FFCP PHASE1:Hg19::chr2:8826713..8826716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:8826713..8826716,+ | |||
|description=CAGE_peak_at_chr2:8826713..8826716,+ | |description=CAGE_peak_at_chr2:8826713..8826716,+ | ||
|id=chr2:8826713..8826716,+ | |id=chr2:8826713..8826716,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.39e-09!140;CL:0002031!7.10e-09!124;CL:0002032!1.56e-08!165;CL:0000837!1.56e-08!165;CL:0002087!2.99e-08!119;CL:0000037!3.91e-08!172;CL:0000566!3.91e-08!172;CL:0000988!5.25e-07!182;CL:0000860!9.67e-07!45 | |ontology_enrichment_celltype=CL:0000738!1.39e-09!140;CL:0002031!7.10e-09!124;CL:0002032!1.56e-08!165;CL:0000837!1.56e-08!165;CL:0002087!2.99e-08!119;CL:0000037!3.91e-08!172;CL:0000566!3.91e-08!172;CL:0000988!5.25e-07!182;CL:0000860!9.67e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002127;9.98e-30;1!CL:0000911;9.98e-30;1!CL:0000814;9.98e-30;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.48e-30,1;CL:0000914,7.48e-30,1;CL:0000911,7.48e-30,1;CL:0000814,7.48e-30,1;CL:0002042,7.48e-30,1;CL:0002039,7.48e-30,1;CL:0002040,7.48e-30,1;CL:0002041,7.48e-30,1;CL:0000893,1.15e-15,2;CL:0002489,1.15e-15,2;CL:0000809,1.15e-15,2;CL:0000808,1.15e-15,2;CL:0000894,1.15e-15,2;CL:0000806,1.15e-15,2;CL:0000807,1.15e-15,2;CL:0000805,1.15e-15,2;CL:0002425,1.15e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.33e-15;2 | |||
|ontology_enrichment_disease=DOID:162!1.77e-12!235;DOID:14566!8.09e-12!239;DOID:0050687!4.33e-10!143;DOID:305!7.10e-09!106;DOID:171!8.41e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.82e-08;4!UBERON:0000923;1.82e-08;4!UBERON:0010316;1.82e-08;4!UBERON:0005291;1.82e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-08,4;UBERON:0005058,1.70e-08,4;UBERON:0009113,1.70e-08,4;UBERON:0003295,1.70e-08,4;UBERON:0005562,1.70e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.236132343941038,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,1.00272223735071,0.868043482863407,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0,0,1.37898272294647,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,1.47311054395026,0,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,2.80212859983818,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0.306923946576125,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0.929015875628594,0,0.284567373393656,0,0,0,0,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0.994147647766298,0,0.445234820091624,0.494411622680279,0.422250816255987,0.19924798825107,0,0.755798243562828,0,0.615424027305347,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.699679999969566,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.83654246567162,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.292357268344742,0.0821154570532092,0,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0.171594997861965,0.432164393964449,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,2.32991899054908,0,0,0.26961417541674,0.196854963029498,0,0,0,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0.786329709279482,0,0.169732529954025,0.850299680406731,2.10690799240304,0,0,0.47317047000752,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,0,0,0.994581110581374,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.935757853848423,1.59160620129095,0.118920090777569,0.22589216407792,0,0.452888530700021,0,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0.599646935549574,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0.50141507858475,0,0,0,0,0,0,0,0.372448285775147,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p@chr2:8826713..8826716,+ | |short_description=p@chr2:8826713..8826716,+ | ||
}} | }} |
Latest revision as of 12:57, 29 July 2015
Short description: | p@chr2:8826713..8826716, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:8826713..8826716, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.48e-30 | 1 |
immature NK T cell | 7.48e-30 | 1 |
effector T cell | 7.48e-30 | 1 |
mature NK T cell | 7.48e-30 | 1 |
immature NK T cell stage IV | 7.48e-30 | 1 |
immature NK T cell stage I | 7.48e-30 | 1 |
immature NK T cell stage II | 7.48e-30 | 1 |
immature NK T cell stage III | 7.48e-30 | 1 |
thymocyte | 1.15e-15 | 2 |
double negative thymocyte | 1.15e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.15e-15 | 2 |
DN4 thymocyte | 1.15e-15 | 2 |
DN1 thymic pro-T cell | 1.15e-15 | 2 |
DN2 thymocyte | 1.15e-15 | 2 |
DN3 thymocyte | 1.15e-15 | 2 |
immature single positive thymocyte | 1.15e-15 | 2 |
early T lineage precursor | 1.15e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-08 | 4 |
hemolymphoid system gland | 1.70e-08 | 4 |
thymic region | 1.70e-08 | 4 |
pharyngeal gland | 1.70e-08 | 4 |
thymus primordium | 1.70e-08 | 4 |