FFCP PHASE1:Hg19::chr3:183596069..183596083,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:183596069..183596083,- | |||
|coexpression_cluster_id=C822 | |coexpression_cluster_id=C822 | ||
|description=CAGE_peak_at_chr3:183596069..183596083,- | |description=CAGE_peak_at_chr3:183596069..183596083,- | ||
|id=chr3:183596069..183596083,- | |id=chr3:183596069..183596083,- | ||
|ontology_enrichment_celltype=CL:0000763!8.33e-58!112;CL:0000049!8.33e-58!112;CL:0000766!1.34e-48!76;CL:0002194!2.78e-46!63;CL:0000576!2.78e-46!63;CL:0000040!2.78e-46!63;CL:0000559!2.78e-46!63;CL:0000839!2.55e-45!70;CL:0002009!1.55e-44!65;CL:0000557!4.02e-42!71;CL:0000037!2.64e-38!172;CL:0000566!2.64e-38!172;CL:0000988!2.49e-35!182;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0000738!8.63e-25!140;CL:0002057!4.06e-24!42;CL:0002087!1.66e-23!119;CL:0000860!4.48e-22!45;CL:0002031!8.61e-21!124;CL:0000134!4.73e-11!358;CL:0002320!1.49e-10!365;CL:0000235!3.74e-09!10;CL:0002619!4.93e-09!3;CL:0000219!8.13e-09!390;CL:0000767!3.87e-08!3;CL:0000842!2.50e-07!3;CL:0000048!2.78e-07!430;CL:0000034!4.42e-07!444;CL:0000723!5.50e-07!436 | |ontology_enrichment_celltype=CL:0000763!8.33e-58!112;CL:0000049!8.33e-58!112;CL:0000766!1.34e-48!76;CL:0002194!2.78e-46!63;CL:0000576!2.78e-46!63;CL:0000040!2.78e-46!63;CL:0000559!2.78e-46!63;CL:0000839!2.55e-45!70;CL:0002009!1.55e-44!65;CL:0000557!4.02e-42!71;CL:0000037!2.64e-38!172;CL:0000566!2.64e-38!172;CL:0000988!2.49e-35!182;CL:0002032!2.17e-34!165;CL:0000837!2.17e-34!165;CL:0000738!8.63e-25!140;CL:0002057!4.06e-24!42;CL:0002087!1.66e-23!119;CL:0000860!4.48e-22!45;CL:0002031!8.61e-21!124;CL:0000134!4.73e-11!358;CL:0002320!1.49e-10!365;CL:0000235!3.74e-09!10;CL:0002619!4.93e-09!3;CL:0000219!8.13e-09!390;CL:0000767!3.87e-08!3;CL:0000842!2.50e-07!3;CL:0000048!2.78e-07!430;CL:0000034!4.42e-07!444;CL:0000723!5.50e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.84e-31;6!CL:0002619;2.65e-23;3!CL:0000766;1.13e-10;69!CL:0000763;2.06e-10;100!CL:0000473;4.29e-07;39!CL:0000234;4.29e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.83e-31,6;CL:0000763,4.07e-29,108;CL:0000049,4.07e-29,108;CL:0002619,2.28e-23,3;CL:0002194,1.14e-21,59;CL:0000576,1.14e-21,59;CL:0000040,1.14e-21,59;CL:0000559,1.14e-21,59;CL:0002009,6.89e-21,61;CL:0000766,4.23e-20,72;CL:0000839,3.90e-19,66;CL:0000557,8.13e-19,67;CL:0002032,2.59e-18,161;CL:0000837,2.59e-18,161;CL:0000037,2.16e-17,168;CL:0000988,2.60e-16,177;CL:0002087,5.89e-10,115;CL:0002031,1.94e-09,120;CL:0000738,2.13e-09,136;CL:0000473,9.27e-07,48;CL:0000234,9.27e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000049;2.56e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!4.19e-17!31;DOID:1240!1.03e-12!39;DOID:2531!9.20e-09!51;DOID:0060083!9.20e-09!51 | |ontology_enrichment_disease=DOID:8692!4.19e-17!31;DOID:1240!1.03e-12!39;DOID:2531!9.20e-09!51;DOID:0060083!9.20e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.94e-21;31!DOID:1240;1.60e-14;39!DOID:225;3.06e-09;1!DOID:2531;1.69e-08;51!DOID:0060083;1.69e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.00e-22,31;DOID:1240,1.71e-17,39;DOID:2531,5.42e-13,51;DOID:0060083,5.42e-13,51;DOID:225,3.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.94e-42!102;UBERON:0003061!1.94e-42!102;UBERON:0002193!2.02e-41!112;UBERON:0002371!2.65e-38!80;UBERON:0001474!7.38e-35!86;UBERON:0002405!4.97e-31!115;UBERON:0004765!4.88e-28!101;UBERON:0001434!4.88e-28!101;UBERON:0003081!6.28e-16!216;UBERON:0002204!1.52e-14!167;UBERON:0002384!7.05e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!1.94e-42!102;UBERON:0003061!1.94e-42!102;UBERON:0002193!2.02e-41!112;UBERON:0002371!2.65e-38!80;UBERON:0001474!7.38e-35!86;UBERON:0002405!4.97e-31!115;UBERON:0004765!4.88e-28!101;UBERON:0001434!4.88e-28!101;UBERON:0003081!6.28e-16!216;UBERON:0002204!1.52e-14!167;UBERON:0002384!7.05e-10!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.89e-16,108;UBERON:0002371,2.59e-16,76;UBERON:0002390,3.63e-16,98;UBERON:0003061,3.63e-16,98;UBERON:0002405,5.95e-15,93;UBERON:0001474,6.03e-15,82;UBERON:0004765,2.10e-13,90;UBERON:0001434,8.07e-12,100;UBERON:0000029,1.13e-08,1 | |||
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| ||
|short_description=p@chr3:183596069..183596083,- | |short_description=p@chr3:183596069..183596083,- | ||
}} | }} |
Latest revision as of 18:47, 29 July 2015
Short description: | p@chr3:183596069..183596083, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:183596069..183596083, - |
Coexpression cluster: | C822_myelodysplastic_acute_Macrophage_Monocytederived_CD14_biphenotypic_Hodgkin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.83e-31 | 6 |
myeloid cell | 4.07e-29 | 108 |
common myeloid progenitor | 4.07e-29 | 108 |
adult endothelial progenitor cell | 2.28e-23 | 3 |
monopoietic cell | 1.14e-21 | 59 |
monocyte | 1.14e-21 | 59 |
monoblast | 1.14e-21 | 59 |
promonocyte | 1.14e-21 | 59 |
macrophage dendritic cell progenitor | 6.89e-21 | 61 |
myeloid leukocyte | 4.23e-20 | 72 |
myeloid lineage restricted progenitor cell | 3.90e-19 | 66 |
granulocyte monocyte progenitor cell | 8.13e-19 | 67 |
hematopoietic oligopotent progenitor cell | 2.59e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-18 | 161 |
hematopoietic stem cell | 2.16e-17 | 168 |
hematopoietic cell | 2.60e-16 | 177 |
nongranular leukocyte | 5.89e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.94e-09 | 120 |
leukocyte | 2.13e-09 | 136 |
defensive cell | 9.27e-07 | 48 |
phagocyte | 9.27e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.89e-16 | 108 |
bone marrow | 2.59e-16 | 76 |
hematopoietic system | 3.63e-16 | 98 |
blood island | 3.63e-16 | 98 |
immune system | 5.95e-15 | 93 |
bone element | 6.03e-15 | 82 |
skeletal element | 2.10e-13 | 90 |
skeletal system | 8.07e-12 | 100 |
lymph node | 1.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.00e-22 | 31 |
leukemia | 1.71e-17 | 39 |
hematologic cancer | 5.42e-13 | 51 |
immune system cancer | 5.42e-13 | 51 |
syndrome | 3.06e-09 | 1 |