FFCP PHASE1:Hg19::chr4:118246646..118246668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:118246646..118246668,+ | |||
|coexpression_cluster_id=C2774 | |coexpression_cluster_id=C2774 | ||
|description=CAGE_peak_at_chr4:118246646..118246668,+ | |description=CAGE_peak_at_chr4:118246646..118246668,+ | ||
|id=chr4:118246646..118246668,+ | |id=chr4:118246646..118246668,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.48e-15!254;CL:1000507!4.03e-10!12;CL:1000494!4.03e-10!12;CL:0002166!3.24e-09!3;CL:0002621!8.81e-09!3;CL:1000497!2.20e-08!18;CL:0002518!2.20e-08!18;CL:0000064!3.99e-08!3;CL:0005012!3.99e-08!3;CL:0000067!3.99e-08!3;CL:0002304!3.99e-08!3;CL:0000223!2.11e-07!59;CL:1000449!2.58e-07!16;CL:0002681!9.18e-07!13;CL:0002584!9.18e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.48e-15!254;CL:1000507!4.03e-10!12;CL:1000494!4.03e-10!12;CL:0002166!3.24e-09!3;CL:0002621!8.81e-09!3;CL:1000497!2.20e-08!18;CL:0002518!2.20e-08!18;CL:0000064!3.99e-08!3;CL:0005012!3.99e-08!3;CL:0000067!3.99e-08!3;CL:0002304!3.99e-08!3;CL:0000223!2.11e-07!59;CL:1000449!2.58e-07!16;CL:0002681!9.18e-07!13;CL:0002584!9.18e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.69e-08;1!CL:1000600;3.69e-08;1!CL:0002568;3.69e-08;1!CL:0000306;5.93e-08;4!CL:0002222;5.93e-08;4!CL:0002224;5.93e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.33e-08,1;CL:1000600,2.33e-08,1;CL:0002568,2.69e-08,1;CL:0000306,5.08e-08,4;CL:0002222,5.08e-08,4;CL:0002224,5.08e-08,4;CL:0000066,4.71e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!9.49e-22!27;DOID:193!5.93e-20!29;DOID:2394!6.23e-18!14;DOID:162!1.59e-08!235;DOID:305!3.65e-08!106;DOID:14566!3.78e-08!239;DOID:0050687!2.67e-07!143 | |ontology_enrichment_disease=DOID:120!9.49e-22!27;DOID:193!5.93e-20!29;DOID:2394!6.23e-18!14;DOID:162!1.59e-08!235;DOID:305!3.65e-08!106;DOID:14566!3.78e-08!239;DOID:0050687!2.67e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.41e-12;14!DOID:120;9.38e-12;27!DOID:193;6.91e-11;29!DOID:5662;3.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.73e-12,14;DOID:120,8.42e-12,27;DOID:193,6.25e-11,29;DOID:5662,2.17e-08,1;DOID:162,5.88e-07,235;DOID:14566,9.76e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.59e-10!4;UBERON:0009773!4.03e-10!12;UBERON:0001231!4.03e-10!12;UBERON:0004810!4.03e-10!12;UBERON:0000058!4.18e-10!26;UBERON:0003100!2.39e-09!41;UBERON:0000992!2.80e-09!13;UBERON:0003886!2.93e-09!63;UBERON:0001949!8.81e-09!3;UBERON:0000076!1.99e-08!8;UBERON:0007625!2.80e-08!11;UBERON:0001778!3.99e-08!3;UBERON:0001775!3.99e-08!3;UBERON:0002553!6.61e-08!70;UBERON:0000464!1.47e-07!104;UBERON:0000466!1.77e-07!126;UBERON:0004211!2.58e-07!16;UBERON:0001285!2.58e-07!16;UBERON:0007684!2.58e-07!16;UBERON:0003220!2.58e-07!16;UBERON:0004208!2.58e-07!16;UBERON:0002203!5.10e-07!6;UBERON:0001768!5.10e-07!6;UBERON:0001708!5.47e-07!4;UBERON:0001704!5.47e-07!4;UBERON:0006555!8.03e-07!17;UBERON:0005103!8.03e-07!17;UBERON:0000083!8.03e-07!17;UBERON:0009201!8.03e-07!17;UBERON:0004819!8.03e-07!17;UBERON:0006553!8.03e-07!17;UBERON:0003074!8.03e-07!17;UBERON:0003060!8.03e-07!17;UBERON:0001225!9.18e-07!13;UBERON:0008987!9.18e-07!13 | |ontology_enrichment_uberon=UBERON:0000488!1.59e-10!4;UBERON:0009773!4.03e-10!12;UBERON:0001231!4.03e-10!12;UBERON:0004810!4.03e-10!12;UBERON:0000058!4.18e-10!26;UBERON:0003100!2.39e-09!41;UBERON:0000992!2.80e-09!13;UBERON:0003886!2.93e-09!63;UBERON:0001949!8.81e-09!3;UBERON:0000076!1.99e-08!8;UBERON:0007625!2.80e-08!11;UBERON:0001778!3.99e-08!3;UBERON:0001775!3.99e-08!3;UBERON:0002553!6.61e-08!70;UBERON:0000464!1.47e-07!104;UBERON:0000466!1.77e-07!126;UBERON:0004211!2.58e-07!16;UBERON:0001285!2.58e-07!16;UBERON:0007684!2.58e-07!16;UBERON:0003220!2.58e-07!16;UBERON:0004208!2.58e-07!16;UBERON:0002203!5.10e-07!6;UBERON:0001768!5.10e-07!6;UBERON:0001708!5.47e-07!4;UBERON:0001704!5.47e-07!4;UBERON:0006555!8.03e-07!17;UBERON:0005103!8.03e-07!17;UBERON:0000083!8.03e-07!17;UBERON:0009201!8.03e-07!17;UBERON:0004819!8.03e-07!17;UBERON:0006553!8.03e-07!17;UBERON:0003074!8.03e-07!17;UBERON:0003060!8.03e-07!17;UBERON:0001225!9.18e-07!13;UBERON:0008987!9.18e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.69e-08;1!UBERON:0001256;3.69e-08;1!UBERON:0001259;3.69e-08;1!UBERON:0010077;5.93e-08;4!UBERON:0005389;5.93e-08;4!UBERON:0000484;5.93e-08;4!UBERON:0000965;5.93e-08;4!UBERON:0001803;5.93e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,2.31e-08,8;UBERON:0004645,2.33e-08,1;UBERON:0001256,2.33e-08,1;UBERON:0001259,2.33e-08,1;UBERON:0010077,5.08e-08,4;UBERON:0005389,5.08e-08,4;UBERON:0000484,5.08e-08,4;UBERON:0002546,5.08e-08,4;UBERON:0000965,5.08e-08,4;UBERON:0001803,5.08e-08,4;UBERON:0003073,5.08e-08,4;UBERON:0005426,5.08e-08,4 | |||
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| ||
|short_description=p@chr4:118246646..118246668,+ | |short_description=p@chr4:118246646..118246668,+ | ||
}} | }} |
Latest revision as of 01:11, 30 July 2015
Short description: | p@chr4:118246646..118246668, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:118246646..118246668, + |
Coexpression cluster: | C2774_anaplastic_Mallassezderived_astrocytoma_gall_mesenchymal_alveolar_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.33e-08 | 1 |
lower urinary tract cell | 2.33e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.69e-08 | 1 |
crystallin accumulating cell | 5.08e-08 | 4 |
vertebrate lens cell | 5.08e-08 | 4 |
lens epithelial cell | 5.08e-08 | 4 |
epithelial cell | 4.71e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 2.31e-08 | 8 |
urinary bladder urothelium | 2.33e-08 | 1 |
wall of urinary bladder | 2.33e-08 | 1 |
mucosa of urinary bladder | 2.33e-08 | 1 |
cuboidal epithelium | 5.08e-08 | 4 |
transparent eye structure | 5.08e-08 | 4 |
simple cuboidal epithelium | 5.08e-08 | 4 |
cranial placode | 5.08e-08 | 4 |
lens of camera-type eye | 5.08e-08 | 4 |
epithelium of lens | 5.08e-08 | 4 |
lens placode | 5.08e-08 | 4 |
lens vesicle | 5.08e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.73e-12 | 14 |
female reproductive organ cancer | 8.42e-12 | 27 |
reproductive organ cancer | 6.25e-11 | 29 |
pleomorphic carcinoma | 2.17e-08 | 1 |
cancer | 5.88e-07 | 235 |
disease of cellular proliferation | 9.76e-07 | 239 |