FFCP PHASE1:Hg19::chr3:152881467..152881482,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:152881467..152881482,+ to FFCP PHASE1:Hg19::chr3:152881467..152881482,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:152881467..152881482,+ | |||
|coexpression_cluster_id=C4296 | |||
|description=CAGE_peak_at_chr3:152881467..152881482,+ | |||
|id=chr3:152881467..152881482,+ | |||
|ontology_enrichment_celltype=CL:0000003!1.83e-23!722;CL:0002009!5.04e-22!65;CL:0002194!8.81e-22!63;CL:0000576!8.81e-22!63;CL:0000040!8.81e-22!63;CL:0000559!8.81e-22!63;CL:0002057!3.87e-21!42;CL:0000548!1.79e-20!679;CL:0000004!1.79e-20!679;CL:0000255!1.79e-20!679;CL:0000012!3.99e-20!682;CL:0000839!6.00e-20!70;CL:0000860!1.58e-19!45;CL:0000557!2.39e-18!71;CL:0000063!2.48e-18!578;CL:0000766!4.47e-17!76;CL:0000144!1.02e-16!625;CL:0002371!1.20e-16!591;CL:0000763!3.43e-15!112;CL:0000049!3.43e-15!112;CL:0002087!2.17e-12!119;CL:0000066!3.30e-12!254;CL:0002031!4.41e-12!124;CL:0002032!2.51e-10!165;CL:0000837!2.51e-10!165;CL:0000738!2.71e-10!140;CL:0000988!3.48e-10!182;CL:0000037!1.01e-09!172;CL:0000566!1.01e-09!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.43e-16;39!CL:0000234;1.43e-16;39!CL:0000860;1.69e-15;33!CL:0002057;1.69e-15;33!CL:0000576;7.81e-14;48!CL:0000766;4.71e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.32e-25,48;CL:0000234,5.32e-25,48;CL:0002009,5.71e-24,61;CL:0002194,9.18e-24,59;CL:0000576,9.18e-24,59;CL:0000040,9.18e-24,59;CL:0000559,9.18e-24,59;CL:0000839,1.28e-21,66;CL:0000860,3.87e-21,42;CL:0002057,3.87e-21,42;CL:0000557,6.87e-20,67;CL:0000766,1.91e-18,72;CL:0000763,4.31e-16,108;CL:0000049,4.31e-16,108;CL:0002087,4.15e-13,115;CL:0002031,9.19e-13,120;CL:0000066,1.69e-12,253;CL:0000738,7.61e-11,136;CL:0002032,8.09e-11,161;CL:0000837,8.09e-11,161;CL:0000988,2.16e-10,177;CL:0000037,3.54e-10,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.21e-18!112;UBERON:0002390!9.37e-18!102;UBERON:0003061!9.37e-18!102;UBERON:0002371!2.30e-17!80;UBERON:0001474!7.47e-16!86;UBERON:0004765!4.93e-13!101;UBERON:0001434!4.93e-13!101;UBERON:0003081!1.75e-12!216;UBERON:0002405!1.17e-10!115;UBERON:0002204!1.74e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.89e-19,108;UBERON:0002390,7.48e-19,98;UBERON:0003061,7.48e-19,98;UBERON:0002371,1.09e-18,76;UBERON:0004765,3.67e-17,90;UBERON:0001474,5.24e-17,82;UBERON:0002405,9.27e-16,93;UBERON:0001434,7.06e-14,100;UBERON:0003081,4.33e-11,203;UBERON:0002204,1.04e-08,167 | |||
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| ||
|short_description=p@chr3:152881467..152881482,+ | |||
}} | }} |
Latest revision as of 17:14, 29 July 2015
Short description: | p@chr3:152881467..152881482, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:152881467..152881482, + |
Coexpression cluster: | C4296_Monocytederived_CD14_Macrophage_ductal_Basophils_cervical_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.32e-25 | 48 |
phagocyte | 5.32e-25 | 48 |
macrophage dendritic cell progenitor | 5.71e-24 | 61 |
monopoietic cell | 9.18e-24 | 59 |
monocyte | 9.18e-24 | 59 |
monoblast | 9.18e-24 | 59 |
promonocyte | 9.18e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-21 | 66 |
classical monocyte | 3.87e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-21 | 42 |
granulocyte monocyte progenitor cell | 6.87e-20 | 67 |
myeloid leukocyte | 1.91e-18 | 72 |
myeloid cell | 4.31e-16 | 108 |
common myeloid progenitor | 4.31e-16 | 108 |
nongranular leukocyte | 4.15e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 9.19e-13 | 120 |
epithelial cell | 1.69e-12 | 253 |
leukocyte | 7.61e-11 | 136 |
hematopoietic oligopotent progenitor cell | 8.09e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.09e-11 | 161 |
hematopoietic cell | 2.16e-10 | 177 |
hematopoietic stem cell | 3.54e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.89e-19 | 108 |
hematopoietic system | 7.48e-19 | 98 |
blood island | 7.48e-19 | 98 |
bone marrow | 1.09e-18 | 76 |
skeletal element | 3.67e-17 | 90 |
bone element | 5.24e-17 | 82 |
immune system | 9.27e-16 | 93 |
skeletal system | 7.06e-14 | 100 |
lateral plate mesoderm | 4.33e-11 | 203 |
musculoskeletal system | 1.04e-08 | 167 |