FFCP PHASE1:Hg19::chr4:174427862..174427899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:174427862..174427899,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_at_chr4:174427862..174427899,+ | |description=CAGE_peak_at_chr4:174427862..174427899,+ | ||
|id=chr4:174427862..174427899,+ | |id=chr4:174427862..174427899,+ | ||
|ontology_enrichment_celltype=CL:0002569!1.17e-16!6;CL:0002588!2.47e-12!2;CL:0002603!1.24e-08!3;CL:0002568!2.84e-07!1 | |ontology_enrichment_celltype=CL:0002569!1.17e-16!6;CL:0002588!2.47e-12!2;CL:0002603!1.24e-08!3;CL:0002568!2.84e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002569;9.49e-20;6!CL:0000333;4.79e-07;5!CL:0000349;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,7.13e-20,6;CL:0000349,6.01e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.98e-30;1!UBERON:0004140;2.37e-29;1 | |||
|ontology_enrichment_disease=DOID:630!2.37e-07!1;DOID:0050177!2.37e-07!1;DOID:0050427!2.37e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;2.05e-15;2!DOID:1287;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.05e-15,2;DOID:1287,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003422!1.17e-16!6;UBERON:0002331!2.45e-15!10;UBERON:0000358!2.45e-15!10;UBERON:0000307!2.45e-15!10;UBERON:0000091!2.45e-15!10;UBERON:0000087!2.45e-15!10;UBERON:0007806!2.45e-15!10;UBERON:0008780!2.45e-15!10;UBERON:0005728!2.45e-15!10;UBERON:0000478!9.63e-09!24;UBERON:0002084!1.74e-07!1;UBERON:0002082!1.74e-07!1;UBERON:0004706!1.74e-07!1 | |ontology_enrichment_uberon=UBERON:0003422!1.17e-16!6;UBERON:0002331!2.45e-15!10;UBERON:0000358!2.45e-15!10;UBERON:0000307!2.45e-15!10;UBERON:0000091!2.45e-15!10;UBERON:0000087!2.45e-15!10;UBERON:0007806!2.45e-15!10;UBERON:0008780!2.45e-15!10;UBERON:0005728!2.45e-15!10;UBERON:0000478!9.63e-09!24;UBERON:0002084!1.74e-07!1;UBERON:0002082!1.74e-07!1;UBERON:0004706!1.74e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.27e-26;10!UBERON:0003422;9.49e-20;6!UBERON:0003104;4.36e-17;7!UBERON:0009142;4.36e-17;7!UBERON:0000478;2.43e-11;24!UBERON:0000013;4.79e-07;5!UBERON:0002410;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.30e-26,10;UBERON:0000358,3.30e-26,10;UBERON:0000307,3.30e-26,10;UBERON:0000091,3.30e-26,10;UBERON:0000087,3.30e-26,10;UBERON:0007010,3.30e-26,10;UBERON:0007806,3.30e-26,10;UBERON:0008780,3.30e-26,10;UBERON:0005728,3.30e-26,10;UBERON:0003422,7.13e-20,6;UBERON:0000478,2.19e-11,24;UBERON:0000013,4.79e-07,5;UBERON:0002410,4.79e-07,5 | |||
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|short_description=p@chr4:174427862..174427899,+ | |short_description=p@chr4:174427862..174427899,+ | ||
}} | }} |
Latest revision as of 03:24, 30 July 2015
Short description: | p@chr4:174427862..174427899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:174427862..174427899, + |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 7.13e-20 | 6 |
extraembryonic cell | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.30e-26 | 10 |
blastocyst | 3.30e-26 | 10 |
blastula | 3.30e-26 | 10 |
bilaminar disc | 3.30e-26 | 10 |
inner cell mass | 3.30e-26 | 10 |
cleaving embryo | 3.30e-26 | 10 |
connecting stalk | 3.30e-26 | 10 |
inner cell mass derived epiblast | 3.30e-26 | 10 |
extraembryonic mesoderm | 3.30e-26 | 10 |
mesenchyme of umbilical cord | 7.13e-20 | 6 |
extraembryonic structure | 2.19e-11 | 24 |
sympathetic nervous system | 4.79e-07 | 5 |
autonomic nervous system | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.05e-15 | 2 |
cardiovascular system disease | 2.26e-08 | 4 |