11e-17;65!UBERON:0003915;2.46e-17;9!UBERON:0004700;2.46e-17;9!UBERON:0001917;2.46e-17;9!UBERON:0007500;6.18e-16;56!UBERON:0001981;6.18e-16;56!UBERON:0004537;6.18e-16;56!UBERON:0001637;1.28e-15;42!UBERON:0003509;1.28e-15;42!UBERON:0004572;1.28e-15;42!UBERON:0002049;5.17e-13;75!UBERON:0007798;5.17e-13;75!UBERON:0004573;8.58e-13;33!UBERON:0004571;8.58e-13;33!UBERON:0000947;5.16e-11;21!UBERON:0010191;5.16e-11;21!UBERON:0004535;4.68e-10;109!UBERON:0001473;1.66e-09;8!UBERON:0004536;1.66e-09;8!UBERON:0006558;1.66e-09;8!UBERON:0001009;1.26e-08;112!UBERON:0003914;1.98e-08;74!UBERON:0001638;4.41e-08;9!UBERON:0003920;4.41e-08;9!UBERON:0004582;4.41e-08;9!UBERON:0004457;6.35e-08;9!UBERON:0000042;6.35e-08;9!UBERON:0002465;2.06e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.33e-31,68;UBERON:0004638,1.87e-30,18;UBERON:0001986,1.87e-30,18;UBERON:0004852,1.87e-30,18;UBERON:0006914,2.03e-29,25;UBERON:0004872,3.09e-28,83;UBERON:0002049,1.55e-27,78;UBERON:0007798,1.55e-27,78;UBERON:0004535,2.47e-27,109;UBERON:0000487,6.59e-27,22;UBERON:0001009,3.11e-26,112;UBERON:0007500,1.58e-24,59;UBERON:0001981,1.58e-24,59;UBERON:0004537,1.58e-24,59;UBERON:0006965,1.58e-24,59;UBERON:0003914,2.09e-22,117;UBERON:0001637,5.70e-19,42;UBERON:0003509,5.70e-19,42;UBERON:0004572,5.70e-19,42;UBERON:0003915,8.40e-18,9;UBERON:0004700,8.40e-18,9;UBERON:0001917,8.40e-18,9;UBERON:0004573,1.52e-13,33;UBERON:0004571,1.52e-13,33;UBERON:0000490,5.62e-13,148;UBERON:0000947,3.86e-11,21;UBERON:0010191,3.86e-11,21;UBERON:0004111,1.99e-10,240;UBERON:0000025,4.85e-10,192;UBERON:0001473,1.88e-09,8;UBERON:0004536,1.88e-09,8;UBERON:0006558,1.88e-09,8;UBERON:0001638,5.76e-08,9;UBERON:0003920,5.76e-08,9;UBERON:0004582,5.76e-08,9;UBERON:0003081,8.34e-08,203;UBERON:0002465,2.27e-07,10 | |||
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| ||
|short_description=p@chr2:56145348..56145379,+ | |||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56145348..56145379, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56145348..56145379, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.56e-42 | 24 |
blood vessel endothelial cell | 1.87e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.87e-30 | 18 |
endothelial cell | 2.98e-30 | 36 |
meso-epithelial cell | 1.85e-29 | 45 |
mesodermal cell | 4.66e-27 | 121 |
lining cell | 1.45e-24 | 58 |
barrier cell | 1.45e-24 | 58 |
endothelial cell of artery | 8.40e-18 | 9 |
embryonic cell | 2.16e-13 | 250 |
lymphangioblast | 6.28e-13 | 6 |
endothelial cell of lymphatic vessel | 6.28e-13 | 6 |
vascular lymphangioblast | 6.28e-13 | 6 |
aortic endothelial cell | 1.09e-12 | 6 |
vein endothelial cell | 2.08e-12 | 6 |
squamous epithelial cell | 6.87e-09 | 63 |
cardiac muscle cell | 2.23e-07 | 3 |
cardiac muscle myoblast | 2.23e-07 | 3 |
endothelial cell of umbilical vein | 2.28e-07 | 3 |
cardiocyte | 3.78e-07 | 16 |
muscle cell | 6.84e-07 | 55 |
adipocyte of omentum tissue | 7.32e-07 | 3 |