FFCP PHASE1:Hg19::chr3:151514337..151514348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:151514337..151514348,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr3:151514337..151514348,+ | |description=CAGE_peak_at_chr3:151514337..151514348,+ | ||
|id=chr3:151514337..151514348,+ | |id=chr3:151514337..151514348,+ | ||
|ontology_enrichment_celltype=CL:0002595;3.55e-27;5!CL:0000077;6.36e-08;19 | |ontology_enrichment_celltype=CL:0000569!1.28e-09!4;CL:0000011!1.28e-09!4;CL:0002595!4.15e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002595;3.55e-27;5!CL:0000077;6.36e-08;19 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002595,4.63e-27,5;CL:0000077,5.94e-08,19 | ||
|ontology_enrichment_uberon=UBERON:0003834;3.55e-27;5!UBERON:0001533;3.55e-27;5!UBERON:0003513;9.48e-20;7!UBERON:0002108;5.35e-08;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.34e-15!14;DOID:120!5.16e-08!27;DOID:193!1.90e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001882!1.17e-09!1;UBERON:0005403!1.17e-09!1;UBERON:0003834!4.15e-08!5;UBERON:0001533!4.15e-08!5;UBERON:0002118!5.69e-08!5;UBERON:0004532!5.69e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.55e-27;5!UBERON:0001533;3.55e-27;5!UBERON:0003513;9.48e-20;7!UBERON:0002108;5.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.63e-27,5;UBERON:0001533,4.63e-27,5;UBERON:0003513,1.15e-19,7;UBERON:0002108,5.35e-08,4 | |||
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|short_description=p@chr3:151514337..151514348,+ | |short_description=p@chr3:151514337..151514348,+ | ||
}} | }} | ||
Latest revision as of 17:07, 29 July 2015
| Short description: | p@chr3:151514337..151514348, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:151514337..151514348, + |
| Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell of the subclavian artery | 4.63e-27 | 5 |
| mesothelial cell | 5.94e-08 | 19 |
| Ontology term | p-value | n |
|---|---|---|
| thoracic segment blood vessel | 4.63e-27 | 5 |
| subclavian artery | 4.63e-27 | 5 |
| trunk blood vessel | 1.15e-19 | 7 |
| small intestine | 5.35e-08 | 4 |