FFCP PHASE1:Hg19::chr3:39194422..39194451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:39194422..39194451,+ | |||
|coexpression_cluster_id=C1831 | |coexpression_cluster_id=C1831 | ||
|description=CAGE_peak_at_chr3:39194422..39194451,+ | |description=CAGE_peak_at_chr3:39194422..39194451,+ | ||
|id=chr3:39194422..39194451,+ | |id=chr3:39194422..39194451,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.53e-36!42;CL:0000860!2.24e-32!45;CL:0000738!1.31e-30!140;CL:0000766!7.55e-27!76;CL:0000037!9.42e-23!172;CL:0000566!9.42e-23!172;CL:0000557!1.69e-22!71;CL:0002031!1.74e-21!124;CL:0002087!2.30e-21!119;CL:0000988!4.39e-21!182;CL:0002009!1.00e-20!65;CL:0002032!5.00e-20!165;CL:0000837!5.00e-20!165;CL:0002194!2.02e-19!63;CL:0000576!2.02e-19!63;CL:0000040!2.02e-19!63;CL:0000559!2.02e-19!63;CL:0000839!2.58e-19!70;CL:0000763!1.52e-17!112;CL:0000049!1.52e-17!112;CL:0000094!5.01e-09!8;CL:0002393!5.60e-08!9;CL:0002397!5.60e-08!9;CL:0000081!2.41e-07!11;CL:0000624!7.65e-07!6 | |ontology_enrichment_celltype=CL:0002057!4.53e-36!42;CL:0000860!2.24e-32!45;CL:0000738!1.31e-30!140;CL:0000766!7.55e-27!76;CL:0000037!9.42e-23!172;CL:0000566!9.42e-23!172;CL:0000557!1.69e-22!71;CL:0002031!1.74e-21!124;CL:0002087!2.30e-21!119;CL:0000988!4.39e-21!182;CL:0002009!1.00e-20!65;CL:0002032!5.00e-20!165;CL:0000837!5.00e-20!165;CL:0002194!2.02e-19!63;CL:0000576!2.02e-19!63;CL:0000040!2.02e-19!63;CL:0000559!2.02e-19!63;CL:0000839!2.58e-19!70;CL:0000763!1.52e-17!112;CL:0000049!1.52e-17!112;CL:0000094!5.01e-09!8;CL:0002393!5.60e-08!9;CL:0002397!5.60e-08!9;CL:0000081!2.41e-07!11;CL:0000624!7.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.51e-61;33!CL:0002057;6.51e-61;33!CL:0000473;1.04e-41;39!CL:0000234;1.04e-41;39!CL:0000576;7.96e-35;48!CL:0000766;1.38e-30;69!CL:0000094;6.63e-21;8!CL:0002087;1.16e-16;104!CL:0000624;2.95e-15;6!CL:0000081;9.14e-15;11!CL:0000763;9.23e-15;100!CL:0000738;3.13e-13;136!CL:0000791;7.24e-10;18!CL:0000789;7.24e-10;18!CL:0002419;7.24e-10;18!CL:0000775;3.27e-09;3!CL:0000623;1.47e-08;3!CL:0000898;2.48e-08;3!CL:0000988;3.41e-08;177!CL:0000767;3.76e-08;3!CL:0002393;1.61e-07;6!CL:0002397;1.61e-07;6!CL:0000771;5.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.12e-66,42;CL:0002057,5.12e-66,42;CL:0000766,1.35e-63,72;CL:0000738,2.44e-60,136;CL:0000473,1.78e-56,48;CL:0000234,1.78e-56,48;CL:0000557,5.88e-50,67;CL:0000037,8.55e-48,168;CL:0002032,7.27e-47,161;CL:0000837,7.27e-47,161;CL:0002031,2.57e-46,120;CL:0000839,3.59e-45,66;CL:0000988,1.44e-44,177;CL:0002087,1.67e-44,115;CL:0002009,3.29e-44,61;CL:0002194,3.89e-43,59;CL:0000576,3.89e-43,59;CL:0000040,3.89e-43,59;CL:0000559,3.89e-43,59;CL:0000763,1.54e-42,108;CL:0000049,1.54e-42,108;CL:0000094,6.50e-21,8;CL:0000624,2.89e-15,6;CL:0000081,9.00e-15,11;CL:0000134,1.82e-14,354;CL:0002320,6.88e-14,361;CL:0000219,7.36e-12,386;CL:0000791,7.64e-10,18;CL:0000789,7.64e-10,18;CL:0002420,7.64e-10,18;CL:0002419,7.64e-10,18;CL:0000790,7.64e-10,18;CL:0000034,8.12e-10,441;CL:0000048,2.11e-09,427;CL:0000775,3.06e-09,3;CL:0000723,4.58e-09,433;CL:0000623,1.24e-08,3;CL:0000825,1.24e-08,3;CL:0000898,3.04e-08,3;CL:0000767,4.01e-08,3;CL:0000771,5.79e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-48;42!CL:0000049;7.16e-12;108!CL:0000790;7.24e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.54e-19!80;UBERON:0002390!3.48e-18!102;UBERON:0003061!3.48e-18!102;UBERON:0001474!5.97e-18!86;UBERON:0002193!6.98e-17!112;UBERON:0002405!4.49e-14!115;UBERON:0004765!1.67e-12!101;UBERON:0001434!1.67e-12!101;UBERON:0003081!4.33e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!7.54e-19!80;UBERON:0002390!3.48e-18!102;UBERON:0003061!3.48e-18!102;UBERON:0001474!5.97e-18!86;UBERON:0002193!6.98e-17!112;UBERON:0002405!4.49e-14!115;UBERON:0004765!1.67e-12!101;UBERON:0001434!1.67e-12!101;UBERON:0003081!4.33e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.80e-43,76;UBERON:0001474,7.22e-39,82;UBERON:0002390,2.14e-36,98;UBERON:0003061,2.14e-36,98;UBERON:0002405,5.84e-35,93;UBERON:0004765,1.85e-34,90;UBERON:0002193,5.79e-32,108;UBERON:0001434,6.13e-30,100;UBERON:0002204,9.85e-14,167;UBERON:0002384,4.22e-13,371;UBERON:0003081,1.33e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0,0,3.14691421479123,1.53531759238885,3.2511385896376,0,0.30120591877825,0,0.0774672005803016,0,0.880801318004542,9.97191735357379,9.42558903109666,9.33146744078163,0,0,0,1.16318591023652,1.13362783106643,0.242584061187816,3.0215774797739,4.52284676824008,2.78735733805593,6.04154023876516,4.86705342405291,4.7296445977717,11.3766074643084,3.22742341791913,9.47985406160392,1.69418105588344,1.36453075028923,0.898893937780338,4.59125838556354,1.92557416245656,3.19668562899521,1.31940520074686,2.19410023383795,2.13112375266347,4.06292934080018,3.40431134814684,4.9825779919646,10.0499466102697,9.90817544998383,4.12658804939722,2.42159801053347,4.78760926783834,3.16462387440884,0.845021145247767,1.06302149982522,0.628975936525128,1.12328631146495,1.20141514273205,1.12507910687956,0.570025487482497,0.59675003159727,0.182664153764634,1.75996244461323,0,0,0.426730222566507,0,0,0,0,3.41527781465669,0,0.764546456250458,2.64342657158052,2.24203425192614,0.526768169550154,1.7703879310245,5.89516144123747,8.42966145897988,0,4.23698946623668,1.89379122293893,5.84480185223734,0.222820913770347,2.06224135232386,1.99380505125259,1.35401931882508,0.25618263945135,1.43065282315866,0.164437904603676,0,0,1.4828656316206,1.33770414044857,2.09071047609954,0.226618685395132,2.29932296161153,3.77990190030893,0.759059076058509,0.637130828648193,0,0,0.451725357233318,0.127986611154418,0,0,0,1.20964045934839,2.67440195783507,3.04131248153878,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,12.312033096785,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,11.8602375692457,11.6334079244498,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0,0.539325232640658,0.196221465125346,1.53898862778556,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0,0,0,0,3.31724984865235,1.58531948758658,2.65109110195398,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,5.60631694634745,3.85029108839245,0,0,0,0,0.637938751653163,6.74106321552464,5.9832291840805,6.63064821497657,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,1.60091336705167,1.21251028578504,0,0.604780586659361,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.439524537815682,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.493217028184668,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0.611030144933625,0.889563386041866,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.60129367765797,0.103688191397247,0.664653872707185,0,0,0,0,0,0.173559738335131,0,0.174118413160805,0.17472666824203,0,0,0,0,0,0.353024506766001,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0.707082103850386,0,0.104602846312333,0,0.288950589901519,0,0,3.83239764200917,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.449947783103001,3.86900977278975,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.383830394638891,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0.531459361253452,0,0,0,0.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| ||
|short_description=p@chr3:39194422..39194451,+ | |short_description=p@chr3:39194422..39194451,+ | ||
}} | }} |
Latest revision as of 20:49, 29 July 2015
Short description: | p@chr3:39194422..39194451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:39194422..39194451, + |
Coexpression cluster: | C1831_testis_Eosinophils_CD14_Neutrophils_Basophils_Whole_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.80e-43 | 76 |
bone element | 7.22e-39 | 82 |
hematopoietic system | 2.14e-36 | 98 |
blood island | 2.14e-36 | 98 |
immune system | 5.84e-35 | 93 |
skeletal element | 1.85e-34 | 90 |
hemolymphoid system | 5.79e-32 | 108 |
skeletal system | 6.13e-30 | 100 |
musculoskeletal system | 9.85e-14 | 167 |
connective tissue | 4.22e-13 | 371 |
lateral plate mesoderm | 1.33e-12 | 203 |