FFCP PHASE1:Hg19::chr4:127876527..127876545,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000515428_5end | |association_with_transcript=15bp_to_ENST00000515428_5end | ||
|cluster_id=chr4:127876527..127876545,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_2_at_ENST00000515428_5end | |description=CAGE_peak_2_at_ENST00000515428_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!1.40e-27!23;CL:0002590!5.63e-11!3 | |ontology_enrichment_celltype=CL:0002620!1.40e-27!23;CL:0002590!5.63e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.48e-25;23!CL:0002551;3.71e-09;6!CL:1000415;1.12e-07;2!CL:0000057;9.67e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;1.48e-25;23!CL:0002551;3.71e-09;6!CL:1000415;1.12e-07;2!CL:0000057;9.67e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.69e-25,23;CL:0002551,4.03e-09,6;CL:1000415,1.12e-07,2;CL:0000057,2.48e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.52e-12!5;DOID:450!3.52e-12!5;DOID:66!3.52e-12!5;DOID:423!3.52e-12!5;DOID:0080000!3.52e-12!5;DOID:11722!3.52e-12!5;DOID:1036!6.30e-12!8 | |ontology_enrichment_disease=DOID:17!3.52e-12!5;DOID:450!3.52e-12!5;DOID:66!3.52e-12!5;DOID:423!3.52e-12!5;DOID:0080000!3.52e-12!5;DOID:11722!3.52e-12!5;DOID:1036!6.30e-12!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;3.09e-39;8!DOID:17;1.03e-22;5!DOID:450;1.03e-22;5!DOID:66;1.03e-22;5!DOID:423;1.03e-22;5!DOID:0080000;1.03e-22;5!DOID:11722;1.03e-22;5!DOID:8692;1.77e-10;31!DOID:1240;2.02e-07;39 | |ontology_enrichment_disease_v019=DOID:1036;3.09e-39;8!DOID:17;1.03e-22;5!DOID:450;1.03e-22;5!DOID:66;1.03e-22;5!DOID:423;1.03e-22;5!DOID:0080000;1.03e-22;5!DOID:11722;1.03e-22;5!DOID:8692;1.77e-10;31!DOID:1240;2.02e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.17e-39,8;DOID:17,1.24e-22,5;DOID:450,1.24e-22,5;DOID:66,1.24e-22,5;DOID:423,1.24e-22,5;DOID:0080000,1.24e-22,5;DOID:11722,1.24e-22,5;DOID:8692,3.55e-10,31;DOID:1240,4.55e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.77e-22!40;UBERON:0002199!4.86e-19!45;UBERON:0002416!4.86e-19!45;UBERON:0003102!6.96e-07!95;UBERON:0005284!9.57e-07!5 | |ontology_enrichment_uberon=UBERON:0002097!5.77e-22!40;UBERON:0002199!4.86e-19!45;UBERON:0002416!4.86e-19!45;UBERON:0003102!6.96e-07!95;UBERON:0005284!9.57e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.23e-14;41!UBERON:0002067;6.51e-13;9!UBERON:0002199;1.17e-12;46!UBERON:0002416;1.17e-12;46!UBERON:0003102;3.29e-11;50 | |ontology_enrichment_uberon_v019=UBERON:0002097;4.23e-14;41!UBERON:0002067;6.51e-13;9!UBERON:0002199;1.17e-12;46!UBERON:0002416;1.17e-12;46!UBERON:0003102;3.29e-11;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.58e-18,41;UBERON:0002199,3.04e-16,46;UBERON:0002416,3.04e-16,46;UBERON:0002067,7.52e-13,9;UBERON:0004016,7.52e-13,9;UBERON:0010083,7.52e-13,9;UBERON:0003102,4.10e-07,99 | |||
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| ||
|short_description=p2@ENST00000515428 | |short_description=p2@ENST00000515428 | ||
}} | }} |
Latest revision as of 01:29, 30 July 2015
Short description: | p2@ENST00000515428 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000515428_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 15bp_to_ENST00000515428_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.69e-25 | 23 |
fibroblast of dermis | 4.03e-09 | 6 |
epithelial cell of gall bladder | 1.12e-07 | 2 |
fibroblast | 2.48e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.58e-18 | 41 |
integument | 3.04e-16 | 46 |
integumental system | 3.04e-16 | 46 |
dermis | 7.52e-13 | 9 |
dermatome | 7.52e-13 | 9 |
future dermis | 7.52e-13 | 9 |
surface structure | 4.10e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.17e-39 | 8 |
musculoskeletal system disease | 1.24e-22 | 5 |
myotonic disease | 1.24e-22 | 5 |
muscle tissue disease | 1.24e-22 | 5 |
myopathy | 1.24e-22 | 5 |
muscular disease | 1.24e-22 | 5 |
myotonic dystrophy | 1.24e-22 | 5 |
myeloid leukemia | 3.55e-10 | 31 |
leukemia | 4.55e-08 | 39 |