FFCP PHASE1:Hg19::chr2:95713696..95713707,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:95713696..95713707,+ | |||
|description=CAGE_peak_at_chr2:95713696..95713707,+ | |description=CAGE_peak_at_chr2:95713696..95713707,+ | ||
|id=chr2:95713696..95713707,+ | |id=chr2:95713696..95713707,+ | ||
|ontology_enrichment_celltype=CL:0000148!3.82e-13!10;CL:0000541!3.82e-13!10;CL:0000147!2.65e-09!14;CL:0002127!8.81e-07!1;CL:0000914!8.81e-07!1;CL:0000911!8.81e-07!1;CL:0000814!8.81e-07!1;CL:0002042!8.81e-07!1;CL:0002039!8.81e-07!1;CL:0002040!8.81e-07!1;CL:0002041!8.81e-07!1 | |ontology_enrichment_celltype=CL:0000148!3.82e-13!10;CL:0000541!3.82e-13!10;CL:0000147!2.65e-09!14;CL:0002127!8.81e-07!1;CL:0000914!8.81e-07!1;CL:0000911!8.81e-07!1;CL:0000814!8.81e-07!1;CL:0002042!8.81e-07!1;CL:0002039!8.81e-07!1;CL:0002040!8.81e-07!1;CL:0002041!8.81e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.61e-34;1!CL:0000911;3.61e-34;1!CL:0000814;3.61e-34;1!CL:0000148;2.39e-30;10!CL:0000147;6.00e-22;14!CL:0000710;1.26e-15;20!CL:0002567;2.31e-12;3!CL:0000075;8.78e-12;27!CL:0002077;3.06e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.05e-34,1;CL:0000914,5.05e-34,1;CL:0000911,5.05e-34,1;CL:0000814,5.05e-34,1;CL:0002042,5.05e-34,1;CL:0002039,5.05e-34,1;CL:0002040,5.05e-34,1;CL:0002041,5.05e-34,1;CL:0000148,2.51e-30,10;CL:0000541,2.51e-30,10;CL:0000147,6.21e-22,14;CL:0000893,9.07e-18,2;CL:0002489,9.07e-18,2;CL:0000809,9.07e-18,2;CL:0000808,9.07e-18,2;CL:0000894,9.07e-18,2;CL:0000806,9.07e-18,2;CL:0000807,9.07e-18,2;CL:0000805,9.07e-18,2;CL:0002425,9.07e-18,2;CL:0000710,1.29e-15,20;CL:0002567,2.31e-12,3;CL:0000075,8.94e-12,27;CL:0002077,1.67e-09,34;CL:0000333,1.16e-07,41 | |||
|ontology_enrichment_development_v019=CL:0002425;7.67e-18;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.38e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.17e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.07e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.88e-08!10;UBERON:0009145!1.88e-08!10;UBERON:0002240!5.17e-08!3;UBERON:0001723!6.80e-08!3;UBERON:0001033!6.80e-08!3;UBERON:0010056!6.80e-08!3;UBERON:0006562!1.09e-07!11;UBERON:0002771!2.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.31e-12;3!UBERON:0004177;6.13e-08;5!UBERON:0005057;6.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.13e-20,7;UBERON:0005057,7.13e-20,7;UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3;UBERON:0002370,1.44e-09,4;UBERON:0005058,1.44e-09,4;UBERON:0009113,1.44e-09,4;UBERON:0003295,1.44e-09,4;UBERON:0005562,1.44e-09,4;UBERON:0003351,8.48e-07,6 | |||
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|short_description=p@chr2:95713696..95713707,+ | |short_description=p@chr2:95713696..95713707,+ | ||
}} | }} |
Latest revision as of 13:11, 29 July 2015
Short description: | p@chr2:95713696..95713707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95713696..95713707, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.05e-34 | 1 |
immature NK T cell | 5.05e-34 | 1 |
effector T cell | 5.05e-34 | 1 |
mature NK T cell | 5.05e-34 | 1 |
immature NK T cell stage IV | 5.05e-34 | 1 |
immature NK T cell stage I | 5.05e-34 | 1 |
immature NK T cell stage II | 5.05e-34 | 1 |
immature NK T cell stage III | 5.05e-34 | 1 |
melanocyte | 2.51e-30 | 10 |
melanoblast | 2.51e-30 | 10 |
pigment cell | 6.21e-22 | 14 |
thymocyte | 9.07e-18 | 2 |
double negative thymocyte | 9.07e-18 | 2 |
double-positive, alpha-beta thymocyte | 9.07e-18 | 2 |
DN4 thymocyte | 9.07e-18 | 2 |
DN1 thymic pro-T cell | 9.07e-18 | 2 |
DN2 thymocyte | 9.07e-18 | 2 |
DN3 thymocyte | 9.07e-18 | 2 |
immature single positive thymocyte | 9.07e-18 | 2 |
early T lineage precursor | 9.07e-18 | 2 |
neurecto-epithelial cell | 1.29e-15 | 20 |
light melanocyte | 2.31e-12 | 3 |
columnar/cuboidal epithelial cell | 8.94e-12 | 27 |
ecto-epithelial cell | 1.67e-09 | 34 |
migratory neural crest cell | 1.16e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 7.13e-20 | 7 |
immune organ | 7.13e-20 | 7 |
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
thymus | 1.44e-09 | 4 |
hemolymphoid system gland | 1.44e-09 | 4 |
thymic region | 1.44e-09 | 4 |
pharyngeal gland | 1.44e-09 | 4 |
thymus primordium | 1.44e-09 | 4 |
pharyngeal epithelium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.07e-17 | 2 |