FFCP PHASE1:Hg19::chr4:80980200..80980218,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:80980200..80980218,+ | |||
|coexpression_cluster_id=C1438 | |||
|description=CAGE_peak_at_chr4:80980200..80980218,+ | |||
|id=chr4:80980200..80980218,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.33e-44!140;CL:0000037!5.66e-43!172;CL:0000566!5.66e-43!172;CL:0000988!4.33e-41!182;CL:0002032!1.63e-37!165;CL:0000837!1.63e-37!165;CL:0002087!1.13e-36!119;CL:0002031!5.80e-35!124;CL:0000766!1.21e-20!76;CL:0000542!2.02e-20!53;CL:0000051!2.02e-20!53;CL:0002393!1.89e-19!9;CL:0002397!1.89e-19!9;CL:0002057!2.02e-19!42;CL:0000838!2.96e-19!52;CL:0000860!1.03e-17!45;CL:0000763!2.61e-17!112;CL:0000049!2.61e-17!112;CL:0000839!2.10e-16!70;CL:0000791!3.98e-16!18;CL:0000789!3.98e-16!18;CL:0002420!3.98e-16!18;CL:0002419!3.98e-16!18;CL:0000790!3.98e-16!18;CL:0000557!4.55e-16!71;CL:0000624!6.50e-14!6;CL:0000134!1.65e-13!358;CL:0002194!4.10e-13!63;CL:0000576!4.10e-13!63;CL:0000040!4.10e-13!63;CL:0000559!4.10e-13!63;CL:0002320!6.47e-13!365;CL:0002009!1.60e-12!65;CL:0000034!6.43e-11!444;CL:0000219!7.68e-11!390;CL:0000084!9.31e-11!25;CL:0000827!9.31e-11!25;CL:0000048!1.63e-10!430;CL:0000723!3.99e-10!436;CL:0000767!1.49e-08!3;CL:0000623!2.19e-08!3;CL:0000825!2.19e-08!3;CL:0000898!1.35e-07!3;CL:0000875!1.80e-07!3;CL:0002396!1.80e-07!3;CL:0000236!1.96e-07!14;CL:0002274!2.23e-07!5;CL:0000457!2.23e-07!5;CL:0002191!2.23e-07!5;CL:0000097!2.23e-07!5;CL:0000831!2.23e-07!5;CL:0002028!2.23e-07!5;CL:0000625!5.29e-07!11;CL:0000842!8.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-18;18!CL:0000789;1.04e-18;18!CL:0002419;1.04e-18;18!CL:0000624;2.28e-18;6!CL:0000767;2.51e-15;3!CL:0000623;4.84e-15;3!CL:0000542;1.81e-14;53!CL:0000084;5.02e-13;25!CL:0002393;4.22e-12;6!CL:0002397;4.22e-12;6!CL:0000236;4.87e-12;13!CL:0002087;1.88e-09;104!CL:0000766;2.06e-07;69!CL:0000625;7.77e-07;11!CL:0000898;8.68e-07;3!CL:0000875;8.68e-07;3!CL:0002396;8.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.06e-30,136;CL:0002031,1.43e-26,120;CL:0002087,8.42e-26,115;CL:0000037,3.03e-25,168;CL:0000838,3.71e-24,52;CL:0000542,1.27e-23,53;CL:0000051,1.27e-23,53;CL:0000988,1.40e-23,177;CL:0002032,4.04e-23,161;CL:0000837,4.04e-23,161;CL:0000791,1.03e-18,18;CL:0000789,1.03e-18,18;CL:0002420,1.03e-18,18;CL:0002419,1.03e-18,18;CL:0000790,1.03e-18,18;CL:0000624,1.90e-18,6;CL:0002393,2.87e-17,9;CL:0002397,2.87e-17,9;CL:0000767,2.57e-15,3;CL:0000623,5.44e-15,3;CL:0000825,5.44e-15,3;CL:0000084,4.99e-13,25;CL:0000827,4.99e-13,25;CL:0000236,3.22e-11,14;CL:0000766,1.92e-10,72;CL:0000860,1.55e-08,42;CL:0002057,1.55e-08,42;CL:0000134,5.03e-08,354;CL:0002320,1.00e-07,361;CL:0000473,3.00e-07,48;CL:0000234,3.00e-07,48;CL:0000839,5.32e-07,66;CL:0000557,7.28e-07,67;CL:0000875,7.83e-07,3;CL:0002396,7.83e-07,3;CL:0000625,8.34e-07,11;CL:0000898,9.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-18;18!CL:0000051;1.81e-14;53!CL:0002057;4.78e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.44e-15!102;UBERON:0003061!4.44e-15!102;UBERON:0002371!8.72e-15!80;UBERON:0001474!3.17e-13!86;UBERON:0002193!6.08e-13!112;UBERON:0002384!4.14e-12!375;UBERON:0004765!4.70e-11!101;UBERON:0001434!4.70e-11!101;UBERON:0002405!6.38e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.57e-07,371;UBERON:0002371,5.73e-07,76;UBERON:0002390,9.44e-07,98;UBERON:0003061,9.44e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8341069212226,13.8178583314997,8.3600706590681,0,0,0,0,0.284338464974843,8.22081230137572,2.76997704265939,0.802177789880567,5.4252717678963,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.47296445977717,1.03423704220986,1.29096936716765,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0,0.632924774881769,0.845021145247767,1.27562579979026,2.30624510059213,1.34794357375794,2.25265339262259,0.803627933485401,3.13514018115373,0.39783335439818,1.82664153764634,1.75996244461323,0,0,3.41384178053206,0.400395987036012,1.72425731986345,0,0,8.53819453664173,4.69789751496751,6.49864487812889,14.5388461436928,0,3.95076127162616,1.96709770113833,3.93010762749165,4.5232329779892,0,0.977766799900771,0.473447805734733,0,1.00269411196656,1.17842362989935,1.55073726208535,1.62482318259009,0.640456598628376,1.04047478047903,0.493313713811028,0,0.289803085735052,2.37258501059297,3.47803076516627,0,0.113309342697566,3.83220493601921,12.3705880373747,5.56643322442906,0,0,0,0.602300476311091,0,1.24930726552346,0.236777252044017,0,8.46748321543876,4.01160293675261,5.35850294366356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,5.6206781832615,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2307533315099,5.17506179662842,6.03212270514817,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:80980200..80980218,+ | |||
}} |
Latest revision as of 07:15, 30 July 2015
Short description: | p@chr4:80980200..80980218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:80980200..80980218, + |
Coexpression cluster: | C1438_Basophils_CD8_Eosinophils_Natural_CD34_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.57e-07 | 371 |
bone marrow | 5.73e-07 | 76 |
hematopoietic system | 9.44e-07 | 98 |
blood island | 9.44e-07 | 98 |