FFCP PHASE1:Hg19::chr3:14167227..14167253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14167227..14167253,- | |||
|description=CAGE_peak_at_chr3:14167227..14167253,- | |description=CAGE_peak_at_chr3:14167227..14167253,- | ||
|id=chr3:14167227..14167253,- | |id=chr3:14167227..14167253,- | ||
|ontology_enrichment_celltype=CL:0000055!8.60e-17!180;CL:0000057!4.96e-16!75;CL:0002620!1.14e-10!23;CL:0000220!7.51e-08!246;CL:0002321!1.22e-07!248;CL:0000144!2.20e-07!625 | |ontology_enrichment_celltype=CL:0000055!8.60e-17!180;CL:0000057!4.96e-16!75;CL:0002620!1.14e-10!23;CL:0000220!7.51e-08!246;CL:0002321!1.22e-07!248;CL:0000144!2.20e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.09e-10;23!CL:0000349;7.02e-09;19!CL:0002577;2.35e-08;3!CL:0002623;8.31e-08;3!CL:0002615;1.15e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;3.09e-10;23!CL:0000349;7.02e-09;19!CL:0002577;2.35e-08;3!CL:0002623;8.31e-08;3!CL:0002615;1.15e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.00e-11,76;CL:0002620,3.00e-10,23;CL:0000349,6.84e-09,19;CL:0002577,1.41e-08,3;CL:0002623,7.03e-08,3;CL:0002615,2.27e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.09e-08;5!DOID:450;6.09e-08;5!DOID:66;6.09e-08;5!DOID:423;6.09e-08;5!DOID:0080000;6.09e-08;5!DOID:11722;6.09e-08;5 | |ontology_enrichment_disease_v019=DOID:17;6.09e-08;5!DOID:450;6.09e-08;5!DOID:66;6.09e-08;5!DOID:423;6.09e-08;5!DOID:0080000;6.09e-08;5!DOID:11722;6.09e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.73e-08,5;DOID:450,4.73e-08,5;DOID:66,4.73e-08,5;DOID:423,4.73e-08,5;DOID:0080000,4.73e-08,5;DOID:11722,4.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.02e-11!95;UBERON:0000468!1.80e-08!659;UBERON:0002097!2.37e-08!40;UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0000480!1.13e-07!626;UBERON:0000467!1.25e-07!625;UBERON:0004923!1.95e-07!57 | |ontology_enrichment_uberon=UBERON:0003102!6.02e-11!95;UBERON:0000468!1.80e-08!659;UBERON:0002097!2.37e-08!40;UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0000480!1.13e-07!626;UBERON:0000467!1.25e-07!625;UBERON:0004923!1.95e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.23e-10;4!UBERON:0000478;2.60e-08;24 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.23e-10;4!UBERON:0000478;2.60e-08;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.33e-13,14;UBERON:0000158,4.33e-13,14;UBERON:0001987,8.17e-11,4;UBERON:0004340,8.17e-11,4;UBERON:0003124,4.95e-09,7;UBERON:0000478,2.64e-08,24;UBERON:0004871,1.41e-07,8 | |||
|phase1_expression=0.908391896352783,0.856402095563933,1.12763523276777,2.00146596706261,1.34088328328186,0,0,0.631719873426831,0,0.491467873003018,1.39560233594486,2.83973783769224,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,0,0.730310090387373,0,0.369363174230364,0,0.626909442956176,0,0.410623275218653,0.251085279189606,0,0,0,0,0,1.08371286321253,1.83884244895785,0.90361775633475,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0.641858054152187,0,0.659702600373432,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.632924774881769,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0.670700859703636,0.255725123687061,0.361439152384566,2.00535164254356,1.01392563272577,0,1.45990461090791,0.0945348171640679,0,0.087834785693126,0.392937226493138,0.728590576585084,0.741568885568859,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0.56530794192401,0,0.275118041940067,0.835979866147242,0,0.71153252537342,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.366403487860815,0,0,1.3082821564276,0.993943903390637,0.506522046658319,2.91300197789081,0.860509862246441,1.41867352879343,0.560677600142307,0,0.24666754841716,1.24484414159907,0.67355336034844,0.326923806226917,0.302714855289863,0,1.40592859100278,0.624320153660641,0.570471821544449,0.896692083310806,0.352303495931295,0.323745888736263,0.421352420106746,0.408308342509787,0.368502951935304,0.929932030581889,1.18800285728205,1.48360157567134,0,0.718618141816238,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,1.25572744982203,2.13557388818567,2.7551147150743,1.80054657650641,0.92747276314595,2.31876486041066,1.48893485065272,0.506328996723799,0.974370051611986,3.02920529092937,2.66944706062668,1.45481451136931,0.710019185033229,1.10827308050404,0.847802961552438,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0,0.878002283269004,0,0.402115889646523,0.277765335475589,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0,0.492434012174795,0,1.0404181360211,0,0,0,0.985143749731331,0.581267877027924,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,14.3062578340753,0,0.531876233169741,1.04007436911366,0,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.904318131178758,2.61460037580088,1.3996218765488,1.2162378064119,0,0,1.19812427745791,0,0,0.868687840005475,0.61642896765115,0.537182889719687,0,0,0.215627574859517,0,0.508189248444927,0,0.773288812777695,0,1.91381625495949,0,0,0,0.24538298343828,0,0,1.45579603071565,0.356857977594324,0.946214490203608,1.28855556491985,0.300946099727719,0,3.10419213877515,1.32845119707087,1.10621501125022,1.99832313276591,0,0,0,0,0.213455115606889,6.36567900037145,1.66435439510497,3.32629322662648,0.744323423456331,2.30192959932094,1.12264037773229,0.640695746278505,0.511707249066704,0.804269605718038,1.48418066444991,0.154209693802656,0.532685175939381,0.328508624055237,0.519254429183621,0.232420756919918,0.604297247958111,0.601519410909855,0.736647911487171,0.68888668898764,0.546273504020151,0.917870904715969,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0.386682873168488,0.462145851343933,0.15350367472613,0.275673144969061,0.751941714077915,0.725083469571143,0.340906509664404,0.445160178233687,0.661139661443912,0.384380134730212,0.255225424989168,0.30347334256665,0.929691098594572,0.31481234683064,0,0.924100740528266,1.06461206063404,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0.95460974377781,0.78494864019923,0.899362287916574,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.975267478179181,0,0,0.409499734223957,0.848432591722276,2.26016233240486,0.551365343546124,0,0,0,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0,0.392996164052485,1.07001315444375,0.709522128141196,0.422215270595328,0.987884678879706,0.379473173765715,1.39973888097993,0.288666338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| ||
|short_description=p@chr3:14167227..14167253,- | |short_description=p@chr3:14167227..14167253,- | ||
}} | }} |
Latest revision as of 16:28, 29 July 2015
Short description: | p@chr3:14167227..14167253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14167227..14167253, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.00e-11 | 76 |
skin fibroblast | 3.00e-10 | 23 |
extraembryonic cell | 6.84e-09 | 19 |
placental epithelial cell | 1.41e-08 | 3 |
acinar cell of salivary gland | 7.03e-08 | 3 |
adipocyte of omentum tissue | 2.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.33e-13 | 14 |
membranous layer | 4.33e-13 | 14 |
placenta | 8.17e-11 | 4 |
allantois | 8.17e-11 | 4 |
chorion | 4.95e-09 | 7 |
extraembryonic structure | 2.64e-08 | 24 |
somatic layer of lateral plate mesoderm | 1.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.73e-08 | 5 |
myotonic disease | 4.73e-08 | 5 |
muscle tissue disease | 4.73e-08 | 5 |
myopathy | 4.73e-08 | 5 |
muscular disease | 4.73e-08 | 5 |
myotonic dystrophy | 4.73e-08 | 5 |